Limosilactobacillus reuteri I5007: LRI_0827
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Entry
LRI_0827 CDS
T02701
Name
(GenBank) exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lrt
Limosilactobacillus reuteri I5007
Pathway
lrt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRI_0827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrt03400
]
LRI_0827
Enzymes [BR:
lrt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LRI_0827
DNA repair and recombination proteins [BR:
lrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LRI_0827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF3261
Motif
Other DBs
NCBI-ProteinID:
AGN99036
UniProt:
R9WG79
LinkDB
All DBs
Position
832550..833377
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AA seq
275 aa
AA seq
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MKFISWNIDSINAALTGTSVRAGETREVLRKIAAMKPDVIAIQETKLSKNGPTKKHLTVL
QELFPNYEVAWRSSVEPARKGYAGTMYLYLAQYEPKVTYPKINAPEPMDDEGRIITLEFP
DFYVTEVYTPNSGNGLKRLDERQTWDDCYRDYLRELDQQKPVIASGDFNVAHEEIDLAHP
ATNHHSAGFTDEERTHFSKLLAAGFTDSFRHLHPDEKGVYSWWAQRVITSKQNNSGWRID
YWLVSDRLADKITEAGMIDSGERRDHTPIILEIDL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttatttcgtggaacattgattcaattaatgcggcactaactggaacctccgta
cgggctggagaaacgcgggaagtattacgaaagattgcagcgatgaagccagatgtcatc
gcaattcaagagaccaagctgtcaaagaatgggccaactaagaagcatttgacggtttta
caagaattattccccaattatgaagtggcatggcgaagttccgttgaaccagcacgaaaa
gggtatgctggaaccatgtacctttatttagcccaatatgagccaaaagtaacttatcct
aaaattaatgcgccagaaccaatggatgatgaaggaagaatcattacccttgaatttcca
gacttctatgttacagaagtatatacaccaaattccggtaatgggcttaagcggttagat
gagcgccaaacatgggatgattgttaccgagactacctgcgtgaacttgaccaacaaaaa
ccggtaatcgctagtggtgactttaatgtagctcatgaggagattgatttagcccatcca
gcgaccaaccatcattcagctggctttactgatgaagaacgtacgcatttctcgaaacta
ttagctgctggctttaccgatagttttcggcaccttcatcccgacgaaaagggagtttat
tcttggtgggcacaacgggtaattactagtaaacaaaataactctggctggcggattgat
tactggttagtcagtgaccggcttgctgataagattacagaagcggggatgatcgatagt
ggagaacgtcgcgatcatacgccaattattctagaaattgacctttaa
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