Lynx rufus (bobcat): 124511857
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Entry
124511857 CDS
T08475
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04022
cGMP-PKG signaling pathway
lruf04024
cAMP signaling pathway
lruf04740
Olfactory transduction
lruf04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
124511857
04022 cGMP-PKG signaling pathway
124511857
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
124511857
04740 Olfactory transduction
124511857
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124511857
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124511857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
124511857
NCBI-ProteinID:
XP_046935203
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MWSWVQRVLPQPPGTSQKTKMEEEEEEGAEPEPEAELEPEPAPKTAPKEAELGDESLPPE
EPFEGEEVAAAEPGPQETQEAAPTPPTSLQAQVAVVPEVNSTPSGWVLTWLKKGMEKVVP
QPVLSSGPAQTTAAGLEGPTQAGAQIPGQRSNGSSDGLDVAPGAQDTGPGPWLLRWLEQN
LEKVLPQPPQSSKDWGDEPADAALGPDSCSACCLEPPGPPLEREPMLQAPESPNMPTAGP
LEPKEEPTSEPQATFHASSLPPAGDPARLMAWLRHRLEMALPQPVLHGKAGEQEPDSPVA
CDVQTVCILPGGQEEPDLVLEEVDPHWEEDEYQDRGTSPQGSEAAPAYEEENEAMEEMPR
ELPQIQEEREDEEEDGEEEEEEEEEEPNVLLDSCLVAQAGEHPSGVGRTQPQEAAHQEPQ
EEAVAASPEVPATEEHPEVQVEDADTDGHPVILENPPSPELPPPSPAKSDTLTVPGSAAG
TQRKGPPSQDDEAEELKALSPAESPMVAWSDPSSPQGTDGQDRATSTASQNSAIINDRLQ
ELVKLFKERTEKVKEKLIDPDVTSDEESPKPSPAKKAPESAPAVKPTEAGQAEEEEHYCD
MLCCKFKRRPWRTYKFPQSIDPLTNLMYILWLFFVVLAWNWNCWLIPVRWAFPYQTPNNI
HLWLAMDYLCDLIYFLDITVFQLRLQFVRGGDIITDKKEMRNNYLKSRRFKMDVLCLLPL
DFLYLKFGVNSLLRLPRCLKYMAFFEFNSRLESILSKAYIYRVIRTTAYLLYSLHLNSCL
YYWASAYQGIGSTHWVYDGVGNGYIRCYYWAVKTLITIGGLPDPKTLFEIIFQGLNYFTG
VFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPRSVQNRVKTWYEYTWQSQ
GMLDESELMVQLPDKMRLDLAIDVNYNIVSKVALFQGCDRQLIFDMLKRLRSVVYLPNDY
VCKKGEIGREMYIIQAGQVQVLGGPDGKAVLVTLKAGSVFGEISLLAVGGGNRRTANVVA
HGFTNLFILDKKDLNEILVHYPESQKLLRKKARRMLRNNNKPKEKSVFILPPRAGTPKLF
NAALAIAGKMGAKGAKAGKLAHLRARLKELAALEAAARQQELLEQAKSSQDTAGEAGSAA
PDQPAPPEPPAHSSPPPASPERPEEGREGAAGPEEHSVQIRMSPGPDPGEQILLVEIPEE
KEIPEEEEIPEEKEIPEEKKEIPEEKKEIPEEKKEIPEEKEIPEEEEIPEEKEISEEKKE
IPEEKKEIPEEKKEIP
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgtggagctgggtccagagggtgctgcctcagcccccagggacctcccagaagacaaag
atggaggaggaggaggaggagggggcagaaccagaaccggaggcagagctggaaccagag
ccggcgcctaaaacagccccgaaggaggccgagctaggggacgaatccctgccaccggag
gagccatttgagggggaggaagtggctgcagctgagccaggccctcaggaaacccaggag
gctgcccctactccacccacatccctccaagcccaggttgctgtggttcccgaagtgaac
agcactcccagtggctgggtgctgacctggctcaagaaaggcatggagaaagttgtccca
cagccggtcctcagcagcgggccagcccagaccactgctgctggcttggaaggccccacc
caggcaggagcacagatccctgggcaacgcagcaatgggagctcagatggactcgatgtg
gcccctggggcccaggacactgggcctgggccctggctgctcaggtggcttgagcagaat
ctggagaaagtgctgcctcagcccccccagagctccaaggactggggagatgagcctgca
gatgctgccttgggcccagactcctgctctgcctgctgcttagagcccccaggaccccct
ttggaaagggagcccatgctgcaggccccggagagccccaacatgcccactgctggcccc
ctggagcccaaggaagagccaacttcagagccccaggccaccttccatgcttcctccttg
ccgcctgctggggaccctgccaggttgatggcttggctccggcacaggctggagatggcc
ctgccgcaacccgtgctccatgggaaggctggtgagcaggaacctgattcccctgtggcg
tgtgacgtgcagaccgtctgcatcctccctggaggccaagaggagcccgatctcgtccta
gaagaggttgaccctcactgggaggaggacgagtatcaggaccggggaaccagtccgcag
ggctcagaggcagctccagcttatgaagaggagaatgaggccatggaggagatgcccagg
gagctgccccagattcaagaggagagagaagatgaggaggaagatggagaggaagaggaa
gaagaggaggaggaggagcctaacgtcctgctggatagctgtctggtggcacaggctggc
gagcacccgagcggagtaggcaggacccagccccaggaggccgcccaccaggagccacag
gaggaggccgtggctgccagcccagaagtgcctgccacagaagagcacccggaagtgcag
gtggaagatgccgatactgacggccaccccgtcatcttggagaaccctccctcacctgag
ctgccgccaccttctcctgccaaatcggacacccttacggtcccgggatctgccgcaggg
acgcaaaggaaggggccgccctcccaggatgatgaggctgaagagctcaaggcactgtcg
ccagctgagtctcccatggtcgcctggtcagacccgtccagtccgcagggcactgatggc
caggaccgcgcaacctccacggccagccagaacagcgccatcatcaacgaccggctccag
gagctggtgaagcttttcaaggagcggacagagaaggtgaaggagaagctcatcgacccc
gatgtcacgtctgatgaggagagccccaagccctctccagccaagaaagccccagagtcg
gccccggcggtaaaacccaccgaagcgggacaggcggaggaagaggaacactattgtgac
atgctctgctgcaagttcaagcgccgcccctggaggacgtacaagtttccccagagcatt
gacccgctgaccaacctgatgtacatcctgtggctgttcttcgtggtgctggcgtggaat
tggaactgctggctgattcctgtgcgctgggccttcccctaccagacgccaaacaacatc
cacctctggttggcgatggattatctgtgtgacctcatctacttcctggacatcaccgtg
ttccagctgcgcctgcagtttgtcagagggggagacatcattacggacaagaaggagatg
cgcaataactacctgaaatctcgtcgctttaagatggacgtgctctgcctcctgcccttg
gactttctctacttgaagttcggtgtgaattccctcctgcgcttgccccgctgtttgaag
tacatggccttcttcgagtttaacagccgcctggaatccatcctcagcaaagcctacatt
tacagggtgatcaggaccacggcttacctgctctacagtctgcatttgaactcatgtctg
tattactgggcgtcagcctatcagggcatcggctccactcactgggtttacgatggcgtg
ggaaacggctacattcgctgttactactgggctgtgaagaccctcatcactattggtggg
ctgcctgaccccaagacactcttcgaaattatcttccaggggctgaactatttcaccggt
gtctttgctttctctgtgatgatcggacagatgagagacgtggtgggggccgccactgca
gggcagacctactaccgcagctgcatggacagcacagtgaagtacatgaacttctacaag
atccccaggtccgtacagaaccgtgtcaagacctggtacgaatacacctggcagtcccaa
ggcatgctggatgagtcagaactgatggtgcagcttccggacaagatgcggttagacctc
gccatcgatgtgaactataacattgtcagtaaagtggctctcttccagggctgtgaccga
cagttgatctttgacatgctgaagaggcttcgttctgtcgtctacctgcccaatgactat
gtgtgcaagaagggggagataggccgagagatgtacatcatccaggcaggacaggtgcaa
gtcttgggtggccctgatgggaaggccgtgctggtgacgctgaaggctggatctgtgttt
ggagaaataagcttgctggctgttggtggcgggaatcgtcgcaccgccaatgtggtcgcc
cacgggttcaccaacctcttcattctggataagaaggacctgaatgaaattttggtgcat
tatcccgagtctcagaagttactccggaagaaggccaggcgcatgctaagaaataacaac
aagcccaaggagaagagcgtgttcatccttcctccccgggcaggcacccccaagctgttc
aacgccgccctggccatagcaggaaagatgggcgccaagggggcaaaagccggcaagctt
gcccacctgagggcccggctcaaggaactggctgcgctggaggcagcagcgaggcagcag
gagttgctggaacaggccaagagctcgcaagacactgcgggagaggcgggatccgccgcc
ccagaccagccagcaccgccagagcccccagcccacagctctccgccacctgcctcccct
gagaggcccgaggaaggcagggaaggggcggctgggccggaggagcactcggtgcagatc
cgcatgagcccaggcccagatcccggtgaacagatcctgttggtggagatcccggaggag
aaggagatccccgaggaggaggagatcccggaggagaaggagatcccggaggagaagaag
gagatcccggaggagaagaaggagatcccggaggagaagaaggagatcccggaggagaag
gagatccccgaagaggaggagatcccggaggagaaggagatctcggaggagaagaaggag
atcccggaggagaagaaggagatccccgaggagaagaaggagatcccc
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