Labeo rohita (rohu): 127178394
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Entry
127178394 CDS
T09007
Symbol
phf1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127178394 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127178394 (phf1)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127178394 (phf1)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
127178394 (phf1)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127178394 (phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
DUF4537
Chromo
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
127178394
NCBI-ProteinID:
XP_050987208
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All DBs
Position
16:complement(6098246..6120272)
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AA seq
505 aa
AA seq
DB search
MGGVSEGEDVLARWSDGLLYLGNVKRVDSVKQCCLIRFEDNSEFWVLRKDIHSFSSGGEE
VCCICDAPPLKEPLVNCLKCRHGYHPECHTPPIEPEVDPNSWICRQCVFAVATKRGGALK
RGRFARLMQIMKVRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYQFQCSVCTNGPETIQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEIMSFANENWESLLLGTLSDTPRQDRCQNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLSSDQSPFIAEQPINITHRRSPTSLPCQRRAVGPEARKSKRRVTETQTCPAGVA
TNAIDLVPCCHGYVDGTSLYNPRKPEEEMSLGSPPKRMYALYHPSYNGSQDLSRTLHHYS
AEDPCRLPAPCLPFSLSSAHPTGQRYESCPSLFLHDMPPYPNTVGMGGPTPMGWGGNDAV
RILARRVTADGKVQYLVEWGNVSVY
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggggggagttagcgaaggagaggatgttttagccaggtggagcgatggacttctctac
cttggcaatgtcaaacgagtggacagcgtcaagcagtgctgtctaatcagatttgaggat
aactctgaattctgggtcctcaggaaagacatccactcattctcttcaggtggagaggag
gtgtgctgtatctgtgatgctccgcctcttaaagaacctctcgtaaactgcctcaaatgc
cgccacggttatcatccagagtgccacacaccgcccatcgaacctgaagttgaccccaac
agctggatatgtcgccaatgtgtcttcgcagtcgcaacaaagagagggggagcgttaaaa
agaggacgtttcgcacggctcatgcagatcatgaaagtgcggctgccctatcagctgtca
tctttagactgggacccgcagcacttgaccaaccagcagcagtgttactgctattgcgct
ggacctggagagtggaatctgaagatgttgcagtgtgggagttgtgggcagtggtttcat
gaagcttgcactcagtgcctgaccaaacctcttctctatggagaccgcttttatcagttc
cagtgctcagtgtgcacaaatggtccagagaccatccagaggcttccaatgacctgggta
gatttggcccatttggtgctgtatcacctctccctgtgctgcaagaggaagtattttgat
ttcgatcatgaaatcatgtcttttgcaaatgaaaattgggaatctttgcttcttggcacg
ctgtcagacacaccgaggcaagaccgttgccaaaacctgctcaatgctttaaattcccac
aaagacaggtttgtttcggggaaggaaatcaagaagaagaagtgtctcttcggtcttcaa
gttcgggctcctccccctctgtcgtcggaccaatcgcctttcatcgccgaacagccaatc
aacatcactcacaggagaagccccacgtcgctgccctgccagcggagagcggtgggtccg
gaggcccgtaaatcaaagcgtcgggtcactgagactcagacttgtccagcaggagttgcg
acaaacgctattgacctggtgccgtgttgccacggttatgttgatggaacaagcttgtat
aaccctagaaaaccagaggaagagatgagtttgggttcacctcccaagagaatgtatgct
ctctatcacccttcatacaacggatctcaggacctgtctagaactctgcatcactacagt
gcagaggacccttgtcgacttccagccccctgccttccattctccctgtcctcggctcac
ccaaccggacagcggtatgagagctgcccttctctcttcctgcatgacatgccaccctac
cccaatacagtcggcatggggggacccacgccgatgggatgggggggaaacgacgccgtc
aggatcctggcaagacgcgtaacggcggacggaaaagtccagtacctagtggaatgggga
aatgtgagcgtgtactga
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