Litorilituus sediminis: EMK97_10990
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Entry
EMK97_10990 CDS
T05852
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lsd
Litorilituus sediminis
Pathway
lsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMK97_10990 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsd03019
]
EMK97_10990 (recQ)
03400 DNA repair and recombination proteins [BR:
lsd03400
]
EMK97_10990 (recQ)
Enzymes [BR:
lsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EMK97_10990 (recQ)
Messenger RNA biogenesis [BR:
lsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EMK97_10990 (recQ)
DNA repair and recombination proteins [BR:
lsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EMK97_10990 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DNA_pol3_theta
Motif
Other DBs
NCBI-ProteinID:
QBG37801
UniProt:
A0A4P6P820
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All DBs
Position
complement(2458986..2460794)
Genome browser
AA seq
602 aa
AA seq
DB search
MTENNSADTQAQLLETLKHHFGYQSFRTGQFEIISQLLQGRDSLVLMPTGGGKSLCYQLP
AVLLPGVTVVVSPLIALMKDQVDGLTRQAIPAAFINSTLEQSEITDIFSRMAKGEIKLLY
VAPERLTNYYFLQNLSELPLSLFAIDEAHCISQWGHDFRPAYTKLACLKEHFPYVPVMAL
TATADVTTRKDILNQLALRDPYIHLDSFDRANIRFTLAQKYHGEKQLLGYIGKHKEDSGI
IYCNSRWQVEKLAKFLASSGVNCAAYHAGLENDIRSLVQEGFTKDNIQVVVATVAFGLGI
NKPNVRYVIHYEPPRTLESYYQEIGRAGRDGLPAEALFLVDDKDIERIKKRIADGDNPQR
VNVELQRFAAMSAFVDAQTCRRQVVLNYFAEFTKKGCGNCDICLDPPSQFDATVEAQKVL
SCVYRINQQGDINHVIAVLRGEETAKVKQLDHHNVSTFGLGKGKTPGYWYAIIGQLIHLG
YLQQDIEQQSSLCLTEASRAVLKATEPLMLASPRLQKASYWQQKAPQKGYDRTLFVKLRE
LRKTIADAEDIAPFIVFNDATLSELARVKPQTEAQMLRVSGIGDIKLARYGQPFLSLIKE
HQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atcactgaaaataatagcgctgatacgcaagcgcagctattagaaacacttaaacatcac
tttggttatcagagctttcgtactgggcaatttgagatcatctcgcaacttttacaaggg
cgtgactcgttagttttaatgccaaccggtggtggtaaatcattatgctaccaattgcct
gctgtgttattgcctggggttactgtggtggtatcgccgttaattgccttgatgaaagat
caggtagacgggttaacacgacaagctattccagcggcatttattaattcgactctagag
cagtctgaaattactgatattttttcccgtatggctaagggtgaaattaaactactttat
gtagcgcctgagcggctaacgaattattactttttgcaaaatctgtctgagttaccttta
agcttatttgccattgatgaagcgcattgtatttcgcagtggggacatgactttaggccc
gcctatactaagcttgcctgcttaaaagagcattttccttatgtgccagttatggcatta
acagcaacagctgatgtgaccacgcgcaaagatattttaaatcaattagccttgcgtgac
ccttatattcatttagacagttttgatcgcgctaatatacgttttaccttggcacaaaaa
taccatggtgaaaagcagctgcttggctatattggtaaacataaagaagacagtggcatt
atttattgcaatagccgctggcaagtagagaagttagccaagtttctagcaagtagtggc
gttaactgtgctgcttatcatgctggattagaaaacgatatacgcagtttagtgcaagaa
ggttttaccaaagataatattcaagtggtggtggcgaccgttgcttttggtttaggaata
aataagcccaatgtccgctatgttattcattatgagccgccaagaacgctggagtcttac
tatcaggagataggccgagcagggcgtgatggcttacccgcagaagcgttgtttttggtg
gatgataaagatatagaacgtattaaaaaacggatagcagatggtgataacccgcaacgg
gtcaatgtagaactacagcgctttgctgccatgagcgcttttgttgacgcacaaacttgt
cgtcgtcaggtagtacttaactattttgccgaatttactaaaaaaggctgtggtaactgt
gatatttgtttagatccaccaagtcagtttgatgcgacagtagaggcgcaaaaagtgtta
tcttgtgtttatcgtattaatcagcaaggtgatattaatcatgtaattgcggtattacgc
ggtgaagaaacggcaaaagttaagcaactcgatcatcataatgtttctacttttggctta
ggtaagggaaaaactcccggttattggtatgccattattggtcagctgatacatttaggt
tatttgcagcaagatatagagcagcagtcgagtttgtgtttaacagaagcgtcgcgtgca
gtgttaaaagcgactgagccattaatgctggcgagtcctcgcttacaaaaagccagttat
tggcagcaaaaagcaccacaaaaaggctatgatcgtacgttatttgtcaaactaagagag
cttagaaaaaccattgccgatgctgaagacattgcaccctttattgtctttaatgacgcc
accttatctgaattggctcgagtaaaaccacagactgaagcgcagatgctcagagtaagc
ggtattggtgatattaaattagcccgttatggtcagccatttttatctttgattaaagaa
catcaataa
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