Littorina saxatilis: 138966639
Help
Entry
138966639 CDS
T10665
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lsax Littorina saxatilis
Pathway
lsax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138966639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsax03021
]
138966639
Enzymes [BR:
lsax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138966639
Transcription machinery [BR:
lsax03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
138966639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
138966639
NCBI-ProteinID:
XP_070195032
LinkDB
All DBs
Position
LG5:24446255..24489780
Genome browser
AA seq
1706 aa
AA seq
DB search
MEDSLIVDRLSEVGFRVYSENEILKLSVKEITNPQLFDNLQLPTIGGLYDPALGSTRNDD
VCTSCGQSGRYCPGHMGHINLALPVFNPVFFKTLLKILQGTCLSCHRLYVSEVEGLLFAH
QMELLDKGDVVAAKELRDFVWQCEAEKGDDVDTFKEELMEKVEKLAEELMKDVSADATVC
TKMADTEISLLVSSMLKRYFATPKVCPHCRSETLVLRQEYFSRISAKSGRDKRSSAKRAP
PKRKPPAAETEADMEVEMEESEERDEVDSLLAKGKGQCLIMPHLARQILRKVWQKDHKVL
RKVFRCLEEISLTKYPTDMFFLIALLVPPSRFRPMSVMGDRKFENPQTSNLARALLDNYE
IRQLLVNMNLDLNNSKDLTVEQETTTPMEELQNKWILLQTHVNCLIDSDLDKLSPDANKI
PGIRQLLEKKEGLFRMHMMGKRVNYAARSVISPDPCINTNEIGVPVVFAQKLTYPQPVTP
WNVHELRQNVINGPNNYPGASAVVNEDGSVTKLSTHSQTQREAVAKQLLTPGDASGKNLL
PKQVLRHLKDGDVMLLNRQPTLHRPSIQAHRARVLTGLKTLRLHYSNCKAYNADFDGDEM
NAHFPQSELCRAEAYGIASTDFQYLVPKDGSPLAGLIQDHLVAGVSLTVRGQFFNRDDYF
NLLQSALTNTRGKLKLLPPSIIKPCKLWSGKQVVSTLLLNIIPKDKPPLSMEGKAKIKEK
SWIQRHMDKDKPYLTLAEAQRMTEDLGESTVIVDHGELLQGILDKAQCGPSSFGLVHCVY
ELYGGEVAGMLLTCMGRLFTAFLKLRGFTLGIEDILVQDEAEVRRKKKITKAPKEGHKAA
LEAFGMTGEDCSDAELLRLLKEAQFGKDDMALKQLDNSAKKITNDVSEKISLTIIGKHLF
KSFPDNNLQLMVQSGAKGGSVNCIQISSMLGQIELEGRRPPLMKSGRSLPSYLPYDLSLK
AGGFVTGRFLTGIRPQEYFFHCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGLTVNYDMT
VRDSDSSVIQFLYGEDGLEVCKTPFLEEKQFPFLLKNQDVLDNDADQSKGNKRVEKHKKK
VNKWQKKHTKGRTRASGFLNFCSAQHQERQPGDTKPSENTGRSARSSALEVEWRGLGPDR
KHKLTKKHRPCPDPVISKYWPQLHTGVISENMQESVKLIQQQLLEVGENSNERTKEESVT
KCKALPRLVHNKVMKSLAEPGEAVGLLCAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPR
LREVLMTASSNILTPSMEIPIHDTPQAQAGAESLQKILSRVYLSDVLQEMQIYDYLHSSS
PSASTKVDRKRLYRIHFTLLPKKCYSDKLKMKPKEIVRHIEKELIGRIAKAARKVMDKRE
MEKPENLISESTLRSMERKEEDATADPAADDADSDVEMGDGDSTATKALARHTDTNEYEG
EEEEREEVGDATQPDDMEEDAPEEGEEAMQEGEDDDDNHDAQQEAQDIEAVKSLGCVHNY
QRDKKGKWCEVILQFNAARFLVDMKSVVDREAGRLVLQQVKGIKRCMLLKQPDRYTGQSR
LHLVAEGINLQEMMKYSHILDLNSLYTNSIHDIQNTYGIEAANRAIVKEVQNVFKPYEIS
VNPRHLSLLADYMTCEGSYKGFNRLAMSSNPSPLQKITFETSMNFLVSACMNARPDQLRS
PSARIVAGQVVSSGTGCFEIVQPLQV
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagcttgattgtagaccgtctgtcagaggtggggttcagggtgtacagcgaa
aatgaaatcctgaaactgagtgtgaaggagataaccaatccacaactgtttgacaacctc
cagttgcccactattggtggattgtacgatcctgctttggggtcaacacggaatgacgac
gtgtgtacaagctgcggtcagtcaggacggtactgtcccggtcacatgggtcacatcaac
ctggctctgccggtcttcaacccggtcttcttcaaaactctcctcaagattttgcaggga
acatgcctgtcctgccaccgtctctacgtgtcagaagtggaaggtttgctgttcgcgcat
cagatggagctgctggataaaggggacgtggtggcggcgaaagagctgcgagattttgtg
tggcagtgtgaggcggagaaaggagatgacgtagacaccttcaaggaggagttgatggaa
aaggtggaaaagctggcagaagaattaatgaaagatgtctcagctgatgccactgtgtgt
acaaagatggcagacacagaaatatctcttctagtgagcagcatgttgaaacgatatttt
gccacacccaaagtttgtccccattgtcgcagtgaaactttggtacttcgtcaggaatat
ttcagtcgtatctctgccaaaagtggccgggacaaaaggtccagtgccaaaagagcacca
cccaagagaaaaccaccggcagcagagacagaagcagacatggaagtggagatggaagag
tcggaagaacgtgacgaggtcgacagtttgctggcaaagggcaaaggtcaatgcctgatc
atgccgcacttagctcgtcagattcttcgcaaggtgtggcagaaagaccacaaggtgtta
cgcaaagtgttccgttgtctggaggagatttctctcaccaaatatcccactgacatgttc
tttctcatcgctttgcttgtgccaccatctcgcttcagaccgatgagtgtgatgggagat
cggaagtttgaaaaccctcagacttcaaaccttgctcgcgcgctcttggacaactatgag
atacgacagctccttgtcaacatgaaccttgacctcaacaactcaaaagatcttacagtg
gaacaggagaccacaacaccgatggaagagctgcagaacaagtggatcctgctacagaca
cacgtcaactgtctgattgacagcgacctcgacaaactctcacctgacgccaacaagatt
ccaggcattcgacagttactggagaagaaggaagggttgttccgcatgcacatgatgggc
aaacgagtcaactacgccgctcgttcggttatctcccctgacccctgcatcaacaccaac
gagatcggggtacctgtcgtcttcgctcagaagttgacctacccacaacctgtcaccccc
tggaatgtgcatgaactgcgccagaatgtcatcaatggtcccaataactacccaggggcc
tctgctgtggtgaatgaagatggcagtgtgacgaagctcagcacccattctcagacacaa
agagaagctgttgctaagcaactcttgactccaggtgatgcttcagggaaaaatctgctc
cccaaacaggtattgagacacttgaaggatggtgatgtgatgctcctcaacagacagcct
actcttcacaggcccagcatacaggctcacagggctcgagtgctgacaggattgaagacc
ctgcgactgcattactccaattgcaaggcctacaacgctgactttgacggagacgagatg
aatgctcactttccccagagtgagctctgcagagctgaagcttacggcattgccagcaca
gacttccagtacctggttccaaaggatgggtcacctttggccggtctcatccaggatcac
ctggtggcaggtgtgtctctcactgtgcggggacagttcttcaacagggatgactacttc
aacttactgcagtcagcactgacaaacactcgaggcaaactgaaacttcttcccccctcc
atcatcaagccatgcaaactttggtctggcaagcaggtggtctctacattgttgctgaac
atcatccccaaagacaaacctcccctcagcatggagggcaaagccaagatcaaagagaag
agttggatccagagacacatggataaagacaaaccgtacctgacgctcgcagaggcacag
agaatgacggaagatctaggggagagcactgtcattgtggatcacggagagttgttgcaa
ggaatattggacaaggcacaatgtggaccgtcttcttttggtcttgtgcactgtgtctat
gagctgtatgggggagaggtggcggggatgctgctgacatgcatgggacgtctcttcacc
gccttcctcaagctgagagggttcactctgggcatcgaggacatcttggtgcaagacgag
gcagaagtgagacgcaaaaagaagatcaccaaagctcccaaagaaggccacaaggcggcg
ctggaggcattcggaatgacgggggaagactgcagtgatgctgagctgctgcgtctgctt
aaagaagcgcagtttggaaaagacgacatggccctgaaacagctggacaacagtgcgaag
aaaatcaccaatgacgtgtcagagaagatttcattgaccatcataggcaagcacctgttc
aagagtttccctgacaacaacctgcagctgatggtgcagtctggcgccaagggaggatct
gtgaactgcatccagatctcaagcatgctgggacagattgaactggagggtcgtcggccc
ccgctgatgaaaagcggccgatccctcccctcgtacctgccctacgacctctcgctcaag
gctggcggctttgtgacaggtcgcttcttgacgggcatccgacctcaggagtacttcttc
cattgcatggctggcagagagggtctgatcgacacagcagtgaaaacaagtcgcagtggg
tacctgcagcgctgcctcgtcaaacacctggaggggctgacagtcaactatgacatgacg
gtcagagacagcgattccagcgtcatacagttcttgtacggtgaggacggtctggaggtg
tgcaagacgccgttccttgaggagaagcagttccccttcctgctgaagaaccaggacgtc
ttggacaatgatgctgaccagtccaaggggaacaagcgtgtggagaaacacaaaaagaaa
gttaacaaatggcagaagaaacacacgaaggggaggacgagagcctcaggattcctaaac
ttctgctcagcacagcatcaggagcgacagcctggtgacacaaagccatcggaaaacacc
ggaaggtcggccagaagttcagcgcttgaagttgagtggagaggcttaggcccagaccgc
aaacacaagttgacaaagaagcaccggccatgcccagaccctgtgatatccaaatattgg
ccacagctgcacacaggcgtcatctcagaaaacatgcaggagtcagtcaaactcatacag
caacagctcttagaggtgggagagaactcgaacgagagaacgaaggaggagagtgtgaca
aagtgtaaagctctgccaagactggtacacaacaaggtgatgaagtccttagccgagcct
ggggaggctgtaggactgctgtgtgctcagtccatcggagaaccctccactcagatgaca
ctcaacactttccattttgcgggtcgtggagagatgaacgttacgctgggtattcctcgt
ctgcgagaagttctgatgactgctagctccaacatcctgactccgtccatggagattccg
atccatgacactccgcaggcacaagcaggggcggagagcctgcagaaaatactgagtcgt
gtttacctcagtgatgtgttacaagaaatgcaaatctatgactacctccactcttcatct
ccttcagcatccactaaagtggacagaaagcgactctatcgcattcatttcacacttctg
cccaagaagtgctacagtgacaaactgaagatgaaacctaaggagatcgtcagacacatt
gagaaagaactgattggccgcattgccaaagctgctcgtaaggtcatggacaagcgagaa
atggagaagccagaaaacctcatctccgagtccacattacgcagcatggagaggaaggag
gaggacgcaacggcagacccagctgctgatgacgccgactcggatgtggaaatgggtgac
ggtgattccacggcaaccaaggccctggcgcgacacaccgacaccaacgagtacgagggg
gaggaggaagagagagaggaggttggggacgccacacagcctgacgatatggaagaagac
gcaccagaagagggggaggaggccatgcaggaaggcgaagatgatgacgacaaccatgat
gcacaacaagaagcacaggacattgaggctgtcaagtcccttggctgtgtgcacaactac
cagcgagacaaaaagggaaagtggtgtgaagtgattctccagtttaatgcagcccgcttc
ctggtggacatgaaatcggtggtggacagagaggcaggcaggctggtgctgcaacaggtg
aaaggcatcaagcgctgcatgctgctcaaacagcctgacaggtacactggacagtccagg
ctacacctggtcgctgaggggatcaatttacaggagatgatgaagtacagtcacatactg
gatctcaactcgctgtacacaaacagcatccatgacatccagaacacgtacggtattgag
gctgccaacagagccattgtcaaggaagtgcaaaatgtgttcaagccttacgagatttcg
gtgaaccctcgtcacttgtccctcctggccgactacatgacgtgcgagggatcctacaag
ggtttcaaccgtctggccatgtcctccaatccctctccgttgcagaagatcacctttgaa
acatccatgaactttctcgtcagcgcatgcatgaacgcacggccagaccaactacgatcg
ccatcagcgcgaattgtggcagggcaggttgtgtcgagtggaacggggtgttttgaaatt
gtgcaacctctgcaggtctga
DBGET
integrated database retrieval system
