Lynx rufus (bobcat): 124512082
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Entry
124512082 CDS
T08475
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04510
Focal adhesion
lruf04517
IgSF CAM signaling
lruf04520
Adherens junction
lruf04530
Tight junction
lruf04670
Leukocyte transendothelial migration
lruf04810
Regulation of actin cytoskeleton
lruf05146
Amoebiasis
lruf05203
Viral carcinogenesis
lruf05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124512082
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124512082
04520 Adherens junction
124512082
04530 Tight junction
124512082
09142 Cell motility
04810 Regulation of actin cytoskeleton
124512082
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
124512082
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
124512082
09174 Infectious disease: parasitic
05146 Amoebiasis
124512082
09163 Immune disease
05322 Systemic lupus erythematosus
124512082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124512082
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lruf04812
]
124512082
04147 Exosome [BR:
lruf04147
]
124512082
Membrane trafficking [BR:
lruf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124512082
Cytoskeleton proteins [BR:
lruf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124512082
Exosome [BR:
lruf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124512082
Exosomal proteins of colorectal cancer cells
124512082
Exosomal proteins of bladder cancer cells
124512082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
124512082
NCBI-ProteinID:
XP_046935404
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MCLGEAWSAREPGPWWLSEAALLSPHRRHASLIWLQVGYLVYSVAPPVEKAPLSTEASLV
RSAKSGRPGLCTETFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPER
GKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVE
ETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPL
TNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRI
CKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTMHAMQQKLEDFRDYRRL
HKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQAEKGYEEWL
LNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHEAFES
DLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEK
LLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDAD
KERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINSKWDHVRQLVPRRDQALTEEH
ARQQHNERLRKQFAAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLSHLRQYEKSIVNYK
PKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKG
ISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDPQGEAEFARIMSIVDPN
RLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIA
RMAPYTGPDAVPGALDYMSFSTALYGESDL
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctgggagaggcgtggtcagcacgtgagcctgggccctggtggctcagtgaggcg
gcgctgctctccccccaccgccgccacgccagccttatttggctgcaggtgggttatctt
gtttactctgttgcgccaccagtagaaaaggcacctttgtcaacggaggcttctctggtg
aggtcagccaagagtggacggcctggattgtgcacagagacgttcacggcatggtgcaac
tcccaccttcgcaaggcggggacgcagatcgagaacatcgaggaggacttccgggacgga
ctaaagctcatgctgctgctggaggtcatctcaggggagcgcttggccaagccggagaga
ggcaaaatgagagtgcacaagatctccaacgtcaacaaggccctggatttcatcgccagc
aagggagtcaagctcgtgtccattggagccgaagaaatcgtggatgggaacgtgaaaatg
accctgggcatgatctggaccatcatactccgcttcgccatccaggacatctctgtggaa
gagacttccgcgaaggaggggctgctcttgtggtgtcagagaaagacggccccttacaaa
aacgtcaacattcagaacttccacataagctggaaggacggcctcggcttctgtgccttg
atccaccgacaccggcctgagctgattgactatgggaagctgcggaaggatgacccactc
acaaatctgaacacagcctttgatgtggcagagaagtacctagacatccccaagatgctg
gatgctgaagacatcgtcggaaccgcccgaccggatgagaaagccatcatgacttacgtg
tccagcttctaccatgccttctccggagcccagaaggcggagacagcagccaatcgcatc
tgcaaggtgttggccgtcaaccaggagaacgagcagcttatggaagactatgagaagctg
gccagcgatctgctggagtggatccgccgcaccatcccgtggctggagaaccgggcgccg
gagaacaccatgcacgccatgcagcagaagctggaggacttccgggactaccggcgtctg
cacaagccacccaaggtgcaggagaagtgccagctggagatcaacttcaacacactgcag
accaagctgcgcctcagcaaccggcccgccttcatgccctccgagggcaggatggtctcg
gacatcaacaatgcctggggctgcctagagcaggcagagaagggctatgaggagtggctg
ctgaacgagatccggaggctggagcggctcgaccacctggcagagaaattccggcagaaa
gcctccatccacgaggcctggacggacggcaaagaggctatgctacggcagaaggattac
gagaccgccactctctcggagatcaaggccctgctcaagaagcatgaggcctttgagagt
gatctcgccgcccaccaggaccgcgtggagcaaattgccgccatcgcacaggaactcaat
gagctggactattacgactcacccagtgtcaacgcccggtgccaaaagatctgtgaccag
tgggacaatctgggagccctaacccagaagcggagggaagctctggagcggacagagaaa
ctgctggagaccattgaccagctgtacctggagtatgccaagcgggctgcacccttcaac
aactggatggagggggccatggaggatctgcaggacaccttcatcgtgcacaccatcgag
gagatccagggactgaccacagcccatgagcagttcaaggccaccctccctgatgccgac
aaggaacgcctggccatcctgggtatccacaacgaggtgtccaagattgtccagacctac
cacgtcaacatggcgggcaccaacccctacacaaccatcactcctcaggagatcaatagc
aagtgggaccatgtgcggcagttggtgccacggagggaccaggccctgacggaggagcat
gcccgccagcagcacaatgagaggctacgcaagcagttcgcagcccaggccaatgtcatc
gggccctggattcagaccaagatggaggagattgggcggatctccattgagatgcacggg
accctggaggaccagctcagccacctgcggcagtatgagaagagcatcgtcaactacaag
cccaagatcgaccagctggagggcgaccaccagctcatccaggaggctctcatcttcgac
aacaagcacactaactacaccatggagcacatccgtgtgggctgggagcagctcctcacc
accatcgccaggaccatcaatgaggtggagaatcagatcctgacccgagacgccaaaggc
atcagccaggagcagatgaacgagttccgagcttccttcaaccactttgaccgggatcac
tccggcacgctgggtcccgaggagttcaaagcctgcctcatcagcttgggttatgatatt
ggcaacgacccccagggagaggcagaatttgcccgcatcatgagcattgtggaccccaac
cgcctgggggtagtgacgttccaggccttcatcgactttatgtctcgggagacggccgac
acggacacagcagaccaagtcatggcctccttcaagatcctggctggggacaagaactac
atcacggtggacgagctgcgccgagagctgccgccggatcaggcggagtactgcatcgcc
cggatggccccctacaccggccccgacgccgtgcccggtgctctggactacatgtccttc
tccacggcgctgtacggcgagagcgacctctaa
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