Lynx rufus (bobcat): 124511055
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Entry
124511055 CDS
T08475
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9 isoform X1
KO
K18735
protein SMG9
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124511055
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124511055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
DUF6079_1st
AAA_30
Motif
Other DBs
NCBI-GeneID:
124511055
NCBI-ProteinID:
XP_046933874
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MSESGHSQPGLYGIERRRRWKEPGPGGPQNLSGPGGRERDYIAPWERERRDGSEETSTAV
MQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPAAATTTSTPE
GAAPAPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSTSSGSDEG
TEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDSEVNLFLVPFMDSEAESENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtctggccatagtcagcctgggctctatgggatagagaggcggcgacgctgg
aaagagcctggccccggtggcccccagaacctctccgggcctggtggtcgggagagggac
tacattgccccatgggagagagagagacgggatggcagcgaagagaccagcacggcggtc
atgcagaaaacccccatcatcctctcgaaacctccagcagagcggtctaagcagccacca
cccccaacagccccggctgccccacctgccccagcccctcttgagaagcctatcgtcctc
atgaaaccacgggaagaggggaaagggcctgcggctgcgacaaccacctccacccccgag
ggcgctgccccagcaccccctgcagcccccgcaccacccaagggagagaaggagggacag
agacccacgcagcccgtgtaccagatccagaaccgaggcatgggcactgccgcacccgca
gccatggaccctgtcgtgggccaggccaaactactgcccccagaacgcatgaagcacagc
atcaagttggtagatgaccagatgaattggtgtgacagcgccattgagtacctgttggat
cagaccgatgtgttggtggttggtgtcctgggccttcaggggacaggcaagtccatggtc
atgtcattgttgtcagcgaacactcctgaggaggaccagagggcgtacgttttccgggcc
cagagtgccgagatgaaggaacgagggggcaaccagaccagtggcattgacttctttatt
acccaagagcggattgttttcctggacacacagcccatcctgagcccctccatcttggac
caccttatcaacaatgaccgcaagctgcctccagagtacaacctgccccacacctacgtt
gagatgcagtcgctccagatcgcggccttcctcttcacggtctgccacgtggtgatcgtt
gtccaggactggttcacagacctcagtttatacaggttcctccagacggcagagatggtg
aagccctctaccccatcccccagccacgagtccagcacttcctcaggctctgacgaaggc
actgagtactacccccacctggtcttcctgcagaacaaagctcgccgagaggacttctgt
cctagaaagctgcgccagatgcacctgatgattgaccagctcatggctcactcccacttg
cgttacaagggtactctgtccatgttacagtgcaacgtcttccctgggctcccacctgac
ttcctggactctgaggtcaatttgttcctggtgcccttcatggacagcgaagcagagagt
gaaaacccacctcgggcaggacccggttccagccctctcttctccctgctccctgggtac
cgtggccaccccagtttccagtccctggtgagcaagctccggagccaagtgatgtccatg
gcccggccacagctgtcacacaccatcctcacggagaagaactggttccactacgctgcc
cggatctgggacggcgtaaagaagtcctctgccctggcggagtacagccgcctgctggcc
tga
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