Labeo rohita (rohu): 127173160
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Entry
127173160 CDS
T09007
Symbol
trmt1
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA (guanine(26)-N(2))-dimethyltransferase
KO
K00555
tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:
2.1.1.215
2.1.1.216
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127173160 (trmt1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.215 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase
127173160 (trmt1)
2.1.1.216 tRNA (guanine26-N2)-dimethyltransferase
127173160 (trmt1)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
127173160 (trmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM
Torus
zf-CCCH
zf-CCCH_4
zf-CCCH_DUS3L
E7
zf-CCCH_9
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
127173160
NCBI-ProteinID:
XP_050978801
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All DBs
Position
11:complement(21319989..21327444)
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AA seq
678 aa
AA seq
DB search
MLARTILQVSSRCTGLPLAFPKKRSSLLEILTTGHGFVFKKFRTMDSKKESEESQDATSA
GADGATTAVPMEDTNPSSSAESIQTSSTEPGLLPGETVVREGKAAILFPSANEVFYNPVQ
EFNRDLTCAVITEFAREQLAQRGIRILVPGEKDRVVVQLSEEKNGTEGQEASEQPENEQQ
KEEEGDEKEYITASAGERCEQGLRVLEGLAASGLRSVRFALEVPGLKSITANDYSAKAAA
LIARSAQHNNVSHILQASQRDASMVMYEARGRKERYDVIDLDPYGSPSPFLDAAVQAVSE
GGLLCITCTDMAVMAGNSGETCYSKYGSVSIKSKYCHEMALRIILHSLDQRAAVYQRYIE
PLLSVSVDFYIRVFVRVKTGQAVVKNSASKQALLYNCVGCGAFHLQRMGKKMSQGKHMKY
SAATGPPVGPNCEHCGQRHQLGGPIWAEPIHDNAFVQKVLGAVSGNPTRFRTSKRIEGVL
SMVTEELQDVPLYYVLDHLSSTVHCNTPPMLQFRSALLHAGYRVSLSHACKNAVKTDAPA
GVLWDIIRCWEKSNPVKRERLSETSPAHRILSTEPTLQACFEIREDANPQSRKRHLTRFQ
ENPQANWGPKARAKAGGGISSELEDKRKQFQGKRKKQITDSSQLKSFPCKKFRKGTCTHG
DKCCYSHELEQETEEKMD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaaggactatacttcaggtgtcctcaaggtgtactggtttgccattagcattt
cctaagaagagatcctcactacttgaaatcctcactacaggacacggttttgtcttcaaa
aagttcaggacaatggacagcaagaaagaatctgaagaatcccaggacgcaaccagtgca
ggtgcagacggtgctaccacagcagtaccaatggaagacacaaatccctcaagctctgca
gaaagcattcagacctcatctacagaacctgggcttttaccaggggagactgttgtcaga
gagggaaaggctgccattttattcccaagtgctaatgaggtgttctacaaccctgtgcag
gagttcaaccgagatttaacgtgtgcggtgatcacagagtttgctagggagcagcttgct
cagaggggcatccggatactggttccgggtgagaaagatagagttgtggttcaactctca
gaggagaagaatggaacggagggccaggaagcatcagagcagcctgaaaatgagcagcaa
aaggaagaagagggagatgagaaagagtacatcactgcatctgcaggggaaagatgtgag
caaggtctgcgtgtgctggagggtctggcggcatcaggtctgcgttctgtgcgttttgct
ttagaggttcctggcctgaaaagcatcactgctaatgattactctgctaaagctgctgcc
ctgattgcccgcagtgcacaacacaacaacgtgtcccacatactgcaagccagccaaaga
gatgccagtatggtgatgtatgaggcaagaggcaggaaggaacgctatgatgtcattgat
cttgacccctatggcagcccgtctccgtttctggacgcagctgtgcaggctgtcagtgag
ggtgggttgctttgcatcacgtgtacagacatggctgtaatggctggaaatagcggagag
acatgctacagcaagtatggctctgtgtccatcaaatccaaatactgtcatgagatggct
ctgcgtataattctgcacagtttagatcagagagcagccgtgtatcagcgctacattgaa
cctctcttgagcgtgagtgtggatttctacatccgtgtgttcgtcagagtcaaaacaggc
caggctgtggtcaaaaactctgccagtaagcaggcgctgctgtataactgtgtcggctgt
ggtgcgtttcatctgcagaggatgggaaagaagatgagccaaggcaaacatatgaagtat
tcggcagccactggaccacctgtagggcctaactgtgaacactgtgggcagaggcaccag
ttgggaggtcccatctgggcagagcctattcatgataatgcattcgttcagaaggttcta
ggtgccgtttcagggaatcccacccgctttagaacgtcgaagcggatcgaaggggtgctt
agcatggtgaccgaggagctgcaggatgttcctctgtattatgttttagatcatttgagc
agcacagttcactgcaacacgccgcccatgctgcagttcaggtcagctctcctgcatgct
gggtacagagtgtctctctctcacgcctgtaagaatgcagtgaagactgatgctcctgct
ggggtgttatgggatatcattcgctgctgggaaaagtccaaccctgtgaagagagagcgg
ttatcagaaaccagtcctgctcaccgcattctctccacagagccaactcttcaagcctgc
tttgaaatcagagaagacgcaaaccctcaatcacgaaaacgccatctcacacgcttccag
gaaaacccacaggccaactggggacccaaagcacgtgccaaagctggtggaggaatctcc
tctgagctggaggacaaaagaaaacagtttcagggtaaaagaaagaaacagatcacagac
tcttctcaactcaagagcttcccctgtaagaagtttcgaaagggaacatgtacacatgga
gacaaatgctgttattcgcatgaactcgagcaagaaacagaggaaaagatggattag
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