Limosilactobacillus reuteri SD2112: HMPREF0538_21153
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Entry
HMPREF0538_21153 CDS
T01551
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru03030
DNA replication
lru03430
Mismatch repair
lru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0538_21153 (dnaN)
03430 Mismatch repair
HMPREF0538_21153 (dnaN)
03440 Homologous recombination
HMPREF0538_21153 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lru03032
]
HMPREF0538_21153 (dnaN)
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_21153 (dnaN)
Enzymes [BR:
lru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0538_21153 (dnaN)
DNA replication proteins [BR:
lru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0538_21153 (dnaN)
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0538_21153 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
SLS
Motif
Other DBs
NCBI-ProteinID:
AEI57363
UniProt:
F8DR40
LinkDB
All DBs
Position
1128392..1129534
Genome browser
AA seq
380 aa
AA seq
DB search
MNFTINRSAFISQLNNILRAISSKTTIPILTGLKMVVNKDNIVLTGSNSDITIESVINAN
DAENDLTIEATGAIVLPARFFSDIVKKLPDKKVTIEVTSGFQADITSGSAKFQINGQDAE
NFPHLPEIETNKSVTLPNDILKEVIRQTVIAVSKQESRPILAGVHMTLKDGVLTAVATDS
HRLAQRKVVLENIDNSIDFDVIIPGKSMEELSGMISDVHEDVQMQVTENQVLFIFGNTHF
YSRLLEGNYPETSQLIPQTADTTVELEAGTFLSSIERASLLSHESRNDVVKLSLKPSESL
VRISGDSPDIGTVEEKVVTSALDGNDLEISFNPNYMKDALRSFGQATIKISFTSPLRPFT
LVPTEDQENFVHLITPVRTF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaattttacaattaaccgatctgcattcattagtcaactaaataatatcttacgtgcc
atttcatctaaaaccacaattccaattcttactggattaaagatggtcgtaaacaaagac
aacattgtgttaactggtagcaattctgacatcactattgaaagtgttattaatgctaat
gatgctgagaacgatttaacaattgaagccactggcgctattgtattaccagcccgcttc
ttcagtgatattgttaaaaagctgccagacaaaaaagtaactattgaagttacaagtggt
tttcaagcagatattacttctggttcagctaagtttcaaattaatggccaagatgctgaa
aactttcctcatttaccagaaattgaaactaacaaatcagtaacccttcctaacgacatc
cttaaagaagtaattcgtcaaactgttattgcggtatctaagcaagaaagtcgcccaatc
cttgccggggtgcatatgacgttaaaagatggcgtcctaacagctgttgcaacagatagt
catcgacttgcacaacggaaagtggtcctcgaaaacatcgataacagcatagattttgat
gtgattattcctggaaagagcatggaagaactttctggaatgattagcgatgtccatgaa
gatgtacaaatgcaagtaaccgaaaatcaagtattgtttatttttggtaatactcatttc
tattcgcgattactagaagggaactatccggaaacaagccagttaattccacaaactgct
gatacaacagttgaactagaagctgggacatttctatcatcaattgagcgtgcttcgctt
ttatctcatgaaagccgtaatgatgtggttaagttaagtctaaagccatcagaaagtctt
gtccgaattagtggtgattctccagatatcggtaccgttgaagaaaaggtagtcacgtct
gctcttgatggtaatgatcttgaaatctcgttcaatcctaactacatgaaagatgctttg
cgttcttttggtcaggcaacgatcaagatttcatttacttcaccattgcgaccatttacc
ttggtgccaacagaagatcaagaaaactttgtccacttaattacaccagtacggacattc
taa
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