KEGG   Labeo rohita (rohu): 127179858
Entry
127179858         CDS       T09007                                 
Name
(RefSeq) calpain-1 catalytic subunit-like
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04141  Protein processing in endoplasmic reticulum
lroh04210  Apoptosis
lroh04217  Necroptosis
lroh04218  Cellular senescence
lroh04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127179858
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    127179858
   04217 Necroptosis
    127179858
   04218 Cellular senescence
    127179858
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    127179858
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lroh01002]
    127179858
Enzymes [BR:lroh01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     127179858
Peptidases and inhibitors [BR:lroh01002]
 Cysteine peptidases
  Family C2: calpain family
   127179858
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III CAPN13-like_C_EFh EF-hand_7 EF-hand_6 EF-hand_1 EF-hand_5
Other DBs
NCBI-GeneID: 127179858
NCBI-ProteinID: XP_050989586
LinkDB
Position
17:complement(26788322..26801685)
AA seq 702 aa
MPPPAVPYGMCLKVVNDRNSKGGMGSETNPLRFMDQDYNFLQDYCLKTRQRFVDEFFPPD
PRSIGEGLLDPDVMARVEWKRPMVLYPNAAEFVVETVSRFDYAQGNVGNCWFLASVGALT
FQTKLLQKVVPDGQSFSHNYTGLFHFRFWRFGKWYDVVIDDKLPTYNGKLIFVRSKTYNE
FWPALLEKAYAKVCGSYADMHSGRVSEALLDFTGGVHMHYELKTAPADLWEIMYRAYQSE
VLMGCETPPGNENRLPNGIVLGHAYTITKVYQVMSGSNPVHLVRLFNPWGDSEWNGDWSD
KSPLWNTVNDEDYKQLLVRENGEFWMSMKDFVRTFDNMDICCICPDFLEEQSACHWTSKY
HHGSWVTGSTAGGCMNHPDTFCKNPQFWLRISELDKACEQGQKNVLVSLIQTPDKRHRRR
AAHHGIGFYVFAIPPEMRSEGKFGSSFFSTRKPVVTSGDFQDARQVMKFFRLEPGEYLIV
PSTFHPNKSGEFILCILCKNEIHIQKDTERMEKDFLVDLLGGSEVKYTENVDERSKTRAQ
YFRQYSDQYKVVDAEKLQQLLHENLLRGNKNTEGFGLDSCRSIIAMSDFNVTGRLRGPEF
LRLWNSIMMYRDIFYSMDSSKDGVLSLNELQNALEKTGLHLNEDILNLMFVRYAGASEHI
SLEGFICLVMRLNCMARIFQRLCENGKITLDESEWIGLTMYS
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgcctcctccagcagttccatatggcatgtgcttaaaagtcgtaaacgaccgcaactcg
aagggtggaatgggctctgaaacaaatcctttgaggttcatggatcaggactacaacttt
ttacaagactactgtctcaagacaagacagagatttgttgatgagtttttcccaccagat
ccccgttccattggtgaagggctgctggatccagatgtcatggccagggtggagtggaaa
agaccaatggtgttgtatccaaatgcagctgaatttgttgtagagacagtgtccaggttt
gactatgcccaagggaatgtaggaaactgttggtttctggcctctgttggggctctgaca
tttcaaaccaaattattacagaaggttgttccagatggacagtcattcagccacaactat
actggtttatttcacttcaggttctggcggtttgggaaatggtatgacgttgtgattgat
gacaaactgccaacctacaatggcaagctgatttttgtgagatcaaaaacatataatgag
ttctggcctgctttgctagagaaagcatatgccaaggtgtgcggctcctatgctgacatg
cattctggtcgagtatctgaggccctcttggactttaccggtggggttcatatgcactat
gaactgaaaacagctcctgctgatttgtgggagataatgtaccgtgcttaccagtcagag
gtccttatgggctgtgaaactccaccagggaatgagaatcggttaccaaatggcatagtc
ctgggccatgcttacaccataaccaaggtttaccaggtcatgagtggtagcaacccagtt
cacctggttagattgttcaacccatggggagacagtgagtggaatggagactggagtgac
aaatcacctttgtggaacacagtgaacgatgaggactacaaacaactccttgtgcgtgaa
aacggagagttctggatgtcaatgaaagattttgttagaacatttgacaacatggatatc
tgctgtatctgtcctgattttctggaagagcagtctgcttgtcactggacttccaaatac
caccatggcagctgggttactgggagcacagctggaggctgcatgaatcatccagacacc
ttctgtaaaaacccccagttttggttgaggattagtgagcttgataaagcctgtgaacag
ggtcagaagaatgttctggtgtccctcatacagacacccgacaagagacacagacgccgc
gctgcacaccatggcatcggcttctatgtgtttgcaattccacctgagatgagatctgag
ggaaagtttggatcaagctttttctctacaagaaagcctgtggtaacaagcggggacttt
caggatgcaagacaggtgatgaaattcttcaggctggagccgggagagtatctcatcgta
ccgtccacattccatcccaataagagtggagaattcattctgtgcattctctgcaaaaat
gagatccacattcaaaaggacacagaaagaatggagaaagattttcttgtggatctttta
ggcgggtctgaggtcaaatacactgaaaatgtggatgaaagatcaaaaactagagcacaa
tattttcgacaatattctgatcagtacaaagttgttgatgctgagaagcttcaacagctt
cttcatgaaaacctacttagaggtaataaaaacactgaaggatttggcctggattcctgt
agaagtataattgccatgtcagatttcaatgttactggaagacttcgcggaccagaattt
cttcgtctatggaacagtatcatgatgtacagggatatcttctacagcatggattcttct
aaagatggcgttttgtctttgaacgaactgcaaaatgcattagagaaaacaggcctgcat
ctaaatgaagacatcctgaatctcatgtttgtgcggtatgctggtgcttctgaacacatt
tctctggagggtttcatctgccttgtcatgcgtttgaactgcatggccagaatattccag
agactgtgtgaaaatggaaagataactcttgatgagagtgagtggattggactcaccatg
tactcatga

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