KEGG   Labeo rohita (rohu): 127180038
Entry
127180038         CDS       T09007                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127180038 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lroh03041]
    127180038 (cdc5l)
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127180038 (cdc5l)
Spliceosome [BR:lroh03041]
 Complex B
  Other components
   Prp19 complex
    127180038 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    127180038 (cdc5l)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    127180038 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C DUF4072
Other DBs
NCBI-GeneID: 127180038
NCBI-ProteinID: XP_050989890
LinkDB
Position
17:3551446..3571631
AA seq 802 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRENEDDVGDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEIPFEKKPAQGFYDTSMEQYDPLEPDFK
RLRQQHLDGELRSEKEDRDRKKDRQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEIARQTAEESGITNSASSALLSEYNVTNNSMALRTPKTPAAQD
KILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGA
EGMTPHGGMTPKPSVGVTPGRTPLRDKLNINTEEGGVDYNDPSFAKHLQRESREQLRLGL
MSLPVPKNDFEIVLPENAEKELEEAEVDESFVEDAAEIELRKQAARDAEREKELRQRHTA
VQRELPRPSEVNETILRPHNVEPPLTDLQQAEELIKKEMITMIHFDCLHHPFGDAQAKKG
KGVGSSSNNAEHITYLEKTPYEKVSEDELKKAGELLTQEMEVVKHGMGHGDLSMEAYNQV
WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKKLEINRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLLKQLSELWDQVEQAHMELHTFQELKKQEDHAIPRRQEALREDVQRQQDR
EKELQQRFADLLLEKQTLSQKF
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgattaaaggaggcgtgtggcgcaacactgaggatgagattctcaaa
gcggctgtaatgaaatatggcaaaaatcagtggtctcgaatcgcatccctgctgcaccgc
aaatcagccaaacagtgtaaagccagatggtatgagtggctggaccccagcattaagaaa
acagaatggtcacgtgaggaagaggagaaacttcttcacttggccaaactgatgcccact
cagtggaggacaatcgcccccatcatcgggcgaacagctgctcagtgtctggagcattat
gaatatctgctagataaagccgcccagagagagaatgaggatgatgtgggcgatgaccct
cgcaagctcaaaccaggagagatcgacccaaaccctgagaccaaaccagccaggcctgac
cctgtggacatggatgaagatgagctggagatgctgtctgaagccagagcccgattggcc
aacacacaaggcaagaaggcaaagcggaaagccagagagaaacagctggaggaagcgcgc
cgtctggcagcacttcagaagcgcagggagctgcgagctgcaggcatcgacatccagaag
aagcgcaagaagaagagaggtgtcgactataatgctgagatcccgtttgaaaagaaaccc
gcgcagggcttctatgatacatccatggagcagtacgatcctttggaaccggacttcaaa
cgcctacgccagcagcatctcgatggagaactcaggagtgagaaagaggatcgcgaccga
aagaaggacagacagaagatcaagaagaagaaggagtccgatctgccctcagccatcctg
cagaccagcggagtgtcagagttcacaaagaagagaagtaaactggtgctgccggcacca
cagatctctgatgccgagctggaggaggttgtcaaattgggtcaggccagcgaaatcgcc
cgtcagaccgccgaggagtctggaatcacaaactctgcctccagtgctcttctgtccgaa
tacaacgtgaccaataactccatggccctgcgcacacccaaaactccagcggcacaggac
aaaatcctgcaggaagcccagaacctgatggcacttaccaacgtggacactcctcttaag
ggagggctgaacacacccctacatgagagcgacttctctggtgtcacaccacagagacag
gtggtccagacgcccaacacagtgctgtctacacccttcagaactcccagtcacggagcc
gagggcatgacccctcacggtgggatgactcctaaaccctcggtgggcgtgaccccgggc
aggaccccgctgcgggacaagctcaacattaacacagaggagggcggtgtggactacaac
gacccgtcatttgccaaacacttgcaaagggagtcccgcgagcagctccgattgggcttg
atgtctcttccggtgcccaaaaatgactttgagatcgttcttcccgaaaacgctgagaaa
gagctggaggaagccgaagtggatgagagtttcgtggaggatgcggccgagatagagctg
cgtaaacaggccgccagagatgctgagagggagaaggagctgcgtcagaggcacacggca
gttcagagagaattaccaagaccttcagaggtgaatgaaacgatactccggcctcataac
gtggagccgccgctgacggacctgcagcaggccgaagagctcattaagaaagaaatgatc
accatgatccacttcgactgtctgcatcaccccttcggcgacgcccaggccaagaaaggt
aaaggagtgggatccagctccaacaacgcagagcacatcacttacctggagaaaacacct
tacgaaaaggtctctgaggacgagctcaaaaaggctggagagctgctgacccaggaaatg
gaggtggtgaaacatgggatgggtcatggagatctgtctatggaggcgtataaccaggtg
tgggaggagtgttacagtcaggtcctgtacctgcccggacagagccgctacacccgagcc
aatctggccagcaagaaagacagaatcgagtctctggagaagaaactggagatcaacaga
ggtcacatgaccacagaggccaagcgtgcggcgaagatggagaagaagatgaagattctg
ctgggcggctatcagtcgcgggccatgggtctgcttaaacagctcagtgaactctgggat
caggtggaacaggcccacatggagctccacaccttccaggagctgaagaaacaggaagac
cacgccattccacgcagacaggaggccctgagagaggacgtccagagacagcaggacaga
gagaaagagctgcagcagagattcgcagacctgctgctggagaaacagacgctctcacag
aagttctga

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