Luteibacter rhizovicinus DSM 16549: BJI69_04600
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Entry
BJI69_04600 CDS
T04563
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lrz
Luteibacter rhizovicinus DSM 16549
Pathway
lrz03420
Nucleotide excision repair
lrz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJI69_04600
03430 Mismatch repair
BJI69_04600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrz03400
]
BJI69_04600
Enzymes [BR:
lrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJI69_04600
DNA repair and recombination proteins [BR:
lrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJI69_04600
MMR (mismatch excision repair)
Other MMR factors
BJI69_04600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
DUF3553
Motif
Other DBs
NCBI-ProteinID:
APG03259
UniProt:
A0A0G9H5C3
LinkDB
All DBs
Position
993935..996151
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AA seq
738 aa
AA seq
DB search
MDVSHLLDSLNDAQREAVSAPPGHYLILAGAGSGKTRVLINRIGWLTQVERVPPWAILAV
TFTNKAAGEMRTRLDGIIPGGTQGLTVGTFHGIAHRLLRRHWREAGLVEGFQILDSDDQQ
RLIKRIIAGLGLDEARFPPRQASWQINNWKDEGKRPDGIEHRDHPVTRTFVEIYKAYEQQ
CQRAGLVDFAELLLRAHELWLKDPQVLKHYQDRWRYLLIDEFQDTNTLQYAWIRVLAGST
GQAFVVGDDDQAIYGWRGAKVENVQQFLNDFPGAKTIRLEQNYRSTSTILNAANAVISRN
GGRLGKQLWTDGGEGERIALYAAYNEQDEARFVIERIREHIAETGNARDCAILYRSNAQS
RNFEEQLIQRDLPYRVYGGLRFFERAEIKDALAYLRLASNRHDDAAFERAVNTPPRGIGD
RTLDELRRRARNDSSSMWEAMLTEASIGGLAGRAKNALKAFIGMIDNLARTFGGHDKLDG
DESPTALSLAEQIEHAILHTGLRDFYENDKRGNGEARVENLDELVNVASRFEMTPEDVDA
GLNELSAFLSHASLEAGEGQGEAWDDCVQLMTLHSAKGLEFPIVFLVGMEEGLFPSQRST
EEENRLEEERRLAYVGITRARERLYVSHAESRRMHGTEMLARPSRFLGEIPPELIDELRP
RVQVSRPAYADRYAGGGGSSSLVEASPIALGQRVSHPKFGEGTVVSAEGAGAHMRLQVNF
EDAGSKWLVYAYANLTAL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcccatctcctcgattccctcaacgacgcccagcgcgaggccgtcagtgcc
ccgcccgggcactatctgatcctcgctggcgccggctccggtaagacccgtgtcctgatc
aaccgtatcggttggctgacccaggtcgagcgggtgccgccgtgggcgattctcgccgtg
acctttaccaacaaggccgccggcgagatgcgcacacggctggacgggatcatccccggc
ggcacgcagggcctcacggtcggcaccttccacggcatcgcccaccggctcctccggcgc
cactggcgcgaggcggggctggtcgaaggcttccagatcctcgattccgacgaccagcaa
cggctgatcaaacgcatcatcgcgggactggggctcgacgaggcccggttcccgccgcgc
caggccagctggcagatcaacaactggaaggacgaaggcaaacggccggacggcatcgag
catcgcgaccatccggtgacgcgtaccttcgtcgagatctacaaggcctacgagcagcag
tgccagcgtgccggcctggtcgacttcgccgagctgctgctgcgcgcgcacgagctgtgg
ctgaaggatccccaggtgctcaagcactaccaggatcgctggcgctacctgctgatcgac
gagttccaggacaccaacacgctgcaatacgcgtggatccgcgtgctcgccggcagcacc
ggccaggccttcgtggtcggcgacgacgatcaggccatctacggctggcgcggcgcgaag
gtcgagaacgtgcagcagttcctcaacgatttccccggtgcgaagacgatccgcctggag
cagaactatcgctccacctcgacgatcctcaatgccgcgaacgcggtcatctcgcgcaac
ggcggccgcctcggcaagcagctctggacagatggcggcgagggcgagcgcattgcgctg
tacgccgcctacaacgaacaggacgaagctcgcttcgtcatcgagcgcattcgcgaacac
atcgccgagaccggcaacgcgcgcgattgcgccatcctctaccgttccaacgcgcagtca
cgcaacttcgaagaacagctgatccagcgcgacctgccctaccgtgtctatggcggcctg
cgcttcttcgagcgcgccgaaatcaaggacgccctggcttacctgcgcctggcgtcgaac
cgccatgacgacgccgccttcgagcgcgccgtgaatacgccgccacgcggaatcggtgac
cgcacgctcgacgagttgcgtcgccgcgcgcggaacgacagtagctcgatgtgggaggcc
atgctcaccgaagcctccatcggcggtctcgccggacgcgcgaagaacgcgctcaaggcg
ttcatcggcatgatcgacaacctggcgcgcacgtttggcggtcacgacaaactcgacggt
gacgaatcaccgacggcgctgagcctcgccgagcagatcgagcacgccatcctccacacc
ggcttgcgcgacttctacgaaaacgacaagcgcggcaacggcgaggcgcgcgtcgagaac
ctcgacgaactggtcaacgtcgccagccgcttcgaaatgacgccggaagatgtcgacgcc
ggcctcaacgaactctcggccttcctttcccacgcctcactggaagccggtgaaggccag
ggcgaggcctgggacgactgcgtccagctcatgacgctgcattcggccaaagggctcgag
tttcccatcgtgttcctcgtcggcatggaagaaggcctgttccccagccagcgttccacc
gaggaagagaatcgcctcgaggaagaacggcgtctggcctatgtgggcatcacacgggct
cgcgagcgcctgtacgtctcccacgcggagtcgcgccgcatgcacggcacggagatgctg
gcgcggccttcccggttccttggcgagatcccgccggaactgatcgacgagttgcgcccc
cgcgtgcaggtgtcgcgaccggcctacgccgaccgctatgcgggcggaggcggcagcagt
tcgctggtggaagcatcccccatcgcgctcggtcagcgcgtgagccatccgaaattcggc
gaaggcacggtggtcagtgccgagggcgccggcgcccacatgcggctccaggtgaacttc
gaggatgccgggagcaagtggttggtttacgcttacgcgaatctgaccgcgttgtaa
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