Labeo rohita (rohu): 127171001
Help
Entry
127171001 CDS
T09007
Symbol
znf827
Name
(RefSeq) zinc finger protein 827 isoform X1
KO
K27104
zinc finger protein 827
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127171001 (znf827)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127171001 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-H2C2_5
zf-C2H2_16
zf-C2H2_4
zf-Di19
zf-C2H2_6
zf-C2H2_5
zf-C2H2_jaz
CENP-N
zf-C2H2_15
zf-met
Motif
Other DBs
NCBI-GeneID:
127171001
NCBI-ProteinID:
XP_050975737
LinkDB
All DBs
Position
1:26315889..26409608
Genome browser
AA seq
1425 aa
AA seq
DB search
MPRRKQEQPKRLPSHVDTVEDGGPEGGSVEEDSWFGNTSDSPSESSYGDVQDELRVSPDN
VPRPDHDTSAESSLGCPTPVQRASLELLGLDSGVLSTQDMLSSEVSSLYGDSNQALGKPL
SSNLRRLLEAGSLKLEGGDLTGRGTGRGPESPPVSLVLSPSSHHAQQLSALARRLANSSS
NNSGNSNSASPASVATVKQEPCDPYGPSNGPNSGSSGFVWVGVADKWPSTSCSAPSGSSL
SPDSAIQKLKAAANAVLQDKSAVASSTSASSSSSSSSSSSSVTSSSMAALGTRSDDAVRF
EPFASPFSPQSASSTLAALSKKVSERSQQQVGSSEHQPSAGSFLSLVSMTSSAALLKEVA
ARAAGNLLADKKEPALVLGASEDVKPLLDRNQKVPTPTQAMDLLLPAIPKGRAKPSSQAG
SPEDGGKPFQCPVCGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQ
HQDRGETFQCELCPFTSSRHFSLKLHMRCHQHFPRPDLKVKEEPGTDTEEGEGLLMGDGG
VAGDQVMNTDASMSPTVSQPDGRLLASPAEPSNHVQIKEEPQERDLSVMSPFALCRERPS
SSSSSLDLPGLKSSPPGPGPTAASLFSPDITTKTATDLLIKLSAANQKEALKGPFCVKEE
PQAEEPLSSQRGPSYSFCQEGPPGSTKPREEGSPMLGKSSLLSQDINVKVASELLMKLSE
NNKEACHQNVIVKAEPMEVDPPLELAPPSSHLLGFSTSGACEKKEPMVNLPDPLPRPQND
LFSQDISVKMASELLFKLSEKVSKANENKDNASFGIHSPFLDDRFRQSPFSTRSKSSSPA
EAGSSSRVAQQDPEKVSSEPGNGLAQWRLNEQLFPCPVCGKVFGRQQTLSRHLSLHTEER
KYKCHLCPYAAKCRANLNQHLTIHSVKLVNTDAEQIVTAVTNEGPELKNCPYYYSCHVCG
FQTELNAQFVSHMSLHVDKEQWMFSLCCSTCEYVGVDEAEMKAHISAGHAGLNSRSPLSE
TKSTSSSLSALSDSLNSSEGGDVAQGNEELKSLLAPPSSAGSQSSSGPGTEEKAEKGFEC
VFCNFVCKTRPMYERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPAGGLKCPLC
IYSTNRPAAMEGHLKTHYKMEYRCRICQAVWANQAELERHTRAHRLGNHYKCEQCGYLSK
TANKLIEHVRVHTGERPFHCDRCSYSCKRKDNLNLHKRLKHAPRQTFGCAQCPFTTTHPF
VYSRHVKKHQGGEGSAEEGEARPGTPRPGLLERGGSSSGSGDSGSTSPLMNLSASQALQS
VALSITSKQQDGTPTTRYLSANGTFSTLAARYLEQYRNCDLAHLIPLTTLFTARRFTFHS
PSPSNSSPPFSAFWSNSSSQSPPSPTSLKHSFLAYLGLTERAKTI
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaaacaggagcaacccaagcgcctgccttcacatgtggacacggtagag
gatggagggccagagggtggctcagtagaggaggacagctggtttgggaatacctccgac
agcccctctgaatcgtcctacggtgatgtgcaagatgagctgcgggtttccccggacaat
gttccccgaccggaccatgacacctcagccgagagctccctgggctgcccgacgccagtt
cagcgggcttccctggagctactggggctggacagtggggtcctctcgacccaggacatg
ctgtcctctgaggtgtcctctctttacggagattccaaccaggctttgggcaagcccctc
agcagcaacctgcggcgtctcttggaggctggctcgctaaagctggagggaggggacctg
actgggcgtggaacgggcagaggaccagagtcgcccccggtcagcttggtactgtctcca
tcttcacatcacgcacagcagctgagtgccctggcgaggaggttggctaacagcagcagc
aacaacagcggcaactcgaactctgcatcacctgcgtctgtagcaactgtcaagcaggag
ccttgtgacccatatggccccagcaatggccctaactcaggcagcagtggcttcgtatgg
gtaggcgttgccgataaatggccatcgactagttgctcggctcccagcggcagcagccta
tcgccagactcggctatccagaagttaaaggcggccgccaacgccgtgctccaagacaag
agcgcggtggcctcctccacctcggcgtcctcatcctcctcttcctcctcctcgtcctct
tcggtcacctcctcctcaatggcagccctgggcactcgctctgatgatgcggtgcgcttt
gaaccgttcgcttcacccttcagtccgcagtcagccagctccacgcttgctgccctctca
aagaaagtgtctgaaagaagtcagcagcaggtgggctcatctgagcatcaaccctcagct
ggctcctttctctctctggtttccatgacctcctcagcagctctgctaaaggaggtggcc
gcacgagcagcagggaaccttctagctgataagaaagagcccgcattagtactgggagcc
tccgaagatgtcaagcccctgttagacaggaaccagaaggtgcccaccccaacccaggcc
atggatcttctgctgccagcaatccccaagggaagggccaagcccagcagtcaagcaggt
tctcctgaggatggagggaagccctttcagtgcccggtgtgcggtctggtcatcaagaga
aagagctactggaagagacatatggtgatccacacaggcttaaaaagtcaccagtgtccc
ctctgtccctttcgctgtgctcgtaaagacaatctcaagtcccacatgaaggtccatcag
caccaagaccgaggagagactttccagtgcgagctgtgccccttcacatcctcccgccac
tttagcctcaagctgcacatgcgttgccatcagcacttcccccgtcccgacctcaaagtc
aaagaagaacccggcacagacacggaggagggcgaaggcttgctcatgggggacggtgga
gtcgctggcgatcaggtcatgaacacagatgcttccatgtctcccactgtgagccaaccc
gacgggcgtttgctggcctcccctgcagaaccctcgaaccacgtccagatcaaggaggaa
ccccaggagagggatctgtctgtgatgtctccctttgccctgtgtagggagcgacccagc
agcagcagcagttctctggatctgcctgggcttaaatccagtccaccggggcctggacct
acagctgcttcgctcttcagcccagatatcaccaccaagacggctacggaccttctcata
aagctctcagcagcgaaccagaaggaggccctaaagggtccattctgtgtcaaggaggag
ccccaggcggaagagcccctaagctctcagaggggaccaagctatagcttctgccaagaa
ggacccccagggtccaccaagccacgagaggaggggagcccgatgttgggcaagagcagc
ctgctcagccaggacatcaacgtcaaagtggcctctgaactgcttatgaagctctcagag
aataacaaagaagcttgccaccagaacgtcatagtgaaggcggagcctatggaagtggac
ccgcccctagaattggcccctccctcctcccatctactgggcttcagcacttcaggggca
tgtgagaagaaggaaccaatggtcaacctcccagatccattgccccgcccccaaaatgac
ctcttctcccaggacatatcagtcaaaatggcctccgagctgcttttcaaactgtctgaa
aaagtaagtaaagctaacgaaaacaaagacaatgcgtcattcggtatacacagccctttc
ctagacgaccgctttagacaatcacctttcagcacgcgctccaagagctcttccccagct
gaagccggatcttcaagcagggttgcccagcaagatccagagaaggtgagtagtgagcca
ggaaatggactcgcccaatggagactcaacgaacagctctttccctgccctgtttgtggc
aaagtgtttggtcgccaacagactctctccaggcatctctccctacacacagaagagagg
aagtataagtgtcatttgtgtccgtacgcggctaagtgccgagccaacctcaaccagcac
ctcaccatccactcagtcaaactggtgaacacagatgccgagcagattgttaccgctgtt
accaacgaaggcccagagctcaaaaactgcccctactactacagctgccacgtctgtggc
ttccagacagagttaaacgctcagtttgtcagtcatatgtctctccatgtagacaaagag
cagtggatgttctcgctttgctgtagcacctgtgagtatgtgggagtggacgaggccgag
atgaaggctcacatcagtgcagggcatgcaggtctcaattccagaagccctctcagtgag
accaagagcacttcctcctctctctcagccctcagcgactccctcaacagctctgaaggt
ggagatgttgcccaaggtaacgaagaactaaaaagccttttggccccgccttcttctgcg
ggcagtcaatcaagctcaggcccaggaacagaggaaaaagcagagaaaggctttgaatgc
gtcttctgcaactttgtgtgtaaaactcgacccatgtacgagcggcacctacagatccac
ctgatcacgcgcatgttcgagtgcgacgtctgccacaagttcatgaagacacccgagcag
ctcctggagcacaagaagtgccacaccgtccccgctggagggctcaagtgccctctctgc
atctactccaccaacaggccagccgccatggagggccacctgaagacgcactacaagatg
gagtatcgctgccgcatctgccaagccgtgtgggccaatcaggcagagctggaaaggcac
acgcgtgctcaccgcctgggcaaccactacaagtgcgagcagtgcggctacctctccaaa
acagccaacaagctcatcgagcacgtgcgcgtgcacacgggcgagcggcctttccactgc
gaccgctgcagctacagctgcaaacgcaaggacaatctcaacctccacaagcggctcaag
cacgcgccgagacagaccttcggctgcgcccagtgcccgttcaccaccactcacccgttc
gtctacagccgccacgttaaaaagcaccaaggcggggaggggagcgccgaggaaggtgag
gctcggccaggcacgccacgtccgggccttttggagcgaggtgggagcagcagcgggagc
ggggacagcgggagcaccagtccgctcatgaacctgtccgcctctcaagccttgcagtcc
gtcgccctgtcgatcaccagcaagcagcaagacggcaccccaaccacgcgctacctctcg
gccaacggcacgttctccacactggcggctcgctacttggaacagtacaggaactgtgac
ctggctcacctcatccccctcaccacgctctttacggcccgccgcttcacattccacagc
ccctcgccctcaaactcctctccgcccttctcggcgttctggtccaactcgtcctcgcag
tcgccgccctctcccacgtcactcaaacactccttcctggcatacctgggattgacagag
agagctaagaccatttga
DBGET
integrated database retrieval system
