Lacrimispora sinapis: VIG27_17545
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Entry
VIG27_17545 CDS
T10884
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lsia Lacrimispora sinapis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsia03016
]
VIG27_17545 (mnmE)
Transfer RNA biogenesis [BR:
lsia03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VIG27_17545 (mnmE)
Prokaryotic type
Methyltransferases
VIG27_17545 (mnmE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
Ras
Gtr1_RagA
Arf
ABC_tran
MMR_HSR1_Xtn
Roc
FliM
AAA_29
Motif
Other DBs
NCBI-ProteinID:
XIJ21278
LinkDB
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Position
complement(3736844..3738223)
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AA seq
459 aa
AA seq
DB search
MKLNTIAAIATAMSSSGIGIVRISGEESFQIIDRIFKGKGNADKKLSKEPSHTIHYGYIC
DGEEVVDEVLVLIMKGPRSYTAEDTVEIDCHGGVLVTKKILETVLKYGARPAEPGEFTKR
AFLNGRVDLSQAEAVIDVINAKNEYALKSSVSQLEGAVSKRIKKMRETIIYHIAFIESAL
DDPEHISLDGYEETLLETLTPLKKELEGLIRSADNGRVLSEGIETVILGKPNAGKSSLLN
VLVGEERAIVTDIAGTTRDTLREQIRLEELSLNIIDTAGIRDTKDVVEKIGVEKAKAAAQ
RADLILYVVDGSCPLNENDEEIFSVIKDKKAIVLLNKMDLNSVVTKALLKERTGHPVISI
SAKERTGIKDLEQEIKSMFYEGKLDFNDEVYITNVRHKNALSEALKSLTMVEQSVLNGMP
EDFYSIDLMDAYEQLGTILGESVEDDLVNEIFSKFCMGK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaatacaatagcggctatcgctacagcgatgtcaagttccgggatcggaatc
gtgagaatcagcggcgaggagtcatttcagattatagatagaatatttaaaggaaaagga
aatgcggataaaaagctttcaaaggagccatcccataccatccattacggctatatctgt
gatggggaggaagtggtggatgaggttttggttttgattatgaaggggccgagaagctat
accgcggaagatacggttgagatcgactgtcacggcggagtcctggtgacgaaaaagatt
ctggaaacggtgttaaagtatggtgccaggccggcggagccaggtgaattcacgaagaga
gcctttttaaacggcagagtggatttatctcaggcagaggccgtcattgatgtgatcaac
gccaaaaatgagtatgccctgaagtcttccgtcagccagctggagggggccgtttccaag
cgtattaagaaaatgagagaaacaatcatttaccatattgcgtttattgaatcggcactt
gacgatccggaacacatttctctggatgggtatgaggaaacccttcttgagactcttacg
ccgttaaaaaaggaactggaggggctgatccggtctgcagataacggaagagtcctttca
gaaggaatcgaaaccgttatattggggaagcccaatgcaggaaaatcgtctcttttgaat
gttctggtgggagaggagcgtgccattgtcaccgatattgcaggaaccaccagagacacg
ttaagggagcagatccgtcttgaggaattgagtcttaacatcattgatacggcgggaatc
cgtgatacaaaagatgtggtggaaaaaatcggagtggaaaaggcgaaagccgcggcccaa
cgggcagacttaatcctatacgtggtggatggttcctgtcctcttaatgaaaacgatgaa
gagattttttcagttattaaagacaaaaaggcaattgttcttttaaataaaatggactta
aattccgtggtaacaaaagctctgctgaaggagcggaccggtcatccggtgatctctatt
tccgcaaaggaacggaccgggatcaaggatctggagcaggagataaaatccatgttttat
gaaggtaaactggattttaatgatgaggtttacattaccaatgtaaggcataaaaatgca
ctttcagaagcattgaaaagtcttaccatggtggagcagagtgttctgaatggaatgcca
gaggatttctattccattgatttaatggatgcgtatgagcagctgggaaccattctcggt
gagtcggtggaagatgatctggtcaatgaaatattcagtaaattctgtatgggaaaatag
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