Leptidea sinapis (Wood White): 126964915
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Entry
126964915 CDS
T09272
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126964915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126964915
03016 Transfer RNA biogenesis [BR:
lsin03016
]
126964915
Enzymes [BR:
lsin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
126964915
Messenger RNA biogenesis [BR:
lsin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
126964915
Transfer RNA biogenesis [BR:
lsin03016
]
Prokaryotic type
tRNA degradation factors
126964915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
126964915
NCBI-ProteinID:
XP_050664190
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Position
6:4445605..4473906
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AA seq
748 aa
AA seq
DB search
MLVNHRLLLTRVRCKCRHYRKYLSSKANLAEIEVPFSNGTKLKLTSGRYARFADGACVAT
LGNTSVLSTVVSKAKQSSSNFLPLVVDYRQKAAAAGRIPTNFLRKELGPTDREVLTSRVI
DRSLRPLFPYNYNFDTQIVCNMLAVDGTNLPETVAINAASTALALSDVPWNGPIGAVRLG
HIDNEIIVNPTRRDLEESTLNLIVAAASGNLVVMLEGSAKDILQQDLLKAIKLGTKEAQN
IVRSIEKLQKDYGKMKREYETQTALEQSIVDSVQTLSSMKIREILSDHNHDKLSRDNAIS
ELRQTVMNQLRETEADLNQLQDCFNTNLRQIFRQLIFETDTRCDGRHLDELRKINCEVSL
YEPLHGSALFQRGQTQVLCTVAFDSPESALKMDPLTMITSGIKEKNFFLHYEFPSYATGE
VGRSGPAGRREVGHGALAERGLMPVVPQQPFTVRLTAEVLESNGSSSMASVCGGSLALLD
AGVPLSAPAAGVAIGLVSTPDERGHVADYRILTDLLGIEDYMGDMDFKVAGTKKGITALQ
ADIKIPGLPLRVVMESVQKACDAKSKIIDIMNQCIDKPRQDRKESMPVLEEMEVEPHKRA
KLLGVGGTNLKRLYLETGVQISPIDENKYAVFAPSECAMSEARTRLARWLSAESVPQLEF
GAIYTAKVVEVRDNGVLVTLYPGMSPALLHNTQLDHRKILHPSALGLEVGSEIQVKYFGR
DPVSGQARLSRKVITSPPPPHVRKLDKS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcaatcaccgactattactaactagagttcgatgtaaatgtaggcattacaga
aaatatttatcttctaaagcaaatctagcggaaatagaagtacctttttccaatgggacc
aagttgaagttgacttctggccgttatgcccggtttgctgatggtgcatgtgtagctacc
ctaggcaatacaagtgttctctcaaccgttgtgtccaaagctaaacagagcagtagcaac
ttcttgcctctagttgttgactacagacagaaagctgctgcagctggtagaatcccaacc
aattttctaagaaaagaactaggtcccactgacagagaagtattaacatcaagggttata
gataggtctctgagacctctgttcccatataactacaattttgacacacaaatagtgtgc
aatatgcttgcagtagatggtacaaatcttcccgagactgttgctattaatgcagcaagt
acagccctggccttatccgatgtgccatggaatggacccattggtgctgtgagattaggt
cacatagacaatgagatcattgtgaacccaacccgtagagacttggaggaatccacactg
aatctaatagtggccgctgccagtggaaacctagttgttatgttagaaggtagcgctaaa
gatattctgcaacaggatctgttgaaggccatcaaattaggtactaaagaagcacaaaat
attgtgcggagtattgaaaaattacaaaaagattatggaaagatgaagagagaatatgag
acgcagactgccctggaacaaagcatcgttgattctgttcaaacattgtcttctatgaaa
attagagaaatattaagtgaccacaatcacgacaaactatctcgcgacaacgcgatctca
gaactacgtcagacagtgatgaatcagctgagagaaaccgaggcagatctcaaccaattg
caagactgctttaacaccaacctccggcagatcttcaggcagctgatatttgagacggac
actcggtgtgatggcagacatttagatgaactaaggaaaattaactgtgaggtgtctctg
tacgagccattacatggcagtgcgctgtttcaacgtggacaaacccaggtgctgtgtact
gtagcatttgattcacccgaaagcgcgctcaaaatggaccctctcactatgatcacgagt
ggtataaaggagaagaatttcttcctacactacgaatttccttcttatgcgaccggcgaa
gtgggccgcagtggccccgcgggacggcgggaagtggggcacggggcccttgctgaacgg
ggcctcatgcctgtggtgccccagcagccattcaccgtgagactaactgctgaagtactg
gagtctaatggttcgtcgtcgatggcgtctgtgtgtggcggctcgctggctctgctggat
gccggagtaccgctaagcgcacctgccgccggcgtcgccatcggcctggtgtccacgcca
gacgagcgcggtcacgtcgccgactacaggatactgaccgatttgttaggtattgaagat
tacatgggcgatatggacttcaaagtggctggaactaagaaaggcataaccgccttacag
gctgatattaagataccaggtctccctctcagggtagtgatggagtctgtacagaaagcc
tgcgacgctaaaagcaaaattattgatattatgaaccagtgcattgataaacccagacag
gaccgcaaggagagcatgccagtgctagaggagatggaggtggaaccacacaagcgagcc
aagcttttgggtgtgggcggcaccaacctcaagagactgtatctggagacgggcgtgcag
atcagtccaatagatgaaaacaagtacgccgtgtttgcgccgtcggagtgcgcaatgagc
gaagcacgcactcggcttgctcgctggctcagtgctgagtcggtgccgcaactggagttt
ggtgccatctataccgccaaggtggtggaagtacgcgacaacggcgtgttggtgacgctg
taccctggcatgtcgcccgccctgttacacaacactcagctcgatcacagaaagatactg
catccgtccgcgttaggtctggaggtgggttcagagatccaggtgaaatacttcggacga
gaccctgtctcggggcaggcgcggctctccagaaaagtgatcacttctccaccgccacct
catgtaaggaaacttgataagagttag
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