Labeo rohita (rohu): 127162209
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Entry
127162209 CDS
T09007
Name
(RefSeq) calcium-responsive transactivator-like isoform X1
KO
K15623
protein SSXT
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127162209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127162209
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127162209
GBAF(ncBAF) complex
127162209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
127162209
NCBI-ProteinID:
XP_050960935
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MSVTFSAVRPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPNPNLNIGPGGGGQSLHSQTNMNDSMGTGLPPTSLMQSQMSN
GPSHAPTQQQPSTSMSLPASSHGTGPGYSHSVPTSQGQVAYSSMASRANLNMQSSQVSMM
HQQGTGPHYSSTTAGGQHYQGQQTGIMGQGNQGNSMMSQRPMGSYRAPQQGSAPQYMGQD
EFYGEQYGHAQSSSEPVSQQYYSDGHGEYSYQQSSYGEQSYERPFDESSQHYYEGGNSQY
SQQQTQYQQGSGTHQTFSQQQYPSQAGYSAQPQGYGPGQGGSSQYPQYQQGQSQQYPSYR
SIQPGPAAQSQRSYPFEQGQYGNYQQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttacattttcagctgtgcgtccgagggggaaaggagaggtcacacaacaaacc
atacagaagatgctggatgaaaatcatcacctgatacagtgcatcatggactatcagagc
aaaggcaaaacagctgaatgtacacagtatcagcagattttgcacagaaacttggtctac
ctagcaacgatagcagactctaatcagaatatgcagtctcttttaccagcgcctcccaac
cccaatctaaatataggtccaggtggtggaggtcagtctctgcactctcagactaatatg
aatgatagtatgggcactggcttgccacccacctcactaatgcagagccaaatgagcaat
ggccccagccacgcccccacgcagcagcagcccagcacatccatgagcctgcccgccagc
agccatggcacggggcctgggtacagccactcggtgcctacctctcagggtcaggtggcc
tattcgtccatggcctctcgtgccaacctcaacatgcagtccagccaagtttctatgatg
catcagcaaggcactggaccccattactcgtccaccacagcagggggtcagcattaccag
gggcagcagactggaataatgggacagggaaaccaagggaacagcatgatgtcacaaagg
cccatgggaagttatcgtgccccacagcaaggatcagccccgcagtacatgggccaggac
gagttctacggagagcagtatggacacgctcagagctccagcgagcctgttagccaacag
tattactcagatggtcatggggagtattcctatcagcagtcttcctatggagaacagagt
tatgagagaccctttgacgagtcgtcacaacactattacgaaggcggaaactctcagtac
agccaacagcagacgcagtaccagcagggctctgggacgcaccagacgttcagccaacag
cagtacccgtcccaagccggctacagcgctcaacctcagggatacggtccagggcagggc
ggctcttcccaatatcctcagtatcagcagggccagagtcagcagtacccatcataccgc
tccatacagccaggaccagccgctcagtcacagaggtcctacccttttgaacagggccag
tatggaaactatcagcaataa
DBGET
integrated database retrieval system
