Lynx rufus (bobcat): 124524447
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Entry
124524447 CDS
T08475
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04082
Neuroactive ligand signaling
lruf04721
Synaptic vesicle cycle
lruf04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124524447
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
124524447
04721 Synaptic vesicle cycle
124524447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lruf02000
]
124524447
Transporters [BR:
lruf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124524447
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124524447
NCBI-ProteinID:
XP_046952680
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MTAEKALPLGNGKAAEEARESEALGGGGGCSGGAAPARDPRDKRDKAVHERGHWNNKVEF
VLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGI
TCWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTEN
CVEFQKLNVSNHSHVSLQNATSPVMEFWERRVLAISGGIEHIGNLRWELALCLLAAWTIC
YFCIWKGTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVW
VDAGTQIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFM
AYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWAALFFMMLIFLGLDSQFVCVESLV
TAVVDMYPKVFRRGYRRELLILALSVVSYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFV
AIFECICIGWVYGSNRFYDNIEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLK
YNNMYTYPTWGYGIGWLMALSSMLCIPLWVFIKVWKTEGTLPEKFRKLTIPSADLKMRGK
LGGGPRTVMVNDCDAKLKGDGTIAAITEKETHF
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggagaaggcgctgcctctgggcaatgggaaggctgccgaggaggcgcgggag
tctgaggcgctgggaggcggcggcggctgcagcgggggcgcggcgcccgcgcgcgacccg
cgcgacaagcgcgacaaggcggtccacgagcgcggccactggaacaacaaggtggagttc
gtgctgagcgtggctggggagatcatcgggctggggaacgtgtggcgcttcccttacctg
tgctacaagaacggaggaggggcgttcctgattccctatgtggtgttttttatttgctgt
ggaattcctgtttttttcttggaaacagctctgggacagttcacgagtgaaggtggcatt
acatgttggaggaaagtttgccctttgtttgaaggcattggctatgcaacacaggtgatc
gaggcccatctaaacgtgtactacatcattatcctggcatgggccattttctacctgagc
aactgcttcaccaccgagctcccctgggctacctgtgggcatgagtggaacacagagaat
tgtgtggagttccagaaactgaacgtgagcaaccacagtcatgtgtccctgcagaatgcc
acctctcccgtcatggagttttgggagcgccgggtcctggccatctcaggtgggatcgag
cacattggtaacctccgttgggagctggccttgtgtctcctggcagcctggaccatctgc
tacttctgcatctggaaggggaccaagtccacaggaaaggttgtatacgtcactgcaaca
tttccctatatcatgcttctgatcctcctgatccgaggggtcaccttgcctggggcctcc
gaaggcatcaagttctacctgtatcctgacctctcccggctctccgacccacaggtctgg
gtagatgctgggacacagatctttttctcctatgccatctgcctgggttgcctgactgct
ctgggaagttataacaattataacaacaactgctacagggactgcatcatgctgtgttgc
ctgaacagtggcaccagctttgtggctggctttgccatcttctcagtcctgggcttcatg
gcatacgagcagggggtgcccattgccgaggtggcagagtcaggccccggcctggccttt
attgcttaccccaaggctgtcaccatgatgcctctctccccactgtgggctgccttgttc
ttcatgatgctgatcttcttgggcctggacagccagtttgtgtgcgtggaaagcctcgtg
accgctgtggtggacatgtaccccaaggtctttcggaggggctaccggcgggagctgctc
atcctggctctatcagtcgtctcctatttcctgggccttgtgatgctaacggagggtggc
atgtacatcttccagctcttcgactcctatgctgccagcgggatgtgccttctctttgtg
gccatctttgagtgtatctgcatcggctgggtgtatggaagcaatcgcttctacgataac
atcgaagacatgattggctaccggccactgtcgctcattaaatggtgctggaaggttgtg
acccccgggatctgtgcgggcatcttcatcttcttcctggtcaagtacaagcctctcaag
tacaacaacatgtatacctaccctacctggggctacggaattggctggctcatggcactc
tcgtccatgctgtgcatcccactctgggtcttcatcaaggtgtggaagacagaggggacg
ctgcctgagaaattccggaagttgaccatccccagcgctgatctgaaaatgcggggcaag
cttgggggaggcccacggacggtgatggttaatgactgtgacgccaaactcaagggcgat
gggaccattgcagccatcacagagaaggagacacacttctga
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