Labeo rohita (rohu): 127154513
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Entry
127154513 CDS
T09007
Symbol
tnnc2.1
Name
(RefSeq) troponin C, skeletal muscle isoform X1
KO
K12042
troponin C, skeletal muscle
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04020
Calcium signaling pathway
lroh04814
Motor proteins
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127154513 (tnnc2.1)
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127154513 (tnnc2.1)
04820 Cytoskeleton in muscle cells
127154513 (tnnc2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127154513 (tnnc2.1)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
127154513 (tnnc2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
AIF-1
EF-hand_FSTL1
EH
SPARC_Ca_bdg
EF-hand_11
SAPC2_N
EF_EFCAB10_C
Dockerin_1
SPEF2_C
EF-hand_EFHB_C
CDI_toxin_EC869_like
DUF5580_M
EF-hand_STIM1
Motif
Other DBs
NCBI-GeneID:
127154513
NCBI-ProteinID:
XP_050952040
LinkDB
All DBs
Position
23:complement(18515366..18542783)
Genome browser
AA seq
165 aa
AA seq
DB search
MSGEKPTDAQQDARSFLSEEMIAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPTREE
LDAIIEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKTEEELSECFRVFDKNQDGFIDREE
FGEILRATGEPVTEEEINELMADADTNKDGKIDFDEFLKMMENVQ
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggaaaagcccactgatgcccagcaagatgcccgctccttcctgagcgaggaa
atgattgctgagttcaaggctgccttcgacatgttcgacactgatggtggcggtgatatc
agcaccaaggagttgggtaccgtcatgaggatgctgggtcaaaatccaaccagagaggag
ctggatgccatcattgaagaagtagatgaagatggcagtggcactattgactttgaggag
ttcttggtcatgatggtgcagcagctaaaagaagatcaagctggcaagactgaagaggaa
ctatctgaatgcttccgtgtctttgacaagaatcaagatggtttcattgatcgtgaggag
tttggggaaatcttgcgtgcaactggtgagccggtgacagaagaagagataaatgaactc
atggcagatgcagacacaaacaaagatgggaagattgattttgatgagttccttaaaatg
atggagaacgtccagtaa
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integrated database retrieval system
