Lynx rufus (bobcat): 124510242
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Entry
124510242 CDS
T08475
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04360
Axon guidance
lruf04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
124510242
09158 Development and regeneration
04360 Axon guidance
124510242
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124510242
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124510242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124510242
NCBI-ProteinID:
XP_046933037
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDSSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKELSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGVRTQHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQSAQATKESSNSA
DSDEKSDNEGSSKDKKKNFSLFDLTTLIHPRSAAIASERHNISNGSALVVQEPPREKQRK
VNFVTDIKNFGLFHRRSKQNAAEQNANQIFSVSEEVARQQAERPLERNIQLESRGLASRG
DLNIPGLSEQCILVDHRERNTDTLGLQVGKRVCSFKSEKVVVEDTVPIIPKEKHAKEEDS
SIDYDGNLTDTATHEDYVTTRL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaatgtgaatgccccctacagagatcgcatccctcta
aggatagtccgagcggaatccgaactctcaccatcagaaaaagcctacttaaacgctgtg
gaaaagggagattatgcaagtgtcaagaaatccctggaggaagctgaaatttattttaaa
atcaatattaattgcattgatcctcttggaagaactgctctcctcattgcaattgaaaat
gagaacttggagctcatcgaactacttttaagctttaatgtctatgttggagatgctcta
ttacacgctattaggaaagaagttgttggagctgttgagctgttactgaatcacaaaaag
cccagtggagaaaaacaggtgcctcccatactccttgataagcagttctctgaattcact
ccagacattacaccaatcattttggcagcccatacaaataattatgagataataaagctt
ttagttcagaaaggagtttcggtgcccagacctcacgaggtccgctgtaactgtgtcgaa
tgcgtctccagttcagatgtggatagcctccgccattcacgctcaagactcaacatctac
aaggccttggccagcccctctctcatcgcactgtcaagtgaagaccctttcctcacagcc
tttcagttaagttgggagcttcaggaactgagtaaggtggagaacgaattcaagtcagag
tatgaagagctgtcccgacagtgcaaacagtttgctaaggacctactggatcagacaagg
agctccagagaactggaaatcattcttaattacagagatgacagtagtctcatagaagaa
caaagcggaaatgatctcgcaagactaaaattggctataaagtaccggcaaaaagagttt
gttgctcagcccaactgtcaacaactgcttgcatctcgctggtatgatgagttcccgggc
tggaggagacgacactgggcagtgaagatggtgacgtgtttcataataggactccttttt
cccgtcttctctgtgtgctatcttatagctcctaaaagcccactgggactgttcatcaga
aagccctttatcaagttcatctgccacacagcgtcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggtggacttcaagattacatccatgattggtggaatctaatggattttgtg
atgaattccttatatttggcaacaatctctttgaaaatcgttgcatttgtaaagtacagt
gctctgaatccacgagaatcttgggacatgtggcatcccactctagtggctgaagcttta
tttgccatcgcaaacatcttcagttccctgcgcctgatctcactgtttactgcaaattct
cacctggggcctctgcaaatatctctgggaagaatgctcctggacattttgaagttccta
ttcatatactgccttgtgttgctagcatttgcaaatggcctaaatcaattgtatttctat
tatgaagaaacaaaagagttaagctgtaaaggcatacgatgtgaaaagcagaacaatgca
ttttcaacgttatttgagacactccagtccctattttggtcaatatttgggctcatcaat
ttatatgtgaccaatgtcaaagcacagcatgaattcactgagtttgttggtgccacgatg
tttgggacatacaatgtcatctctctggtggtcctactcaacatgttaatagctatgatg
aataattcgtaccaactcattgctgaccatgcagatatagaatggaagtttgctcgaaca
aagctttggatgagttatttcgaagaaggaggtactctgcccactcccttcaatgtcatc
ccgagccccaagtctctctggtacctgatcaaatggatatggacccacctgtgcaagaaa
aagatgagaagaaagcctgaaagttttggaacaataggggtaagaacacagcataggcga
gctgctgataatttgagaagacatcaccagtatcaagaggttatgcggaacctggtgaag
aggtatgttgctgcaatgatcagagatgccaaaactgaagaaggtctgactgaagagaac
tttaaggaactaaagcaagacatttctagtttccgctttgaagtcctggggttactaaga
ggaagcaagctctctaccgtccagtcggctcaggccacaaaggagtcctccaactctgcg
gactcggatgaaaagagtgacaacgaaggcagtagcaaagacaagaaaaagaacttcagc
cttttcgatttaaccaccctgattcacccgcgatcggcagcgattgcctccgaaagacac
aacatcagcaatggctccgccctagtggtgcaagagcccccaagagagaagcagagaaaa
gtgaactttgtgaccgatatcaaaaacttcgggttatttcacagacggtcaaaacaaaac
gctgctgagcaaaatgcaaaccaaatcttctctgtctcagaagaagttgctcgtcagcag
gccgaaagaccactggagaggaatattcaactggaatcccgagggttagcttcgcggggt
gacttgaacatccctggtctcagtgaacagtgtatcttagtagaccatcgagaaaggaac
acggacaccctgggtttacaggtgggcaagagagtgtgttccttcaagtcggagaaggtg
gtggtggaggacactgttccaataataccaaaggagaagcacgcaaaggaagaggactcc
agtatagactatgatggaaacctcacggacacagccacccacgaagattatgtgaccaca
agattgtga
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