Leptidea sinapis (Wood White): 126970556
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Entry
126970556 CDS
T09272
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
126970556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsin03400
]
126970556
DNA repair and recombination proteins [BR:
lsin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
126970556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
126970556
NCBI-ProteinID:
XP_050672484
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Position
21:complement(13378038..13391308)
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AA seq
1143 aa
AA seq
DB search
MRSTRKRTTKPVYKDENENNSDVGDFSDSGSDAVISAPPSSEDEEESFISAGSSDEFKSK
PKRKPQSRPIKKQNKSFTKTIINKINKQCQQYSENEEVQDKPEFTIKDLTDADKLLPSLN
LSESDSSDDEETMPKKSQKKVFNKPAFMETTEETVKDECPKVEYRDVWSNNDKPSSSEEI
AKKAFLELEQHKNKVEEAKTSIENYKLRNDNKESNVTDLLALGEVVSPTTLKLQNRADSD
SEMEDWEEVDEKKSSIPQHGLQLVVGIPGAVCRKSKKIDVEMMMKRKLNRAKKEQQVYMH
KVHVLIWLGHGNYVSKVLNDQSILSTALSLVASQDCYPGERVDMKYVEQITSWYHNKITL
KQDKHENKFRPKAPPLTVILPEQIKKKVFTTKKYIVFVFVSMLRALGLQCRVMFNFITVP
LRPPSSELCSLSTKVKEDGGEEKSKQSNKNKTKEITKDIDDKNIAQLDGNDDLGSERTRR
TRSAPAKQAQKHLNGNKSENEDVSPPKRPKKNVNPDIDNKSDFNIQVKNQRPSRMCRKKL
GPTEEPQKQQKSLSLKNKIDNEQKENSEQKIQNVRNKQVSKLRKSTANSAEIPKIVITNE
NNVSSKYFKEDKKTTEPQIRKRRTRSTDSSTSTEIKQGQGKRTTRVKPTTSEFFDTVNNK
QSPVKMKRPMKRIKSEDSLRISDRDIKKSPSNSKTDVTTDLIHIIKKSVREAKEKSKKGI
VKGKVTKESDDDSDYLPVESPKSRKSNSDDDFKPSKISPKPGPSRKIDRRVLSTDDNDLP
LNKIDVWCEVFVEELEEWIAVDVIRGKVHSTNEIYNKATHPVNYVLGWDNNNYLKDLTRR
YVPHWNTVTRKQRVDMSWWDVAIRPWLGPKTARDREEDERLDRMQLEAPLPKSIAEYKNH
PLYALKRHLLKFEALYPADAAVLGFVRGEPVYGRECVHVCRSRDTWMKEAKVVRLGEKPY
KIVKARAKWDKLSNKMITDKPLEVFGPWQVQDYEPPTAENGVVPRNAYGNVELFKDCMLP
KGTVHIKLPGLNRIAKKLSIDCAPAMTGFDFNGGYTHPVFEGFVVCKEYEEVITEAWIKD
QEELERKEREKIDARVYGNWKRLIKGLFIRERLRAKYGFEEPSTSNKEKKPRGPRFVATK
KHK
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcaaccagaaaaagaactaccaagccagtctataaagatgaaaatgagaataat
tcggatgtaggcgatttcagtgactccggttctgatgctgtgatatctgcaccaccaagt
tctgaagacgaagaggaatcctttatttctgcaggatccagcgacgagtttaaatcaaaa
cccaaacgtaaacctcaaagccggcctattaaaaaacaaaataagtccttcactaaaact
attattaacaaaataaacaaacaatgccagcaatatagtgagaatgaagaagttcaagat
aaacctgaatttactataaaagacctgactgacgctgataaattgttaccaagtcttaac
ctttcagaaagtgatagcagtgatgatgaagaaactatgccaaaaaaatcacaaaaaaaa
gtttttaacaaaccagcttttatggaaaccactgaggaaactgtgaaggatgaatgtcca
aaggttgagtatagagatgtttggtctaataatgacaaaccttctagcagtgaagagata
gcaaaaaaagcatttttagagctagaacaacataaaaataaagttgaagaggctaagaca
tcaattgaaaattacaaattaagaaatgacaataaagaatctaatgttactgatttactt
gcattaggagaagtagtatctcctactacacttaaactgcaaaatagagctgatagtgat
tctgaaatggaagactgggaagaagttgatgaaaagaaatcaagtatacctcaacatgga
ttacagttggttgtaggtattccgggagcagtttgtagaaaaagcaaaaaaattgatgta
gaaatgatgatgaaaaggaaactcaaccgggctaaaaaagaacaacaagtttacatgcac
aaagttcatgttttgatttggcttggtcatggtaattatgttagcaaggttttgaatgac
cagtccattctatcgactgctttgtccctagtagcttctcaagactgctatcctggtgaa
agagttgacatgaaatatgtggaacaaataacttcatggtatcataataaaatcacattg
aaacaagataaacatgagaataaatttcgcccaaaagcgccccccttaactgttatttta
cctgaacaaattaaaaagaaagtatttactacaaaaaaatacatagtttttgttttcgtg
tcaatgttaagagctctaggattacaatgccgtgttatgtttaattttataactgtgcct
ctaaggccaccttcttctgagctttgttcattatctacaaaagttaaagaagatggagga
gaagaaaagtctaaacaaagtaataaaaataaaactaaagaaataacgaaggacattgat
gataaaaatattgctcagctagatggtaatgatgatcttggatcagaaagaactagaaga
acaagaagtgcgccagcaaaacaagctcagaagcaccttaatggtaacaaaagtgaaaat
gaggatgtatctccacctaaaaggcctaaaaagaatgttaatcctgatattgacaataaa
tctgattttaacattcaagtgaaaaaccagaggccaagcagaatgtgtaggaagaaactt
ggtcctactgaagaacctcaaaaacaacaaaagtcgttatccttaaaaaataagatagat
aatgaacaaaaagaaaatagcgaacaaaaaattcaaaatgtcagaaataagcaagtttca
aaattaagaaaaagcactgcaaattctgcagaaattccaaaaattgtaattacaaacgaa
aataatgtttcaagcaaatattttaaagaagacaagaaaacaacggaaccgcaaattcgt
aaaagaagaacacgaagtaccgattcaagtacaagcacggaaataaaacaaggtcaaggt
aaaagaactacaagagtaaaaccaacaactagtgaattttttgatacagtaaacaataaa
cagagtcctgtgaagatgaaacgtccaatgaaaaggattaaatctgaagacagtctcaga
ataagcgatagagatataaaaaaatcaccatcaaattcaaaaactgatgtaactactgac
ttaattcatatcataaaaaaaagtgtgagagaagccaaagaaaaatcaaaaaaaggaatt
gttaaagggaaagttacgaaagaatcagatgatgatagtgattaccttccagtggagtca
ccaaaatcaagaaaatctaacagtgatgatgacttcaagccatccaaaattagccctaag
cctggcccaagtcgtaaaatagatcgacgggtgctatccacagatgataatgacctacct
ctaaataaaatagatgtttggtgtgaagtgtttgttgaagaactggaggaatggattgca
gttgatgtcattagaggaaaagttcatagcaccaatgaaatatataataaagccactcat
cctgttaactatgtgcttggatgggataacaataattacttgaaagatttaaccagaagg
tatgtcccacattggaatactgtaacaaggaagcaacgggtggatatgagctggtgggat
gtggctatcagaccgtggcttggacctaaaaccgcaagagacagagaggaagatgaacgc
ttggacagaatgcaacttgaagctccactccccaaaagtattgcagaatacaagaaccac
ccgctgtacgccctcaagcgccacctgctcaagtttgaagctctgtacccggcggacgcg
gccgtgcttggcttcgtgcgaggtgagcccgtgtacgggcgcgagtgtgtgcacgtgtgt
cgctccagggacacgtggatgaaggaggccaaggtcgtccgcttgggggaaaaaccgtac
aaaattgtgaaggcgagagctaagtgggataagctttcaaacaagatgataaccgataag
cctctggaagtgtttggaccgtggcaagtacaggactatgaaccacctacggctgaaaac
ggggtggttcctcggaatgcttatggaaatgtggaactgttcaaggactgtatgttacca
aagggaacagtacatattaaattgccaggattaaatcgaattgcgaagaaactcagcatt
gactgcgctcccgccatgaccggattcgatttcaatggcggctatacacacccggtgttt
gagggcttcgttgtgtgcaaggagtacgaggaagttatcacggaggcttggattaaagac
caagaagagctcgaaaggaaggaaagagagaaaatagatgccagagtttacggcaattgg
aaacgtctcattaaaggactgtttattcgtgaacggctgagggctaagtatggttttgaa
gaaccgagtacatcgaacaaggagaagaaaccaagagggccccggttcgtggcgactaag
aaacataaataa
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