KEGG   Ligilactobacillus ruminis: LRC_12030
Entry
LRC_12030         CDS       T01626                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lrm  Ligilactobacillus ruminis
Pathway
lrm02024  Quorum sensing
lrm03060  Protein export
lrm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    LRC_12030
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LRC_12030
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LRC_12030
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lrm02044]
    LRC_12030
Enzymes [BR:lrm01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     LRC_12030
Secretion system [BR:lrm02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   LRC_12030
  Eukaryotic Sec-SRP protein
   LRC_12030
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA AAA_33 nSTAND3 6PF2K GTP_EFTU APS_kinase AAA_31 nSTAND_NTPase5 AAA_30 AAA_17 AAA_28 NACHT DHHA1
Other DBs
NCBI-ProteinID: AEN78462
UniProt: G2SPE9
LinkDB
Position
complement(1250715..1252196)
AA seq 493 aa
MKKWKNKNQEALMAFEGLTERLQNAISKLKRKGKISESDVKEVMREIRLALLEADVNFKV
VKDFVKEVKNRAVGAEVLESLTPAQQIVKIVNEELIKVMGESAVSLNKSKKIPTVIMMVG
LQGAGKTTTAGKLAYKLKKEENARPLMIAADVYRPAAVDQLKTVGKSIDVPVFELGTDVD
PVEIVRQGMKLAEEQKNDYVIIDTAGRLQIDEKLMNELARIKELTHPDEILLTVDSMTGQ
NAVEVAQGFNDTLDVTGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMTALDVFYP
DRMASRILGMGDMLTLIEKAQQDFDQKKAEELADKMRENTFDFNDFIEQMEQVQNMGPIE
DIMKMIPGMANNPALKNVKVDPKDIEHTKAIVYSMTPDEREDPDMLNPSRRRRIAAGSGR
PIQEVNRMIKQFKQMRDMMQKMTNGNFGGMENMFGGGVSGKLAKMSVNRMIKKNKKKKRA
KIKKQKQQKRRKK
NT seq 1482 nt   +upstreamnt  +downstreamnt
ttgaaaaaatggaagaataaaaatcaggaggcccttatggcatttgaaggtttaaccgaa
cgtttgcaaaatgcaatcagcaaactgaaacgaaaaggaaaaattagcgaatcagacgtt
aaggaagtcatgcgcgaaatcaggctcgcactgttggaagccgatgttaattttaaagtc
gtcaaagattttgttaaggaagtcaaaaacagggcggtcggtgcagaagttctcgaaagt
ctgacgccggcacagcaaatagtaaaaatcgtcaatgaagaactgatcaaggttatgggt
gaaagtgccgtttccttgaacaaatccaaaaagattccgacagtcatcatgatggtcgga
cttcaaggtgccggcaaaactactacggcaggaaaacttgcatacaaacttaaaaaagaa
gaaaatgcgcgtcctttgatgattgcagccgacgtctatcgtcctgctgccgtcgatcag
ttgaaaacggtcggaaaaagcatcgatgttcccgtgtttgaactcggcacggacgttgat
ccggttgaaatcgttcgtcaagggatgaaactggctgaagaacaaaaaaatgactatgtg
attattgatacggcaggtcgtttgcagatcgatgaaaagctgatgaacgaacttgcaaga
atcaaagagctgacgcatcctgatgaaattttgctgaccgtcgattcgatgacgggtcaa
aatgcagtggaagttgcacaagggttcaacgatactttggacgtgacaggcgttgttttg
accaaacttgacggtgatacgcgcggcggtgccgcactttccatcagagcggttaccggc
aagccgattaaatttatcggtcaaggcgaaaaaatgacggcacttgacgttttttaccct
gatcgaatggcttcaagaatccttggcatgggcgatatgctgactttgatcgaaaaggct
caacaggattttgatcaaaagaaagcagaagagcttgccgataagatgcgtgaaaacaca
tttgatttcaatgattttattgaacaaatggagcaggtgcagaacatggggccgattgaa
gatatcatgaagatgattcctggaatggccaataatcctgctttgaagaacgttaaggtt
gatccaaaagatattgagcatacgaaagccatcgtctattcgatgacgcctgatgaacgt
gaagatcccgatatgctcaatccaagtcgcagaagaagaattgctgcagggtcgggacga
ccgattcaggaagtaaatcgcatgatcaaacagttcaagcaaatgcgcgatatgatgcaa
aagatgacgaacggaaattttggcggcatggaaaacatgtttggcggcggcgtttcagga
aagcttgcgaaaatgtcagtcaatcgcatgattaaaaagaacaaaaagaagaagcgcgcc
aagattaaaaagcaaaaacaacaaaagagacgcaaaaaataa

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