Labeo rohita (rohu): 127173163
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Entry
127173163 CDS
T09007
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127173163 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127173163 (slc6a11b)
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127173163 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127173163
NCBI-ProteinID:
XP_050978815
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Position
11:11142091..11169589
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AA seq
617 aa
AA seq
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MTAEKTIPIINGKADDTMDPEAANPSAVRSNDKKVVNERGQWNNKVEFVLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEG
IGYATQVIEAHLNVYYVVILAWAIFYLFNCFTTELPWASCGHYWNTENCVDFNNESIANL
TNPYATSPVMEFWERRVLSISSGIEEVGSLRWELAICLLIAWVICYFCIWKGPKSTGKVV
YVTATFPYFMLLILLLRGITLPGAANGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICL
GCLTALGSYNSYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESG
PGLAFIAYPKAVTMMPWSPLWACLFFMMLIFLGLDSQFVCVESLVTAIVDMYPKTFRVGY
RRELLILGMSVASFLVGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWIYGSD
RFYLNIEDMIGYKPIFFIKWCWKFFTPGICAGIFLFFLIKYKPLKYNNVYTYPDWGYGIG
WMMAMSSMVCIPLGILFQIWKTEGTFRERIKKLTTPSSDLRMRGRLSSRGPCAINDADAK
MRADGKISTITEKETHF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaaaagacgattcccataataaatggaaaagcagacgatacgatggacccc
gaagcggcgaacccgagcgcagtgcgcagcaatgataagaaggtggtgaacgagagagga
cagtggaataataaggttgagtttgtgctgtcagtggctggagagattatcggccttggc
aacgtttggaggttcccatatctgtgttacaagaacggaggaggtgctttctttgtgcct
tatgtcatctttttcgtctgctgtgggatcccagtcttcttcctggaaacagcgctaggt
cagttcactagtgaaggaggcatcacatgttggcgaaaagtctgcccgctctttgaaggc
attggttatgcgacccaagtcatcgaagcccacctgaatgtttattatgtggttatattg
gcctgggccattttctacctgttcaactgttttacaacagagctgccctgggcatcgtgt
ggtcactactggaacacggaaaactgtgtggattttaacaatgaaagcattgccaacctc
accaacccatatgccacatcaccagtcatggagttttgggaacgccgtgttctcagcata
tcctctggaattgaagaagttggcagccttcgctgggaacttgctatctgtctacttata
gcctgggtcatatgttatttctgcatttggaaaggtccgaaatcaactggaaaggtggtg
tatgtcactgcaacctttccttatttcatgctgttgatcctccttcttcgaggaatcaca
ctgccaggagctgctaatggaattaaattctacctgtatcctgacatctctcgtctgtca
gaccctcaggtgtgggtggatgcaggaactcagatcttcttctcatatgctatatgtctt
ggctgtcttacggctctcggcagctacaacagctacaacaacaactgctacagggactgc
atcatgctgtgctgtttgaacagtggcacgagttttgtggcgggatttgccatcttctct
gtcttgggcttcatggcatatgaacagaatgtgccgatagaggcagtggcagagtcaggt
cctggtctagcattcatagcatatcctaaggctgtaaccatgatgccgtggtctccactg
tgggcctgcctcttcttcatgatgcttatcttccttggacttgacagtcagtttgtgtgt
gtggagagtcttgtgactgcaatcgtggacatgtatcctaaaaccttccgcgtgggctat
cggcgagagcttctcatcctgggaatgtctgtggcctcgttcctcgtgggtctaataatg
ttgacagagggtggcatgtatgtgttccagctatttgattcgtatgcagccagtggcatg
tgtctgttgtttgtggccatctttgagtccatctgcattggctggatttatggtagcgac
aggttttatttgaacattgaggacatgattggatacaagcccatcttcttcatcaaatgg
tgctggaagttcttcaccccaggcatctgcgctggcatcttcctgttcttcttaatcaag
tacaagccgctgaagtataataatgtctacacatatccagattggggttatggcattggc
tggatgatggctatgtcctctatggtttgcatccctctgggaatcttatttcagatctgg
aagacggaaggaactttccgtgagaggatcaaaaagctgaccacacccagctctgacctg
agaatgaggggacgcctcagctccaggggtccctgtgctatcaatgatgctgatgccaaa
atgagggcggatggcaagatctccaccatcacagagaaggagacgcatttctaa
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