Labeo rohita (rohu): 127167906
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Entry
127167906 CDS
T09007
Symbol
rorab
Name
(RefSeq) nuclear receptor ROR-alpha B isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127167906 (rorab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127167906 (rorab)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127167906 (rorab)
Nuclear receptors [BR:
lroh03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127167906 (rorab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Hera_RBD
Motif
Other DBs
NCBI-GeneID:
127167906
NCBI-ProteinID:
XP_050970269
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Position
7:32557315..32604772
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AA seq
528 aa
AA seq
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MNMESPPEPVTAPRKSVSEADASVEDSPVKLDSKAETDKPAPVRRQSCSSTNKDVSSAKK
THTSQIESIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYSCPRQKSCLIDRTSR
NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQQQEEKVGDDTEKGREP
QTPGEAEPLTPSYALSTNGVTELPDDLSGYVNGQTPEEGKADSAVGGFYLDIQPSPDQSG
LDMDGIKLEPVCDLSSDSGLDQYCCYSNGDSSPPDNDLEHLSENICKSHMETCQYLREEL
QPSNWQTVLQTDLDAYQKKSQEDMWQLCAVKVTEAVQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAYNSQNNTVFFDSKYAGPEVFKALGCDDLISSVFEFAKSLNSLQL
SEDEIGLFSAYVLMSADRSWLQEKTRVEKLQQKIKIALQNLLQKNQRDEGILTKLVCKVS
TVRMLCRRHMEKLSSFRALYPETVHTRFPPLYKELFGSDFEQVLPQEA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggagtctccgccagagcccgtcacggcgccgcgcaagagcgtttctgaagcg
gacgcttcggtggaggacagcccggtgaaactggacagcaaggctgaaaccgacaaacca
gcaccagttcggcggcagagttgctcaagtaccaacaaggatgtgtcttcagcgaagaaa
acacacacatctcagattgagagtattccctgtaaaatctgtggagataaatcatcaggg
attcattatggtgttatcacctgtgagggatgcaagggtttcttcaggaggagtcagcag
ggcactgtgtcatattcatgtcctcggcagaagagctgtctgatcgaccgtaccagcaga
aaccgctgccagcactgtcgcctgcagaaatgcttagcagtgggcatgtcaagagatgct
gtgaagtttggccgaatgtctaagaagcagagggacagtctttttgcagaggttcagaag
caccgtcaacagcagcaggaggagaaagtgggtgatgacacagagaaggggcgggaacct
caaactcctggagaggcggagccactcacaccctcttacgccctgtccaccaatggcgtc
acagagctcccagatgacctcagtggatacgtgaacggtcagaccccagaggagggaaag
gcagattcagcagttggtggattttacctggacattcagccttctccagaccagtcaggt
ctagacatggacggcattaaactagaacctgtgtgtgacctcagctcagactctggctta
gatcaatattgttgctatagcaatggagactcttcacctcctgacaacgacctagaacat
ctgtcagagaacatctgcaagtctcacatggagacgtgccagtatcttcgagaagagcta
cagcccagcaactggcagacagttttacagaccgacctggacgcgtaccaaaagaagtct
caggaggacatgtggcagctgtgtgcggttaaagtcactgaagctgtgcagtacgtggtt
gagtttgccaagcgcattgatggattcatggagctctgtcagaacgatcagatcgtgctg
ctcaaagcaggttctttagaagttgtgttcgtgaggatgtgtcgggcatataactcccag
aacaacactgtcttttttgacagcaagtacgctgggccggaggtcttcaaagcattgggc
tgtgatgatcttatcagctccgtgttcgagtttgcgaagagcctgaactctctacagctc
agtgaagatgagattggcctgttttcagcatacgtgctgatgtctgcagatcgatcctgg
ctgcaggagaagaccagagtggagaaactccagcagaagatcaagattgccctccagaac
ctcctgcagaagaaccagagggatgagggaattctcacaaagcttgtctgtaaagtgtcc
accgttcggatgttatgccgtcgccatatggagaaactgagctcattcagagctctctac
ccagaaacggtccacacacgcttccctccgctctataaggagctgtttggctcagacttt
gagcaggttctgcctcaggaggcctga
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