Litorilituus sediminis: EMK97_04600
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Entry
EMK97_04600 CDS
T05852
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
lsd
Litorilituus sediminis
Pathway
lsd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EMK97_04600 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsd03400
]
EMK97_04600 (uvrC)
DNA repair and recombination proteins [BR:
lsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EMK97_04600 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH
HHH_3
HHH_2
GIY_YIG_domain
DUF4602
MciZ
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
QBG37709
UniProt:
A0A4P6PBK4
LinkDB
All DBs
Position
complement(1023933..1025780)
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AA seq
615 aa
AA seq
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MSERQPPQVAFDSEAFLASVTEQAGVYRMYDHQQVVIYVGKAKQLKKRLASYFRKDVGSV
KTKALVKQICAIDVTVTHTEGEALILENNYIKKYQPKYNILLRDDKTYPYLLITDHKHPK
LGLHRGGKKIKGEYFGPYPTVGAVWESLRLMQKLFPIRQCEDSYYRARSRPCLQHQLGRC
SAPCVDKISTDDYMEQVRLAKLFLRGKSSTVIDSLVKKMELASRELAFEQAAKFRDQIAT
LRKVQQQQHVSGVAAEMDVVGLYRFKSQACVHLLFIRNHKILGSKSFFPVVPSETTDSEI
LQAFISQHYLNHEPLQGNIPKEIVIGEEVSQAKELMALLSEQAEYDVKISSKSRSERAQY
LKLACTNAQTALVTRNSHKESMQARFAALNEVFELDNGISRIECFDISHTMGQQTIASNV
VFNEEGPLKTDYRRYNVHGITPGDDYAAMAFALNKRYGKMKSLDKLPDIVFIDGGKGQLA
KAEEFFNQLNLERTPLLVGVAKGESRKPGLETLILAGSHQLISLPATSPALHLVQHIRDE
SHRFAITGHRAKRQKVSKKSQLEQIEGIGAKKRQSLLKFLGGMQEVLQADVSQLEKVPGI
SKVLAQNIYDALHDK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atatcagaaaggcagccacctcaggttgcctttgacagtgaagcattccttgcttcagtc
actgagcaagctggtgtttaccgtatgtatgatcatcaacaagtggtgatctacgttggt
aaagctaagcagttgaaaaaacgtttagccagttattttcgaaaagatgtcggctcagta
aaaaccaaagccttagttaagcaaatatgcgctattgatgtcacggtaacccacacggaa
ggggaagcgctgatattagaaaataactatattaaaaaatatcagcccaaatacaatatc
cttttacgtgatgataaaacttatccttacttgttaatcacggatcataaacatcctaaa
cttggtttacaccgaggcggtaaaaaaataaaaggtgaatactttggcccttatcctacg
gttggtgccgtctgggaaagcttaaggttaatgcaaaagttatttcctattcggcaatgt
gaagatagctattatcgtgcacgctcccggccttgcttacagcatcaattaggtcgttgt
tcagcgccttgtgtagataaaatctctaccgatgactatatggaacaagttcgactggca
aagttatttctacgtggtaaaagctcgacggtaatagactctttagttaaaaaaatggag
ttggcaagtcgtgagctagcatttgaacaagccgctaagtttagagatcaaatcgcgaca
ttacgcaaagtacagcagcagcaacatgttagtggtgttgctgctgaaatggatgttgtc
ggcttatatcgctttaaatctcaagcctgcgtgcatttactctttattcgtaatcataaa
attctcggtagtaagagcttttttcctgttgtgcccagtgaaaccactgacagtgaaata
ctgcaagcctttataagtcaacattatttaaatcatgagccgctacaaggtaatattccg
aaagagattgttattggtgaagaagtatcgcaggctaaagagctaatggcactattgtca
gagcaagcagagtacgatgttaaaatatcatctaaaagtcgcagtgagcgcgcgcaatat
ttaaagttggcctgtactaatgcgcaaaccgctttagttactcgtaatagccataaagag
tcgatgcaggcacgatttgccgctttaaatgaagtatttgagctagataacggtatatca
cgtattgaatgctttgatatcagtcatactatggggcaacaaaccatagcatctaatgtt
gtctttaatgaagaagggccgttaaaaacagactatcgccgttataatgtgcatggcatt
accccaggtgatgattatgctgccatggcatttgctttaaataagcgctacggcaaaatg
aaatctttagataaattgccagatattgtttttattgatggcggtaaagggcaattagct
aaagctgaagagttttttaaccagttaaaccttgagagaacacctttgcttgttggtgtt
gccaaaggggagtcgagaaaacctggcttagaaaccttgatattagcaggcagccatcaa
ttgatttccttaccggcaacgtcacctgcgctgcatttggtacaacatattcgagacgag
tctcatcgttttgccattaccggacatagagctaaacggcaaaaagtcagtaaaaaatca
caacttgaacaaattgaaggtataggcgcgaaaaaaaggcaaagcttactgaagttctta
ggtggtatgcaggaagtgttacaagctgatgtcagtcaattagaaaaggtgcctggcatt
agcaaagtcttagcgcaaaatatttatgatgcattgcatgacaagtga
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