Furfurilactobacillus rossiae: LROSL1_1335
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Entry
LROSL1_1335 CDS
T06823
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lros
Furfurilactobacillus rossiae
Pathway
lros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LROSL1_1335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lros03019
]
LROSL1_1335
03400 DNA repair and recombination proteins [BR:
lros03400
]
LROSL1_1335
Enzymes [BR:
lros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LROSL1_1335
Messenger RNA biogenesis [BR:
lros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LROSL1_1335
DNA repair and recombination proteins [BR:
lros03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LROSL1_1335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SPOR
CbiK
Motif
Other DBs
NCBI-ProteinID:
QLE64152
LinkDB
All DBs
Position
complement(1468368..1469966)
Genome browser
AA seq
532 aa
AA seq
DB search
MSREPQKIDNDIKLPRHVRPDDPRLKLSETAVDLARDRQAVLHTHFGLKKFRPGQAEAID
SLQQGRNVLAILPTGSGKTLIYELTTYLINRPCLIVSPLLSLMQDQVGRLNQRGERRAVA
LNSLLTKPEKDSILSRLQQYRFIFISPEMLQNEGVMTAVRHCNIGLLVIDEAHCISTWGP
DFRPAYLSLGDVRSQLDNPLTCALTATADAHVQADILTQLHLRSSAERNSSMNTVTDDQQ
NVQVIRQSVNRPNIFLVMRSVTSRKEKATELMGLMAEIVKPGIIYFSSKAQADEWAQRLN
DAGYPAASYHAGLDAQTRYTVQQQFMADQLQIVCATSAFGMGIDKDNIRFVIHYHLPSNL
NDYVQEIGRAGRDGQQSIAICLIAPGDEQLPADLATLPLPNDHQVRTFYETKRPTLQTDM
DQLLDYYKKHHFSEQQLIDRFSALRQERQLALRKFINFTRSPDCLRKKLLTDFNESSVPH
DHNCCAPIGTEFSLSKLGLAQDQHELKTTMKIPGWRQQFEALFSENFTNSNV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtgaaccgcagaaaattgacaatgatatcaaattaccacgtcatgttagacca
gatgatccacgtttaaaattatcagagactgccgttgatttagcgcgtgatcgacaagct
gtattgcatactcattttggccttaagaagtttcgacctggacaggcagaagccattgac
agtttgcaacaaggacgaaatgtcctagccattctaccgaccggaagtggcaaaacatta
atttatgaactgacaacttatttgataaaccgtccgtgtttaattgtgtcgccactgtta
tcgttgatgcaagatcaagtgggacgactgaatcagcgcggtgaacggcgggcagtggca
ctaaactccttgcttaccaagccggaaaaagacagcatcttaagtagactacaacaatac
cgatttatttttatctcaccagagatgcttcaaaatgagggtgtaatgacggcagttcgg
cattgcaatattggtctgctcgttattgatgaggctcattgcatctcgacttgggggcca
gactttcgacctgcctatttgagcttgggcgatgttcgtagtcaattggacaatccgtta
acatgtgcgttgacagccactgctgatgcgcatgttcaagccgatattttgacacagcta
catttaagatcaagcgctgaaagaaattcgtcgatgaataccgttaccgatgatcaacag
aacgttcaagtcatcagacagtcggtaaatcgtcccaacatttttctagtgatgcgttca
gttacttcgcgaaaggagaaggctaccgaacttatgggcctgatggcagagattgttaag
cctggaattatttatttttcaagtaaggcacaagcggatgaatgggcgcaacggttaaac
gatgctggttatcccgcagccagctaccatgccggcttagatgcgcaaacgcgatatacg
gtacaacaacaatttatggcagaccaattgcaaattgtttgtgcaacgagtgcgtttgga
atgggcattgataaagataacattcgttttgtcattcactatcatttaccaagcaactta
aatgattacgtacaagaaattggacgagccggtcgtgatgggcaacaaagtattgcaatc
tgtctcattgcgcctggtgacgaacaattaccggctgatttggcaacgcttccgctgcca
aatgatcatcaagtcagaaccttttatgagaccaaacggccaacgctacaaacggatatg
gatcaattacttgactattacaaaaagcatcattttagcgaacaacaactgatagatcgg
ttcagcgcgcttcgtcaagagcggcaacttgcattgcgcaaattcattaactttacgcga
tctcctgattgtttgcgaaaaaaattattgactgactttaatgaatcttcagtcccacat
gaccacaattgctgtgcgcctattggaacggaattttcattgtcaaaattgggattggca
caggatcagcatgaattgaaaacgacaatgaaaattcctggctggcgtcagcaatttgag
gcactttttagcgaaaactttactaattccaatgtttga
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