Lynx rufus (bobcat): 124519205
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Entry
124519205 CDS
T08475
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124519205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124519205
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
124519205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_17
TPR_8
TPR_14
TPR_11
TPR_CcmH_CycH
TPR_12
ANAPC3
ARM_TT21_C
TPR_9
Sel1
ARM_TT21_2nd
Fis1_TPR_C
TPR_5
TPR_30
TPR_15
ARM_TT21_5th
TPR_20
TPR_6
BTAD
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
124519205
NCBI-ProteinID:
XP_046945255
LinkDB
All DBs
Position
Unknown
AA seq
1565 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKEDLAGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHLEVARTWHKLIKTRQEEGADNQELHQLWRRLTQLLAESTEDQNNETQQ
LLLTAFENALGLSENIPSEDHQVLYRHFIQCLSKFPHEIARLKKACEGMINIYPTVQYPL
EVLCLHLIESGSLTDEGQQYCRRLVEMDSKSGPGFIGLGIKALQDRKYEDAVRNLTEGLK
ESPLCTTGWYHLAEAQVKMHRPKEAVLSCSQALKNIDNLGVSGGSLHQKNLCLRLKAEAL
IKLSDYESSVEAICTLDQVSDANNIPGLLVLKSLAYLNKGSLDEASKIMEDLLSSYPDLA
EVHALEALIHFTKKDYPQAEKCFQRALEKDAEVAEYHYQLGLTYWFMGEETRKDKTKALT
HFLKAARLDTYMGKVFCYLGHYYRDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAIAQYQLIIK
KKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTWALQHRADVSCLWKLV
GDACTSLYAVSPSKVNVNVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLAETGNNTNDLKELLEKSLQCLKKAVRLDSKNHLYWNALGVVSCYSGI
GNYALAQHCFIKSIQSEQINPVAWTNLGVLYLANENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRDTELYRYNIVQMN
AIPAAQVVLSKYIERIQNYAPAFTMLGYLNEHLQLRKEAAGAYQRAMLLLQSVEDQDTYN
VTVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSV
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSILKEPTTESLQALCALGLTMQDPTL
SKAALNELLKHIKQKDSNYHKCLLSSAIYALQGRSVAVQRQASKAVHSNPADPALWSLLS
RVVAQYTHRSAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSSSSEAEKNIALKTIQ
KAALLSPGDPAVWAGLMAACHAEDKLALVDNTEPKRMDLYLALLSAVSASIRDKEFLENY
NQSLEKWSLSQAVTGLIDTGRLAEAEGLCTKNLKSNPDQPAVILLLRQVQCKPLLDSQNP
LPDAVLEELQKTVMSNSTSVPAWQWLAHVYQCQGMMGAAEMCYRKSLQVASQQGSWSGKL
SSLLRLALLALKACMANIPNNHWSSLVQEATTEALKLCFCPLAVFLQALLQFNRKMGARE
TRRLLERVVYHQPGFPKSIVSTARWYLLRHLHAKNDYELIDVLVNNAKTHGDTRALELNQ
KLSSQ
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtaaagactgctctaaaaagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagccgagctagaacaacctgatcaggcccag
ggtgcctataagaaagctgctgaactagagccagaccaattgctggcttggcaggggtta
gcaagtttatatgagaaatgtaatcacataaatgctaaggaagacttagctggtgtttac
caaaagctcctggatctttatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctatattaccaagaaaagaaacacctagaggtggcccgaacatggcac
aaattgataaagacacggcaggaggaaggtgcagacaaccaagagcttcatcagctgtgg
aggagattgactcagttgctggctgagagtactgaggatcagaataatgagacccagcaa
ttgcttttaactgcttttgagaatgcactgggcttatcagaaaatattcctagtgaagat
caccaagtactttatagacatttcattcagtgtttatccaaatttcctcatgaaattgct
aggttgaagaaggcctgtgaaggaatgataaacatctatcccactgtacaatatccatta
gaagtgctttgtttgcatttgattgaatcaggcagtcttactgatgaaggacagcagtat
tgtcgcagactagtggaaatggattcaaaaagtggtccaggcttcattggtttggggatt
aaagcattacaagacagaaagtatgaagatgctgttaggaacctaactgaagggttaaag
gaaagccctctttgcacaacggggtggtatcatctggccgaagcccaagttaaaatgcat
agacctaaggaagctgttctttcatgcagtcaagctctgaagaacatagataatcttggt
gtgtctggtggcagtcttcatcagaagaatctttgtctccgtttgaaagcagaggctttg
attaaactctcagattatgaatcttcagtggaagcaatctgtactcttgatcaggtttct
gatgcaaataatatcccaggacttttggttcttaaaagcttggcctatctgaataaaggc
tcattagatgaagcttcaaagattatggaagaccttctctcttcttaccctgacctagct
gaagttcatgccctggaggctttgattcattttaccaaaaaggactatccacaagcagag
aaatgtttccagagagctcttgagaaagatgctgaagttgctgaatatcattaccaactt
gggttaacatattggttcatgggtgaagaaacaagaaaagataaaacaaaggctcttact
cactttctaaaggctgccagactggatacatacatgggcaaagttttctgctatttaggt
cattactacagagatgtggtaggagataaaaacagagcccgtggctgttacaggaaagcg
tttgagttagatgatactgatgctgaatctggagctgcagcagttgacttaagtgtggag
cttgaagagatggaaactgccttagccatcctaacaacagtaactcaaaaggcaagtgct
ggaacagcaaaatgggcctggctgaggcgcggactgtactatttgaaagctggtcagcat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgt
tgggagtcattaggagaggcatacttaagcagaggtggctataccacagccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggttgcagca
atacagcaaatcctaggcaaatataaggaggcgatagctcaataccagctgatcattaaa
aagaaagaagattatgtgccagctttgaaaggtttgggcgaatgccatcttatgatggca
aaagcagctctagtggattatcttgatgggaaagctgtggactacatagaaaaagcactg
gaatattttacttgggctctgcagcatcgagctgatgtgtcttgcctttggaagctagtt
ggggatgcttgtaccagtctgtatgctgtctcaccatctaaagtaaatgttaatgtttta
ggagtcctcctaggtcagaaagaaggaaaacaagtattaaagaagaatgagctcctccat
cttggaggaaggtgttatggtcgtgcattaaaactgatgtccacatctaatacatggtgt
gatctcggaattaattattaccgtcaagcacaacatctagcagaaacaggcaacaacaca
aatgatcttaaagagttgttggagaaatctttacagtgtctgaaaaaggcggtgagactc
gacagtaaaaaccatttatactggaatgctcttggcgtggtttcatgttacagtggtatt
ggaaactacgcccttgctcagcattgtttcatcaagtcaatccaatcagaacaaattaat
cctgttgcgtggaccaacttgggagtcttataccttgcaaatgaaaacattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttacttaatgtgctggattgga
caagctcttatcgcagagacagttggaagttatgacaccatggatcttttcaggcacact
acagagcttagtatgcataccgagggagcaataggttatgcttattgggtctgtacaaca
ttgcaagataaaagcaacagagatactgagctgtaccggtacaatatcgttcagatgaat
gctattccagccgcacaagttgttttgagtaaatacatagaaagaattcagaattatgct
ccagctttcacaatgttgggttacttaaatgaacatctacaactgagaaaggaagcagca
ggtgcataccaaagggcaatgttattgttacaaagtgtggaagaccaagatacttataat
gttacagtaagaaattatggcagattattatgttccattggtgaatatgataaagctatc
caggcttttaagtcaacacctcttgaagagttagaagacatcataggttttgcattggct
ttatttatgaaaggtctgtataaggaaagcagcaaagcctatgagagagccttgtctgtt
gttgaatcagagcaggacaaagcgcatatcttgacagctctagcaataacagagtataaa
caaggaaaaatggatgtagccaagacattgctatttaaatgctctatcttaaaggaacca
accacagaaagccttcaagctttgtgtgctctaggattgacaatgcaggatcctacactg
tcaaaagcggcacttaatgaattactgaagcacatcaaacagaaagacagtaattatcac
aagtgccttctttcttcagcaatttatgcactgcaaggccgcagtgtggcagtgcagaga
caagcatctaaagctgttcacagtaacccagctgatcctgctctttggtctctgttgtcc
cgagtagttgctcagtatactcaccgaagtgcaaagggaggtgctgttgcaggaaatgtg
gctcatattttggactcaaatcatggaaagaaggcgttactgtatactgcggtaaatcag
ttagctatgggaagcagttcatcagaagctgaaaaaaatattgcactaaagaccattcag
aaagcagctcttctttctccaggtgaccctgccgtctgggctgggctaatggcagcctgt
catgctgaagataagctggctctagtggacaacactgagccgaagagaatggatttgtac
ttggccctgttatctgctgtttctgcttcaattagagacaaagaattccttgaaaattat
aaccaatctctggaaaagtggtctctctcccaagctgtcactggtctaatagacacagga
agactagctgaagctgaaggcctctgcacaaagaatttaaaaagtaaccctgatcagccg
gctgttatcttacttctgagacaagttcagtgtaaaccactcctggattcacaaaaccct
ctcccagatgctgtacttgaagagctgcagaaaacagtcatgtccaattcaacttctgtt
ccagcgtggcagtggctggcacacgtgtatcagtgccaaggaatgatgggtgctgcagag
atgtgttatagaaagagtctacaagtagcatcccagcagggcagttggagtgggaagctg
tcaagtctgctgagactagctctacttgctttaaaagcctgcatggctaatattcccaat
aatcactggtcatctttggttcaagaagctacaactgaggccttgaaactttgcttttgt
ccattggctgtctttttacaagctttgttacaattcaaccgcaaaatgggggcaagagag
acacggcgacttttggaaagagtggtgtatcatcaaccggggtttcccaagtctattgta
tcaactgcacgttggtacctgctgagacacttacatgccaaaaatgactacgaacttatt
gatgtgctggtaaacaatgccaaaactcatggagatacaagagcattggaattgaatcag
aaattgtcctcacagtaa
DBGET
integrated database retrieval system
