Limosilactobacillus reuteri SD2112: HMPREF0538_20160
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Entry
HMPREF0538_20160 CDS
T01551
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru02024
Quorum sensing
lru03060
Protein export
lru03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HMPREF0538_20160 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HMPREF0538_20160 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0538_20160 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lru02044
]
HMPREF0538_20160 (ffh)
Enzymes [BR:
lru01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HMPREF0538_20160 (ffh)
Secretion system [BR:
lru02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HMPREF0538_20160 (ffh)
Eukaryotic Sec-SRP protein
HMPREF0538_20160 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
AAA_33
AAA_17
nSTAND3
6PF2K
AAA_18
MMR_HSR1
NACHT
CbiA
AAA_16
APS_kinase
TsaE
LTXXQ
Dynamin_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEI56373
UniProt:
F8DKR8
LinkDB
All DBs
Position
complement(154485..155930)
Genome browser
AA seq
481 aa
AA seq
DB search
MAFEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA
AGAEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGK
LALRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVA
KKNHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDK
LDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGD
MMTLIEKAQKNFDEEQAQETMDKMRENTFDYNDFLAQMDQVTKMGPLENIIKMMPGMANN
PALKNLNLDPKQFAHIRAIVLSMTPEERENPDLMNPSRRRRLAAGAGRPIVEVNRMIKQF
NQMRKMMKQVTNGNFNGMQNMFGGQMPGGKMGQMAMNRMARKMKKDKQKRIKKLRKLRKK
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgaaggtttaacagatcgtctgcaaaaggcgatggaaaaattacgacgcaag
cccaaagttacggaagctgatcttcgggaaacgatgcgtgagattcggctcgccctttta
gaggccgatgttaactttaaagttgtaaaagactttgtaaagaccgttcgggaaaaagca
gccggagcggaagtactgaaagggttaaatccagcccaacaaatcgttaaaattgttaat
gatgaattgacaaaactgatgggggaagaagcagttcctcttaacaaagcaccgcacatt
ccaactgttatcatgatggttggtcttcaaggggcaggtaagacgaccactgccggtaaa
ttggcattacgattaaagaatgaaaatcatgcgcggccaatgtttattgctgccgacgtt
taccgtcccgccgctattactcagttacaacaagttgctgaccagatcgatgttcctgtt
tttgaaaaggggacagatgttgacccggtggaaattgttcgcgaagggatggaagtagcc
aagaaaaatcataatgattatgtcattattgatactgctggtcggcttcagattgatgaa
caattaatggatgagcttgcaaacattaaagaactagtaaatccaaatgaaattttgctt
gttattgattcgatgactggtcaaaacgcagtaaatacagctcaaggcttcgatgataag
cttgacattactggggttgttttaaccaagttagatggtgatacccgtggtggggccgcc
atgtcaatccgggcagtcacaggtaagccgattaagtttgtcggtgaaggggaaaagatg
gaggatcttgatgtctttcaccctgaccggatggcttcacggattctgggtatgggggac
atgatgaccctaattgaaaaagcccagaagaattttgatgaagagcaagctcaagaaaca
atggataaaatgcgtgaaaacacatttgactacaatgatttcttggcacaaatggatcag
gttaccaagatgggaccattggaaaacattattaagatgatgccagggatggctaataat
cctgccttgaagaatcttaatttggatcctaagcaatttgctcatatccgggccattgtt
ctttcaatgacgccagaagaacgtgaaaaccctgatctaatgaatcctagtcgtcgtcgt
cgtttagcagctggtgcgggacggccaattgttgaagttaaccggatgattaagcaattt
aatcaaatgcgtaagatgatgaagcaggttacaaacggtaatttcaatggaatgcaaaat
atgtttggtggacaaatgccaggtggcaagatgggacaaatggcaatgaaccgcatggcg
cgaaaaatgaaaaaagacaagcaaaaacgcattaaaaagcttcgtaaattacgaaagaaa
aaataa
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