Leptidea sinapis (Wood White): 126973075
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Entry
126973075 CDS
T09272
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsin04040
]
126973075
Ion channels [BR:
lsin04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
126973075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
PFF1_TM
SieB
Zip
Motif
Other DBs
NCBI-GeneID:
126973075
NCBI-ProteinID:
XP_050676144
LinkDB
All DBs
Position
28:complement(1403462..1438094)
Genome browser
AA seq
2088 aa
AA seq
DB search
MSEDLDSISEEEQSLFRPFTRESLAAIEARIAEEHAKQKELEKKRAEGETDLGRTKKKKE
VRYDDEDEDEGPQPDATLEQGLPLPVRMQGSFPVELASTPLEDIDPFYSNQTTFVVVSKG
RDIFRFSATDALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKVFPDDGSWGNLTDENWERFCQNETNWYGEEENYPLCGNSSGAGQCEPGYVCLQGYGPN
PNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGSWHVLFFVVIIFLGSFYLVNL
ILAIVAMSYDELQKKAEEEEQAEEEALREAEQKAAARADKQEAREAHAREQAAAAEAAAY
AEAHPAKSPSDFSCQSYELFVNQERGNQDDNTRERMSLRSDPFQDSVSTQPAHKPEPHHD
TARRQRKVSMVPHPERINKYGQLSYGPLREGSQASLSLPGSPFNLRRGSRGSHQMALRPN
GRNRYPPGADRKPLVLSTYLDAQEHLPYADDSNAVTPMSEENGAIIIPVYYANLGSRHSS
YTSHQSRLSYTSHGDLLGGKPQTKEARLRGRSASRNHSVTSQPHAYPLPRQDSSLVSRPL
REYEVSTTECTDEAGKVLKQSNDNPFIESSQQPNVVDMRDVMVLNEIIEQAGRQSRASEQ
NVSVYYFSTAEDDDEGPTVKERLLECLMKGIDLFCVWDCCWLWLEFQKYVALLVFDPFVE
LFITLCIVVNTLFMALDHHDMDKDMERALKSGNYFFTATFGIEAMLKLIAMSPKYYFQEG
WNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALG
NLTFVLCIIIFIFAVMGMQLFGKNYVDYVDRFPGGELPRWNFTDFMHSFMIVFRVLCGEW
IESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSTPTADQDTNKIA
EAFNRISRFIDWVKKNVADFMKIVKNKLTNQIAIHAPGLKAALCGRCVSSERGDNELELG
NDLDDGVLYKDKKLKDQVEVAIGDGMEFTIPGDNKYKKGKMLMNNINAITDNHTDNRINC
DINHHGYPIQDDDTISQKSYGSHKIRSFKDESHKGSADTIDGEEKKDASKEELGLEEEMI
EEEEDGKSDGLGKIDIKVAADEDVVDLTPADCCPDPCYVRFPFLAGDDESPFWQGWGTLR
LKTFRLIENTYFETAVITMILLSSLALALEDVHLPHRPILQDILYYMDRIFTVIFFIEML
IKWLALGFQKYFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMS
RMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDMNHTTLSHEI
IPDRNACILENYTWENSPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSREVGRQPIRE
TNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKK
MGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDMIIMLFIGLNMLTMTLDHYQQSDTFSLVL
DYLNMIFIVIFSSECLLKIFALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPT
LLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFM
HVKDKGGLDDVYNFKTFVQSMILLFQMSTSAGWDGVLDGIINEEECDLPDNERGYPGNCG
SATIGITYLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDP
EGTQYIRYDQLSDFLDVLEPPLQIHKPNKYKIISMDIPICRGDMMFCVDILDALTKDFFA
RKGNPIEEPGDIVGRPGEVGYEPVSSTLWRQREEYCARLIQHAWRRHRRSQSPGAEEAGS
AGAASTAGSAGEATAVLLDAGGGAHRVVLQAGGAAPRPPDPAPPPAPV
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagacttggactcgatcagcgaggaagaacaaagtttgttccgacctttcact
agagagtcattagccgctatcgaagctcgcatcgctgaggagcatgccaaacaaaaagaa
cttgagaagaaaagagcagagggcgagaccgatttggggcggacgaaaaagaaaaaagaa
gtgcgttatgatgacgaggatgaagatgaaggtccccaaccggatgcgacgttggagcag
ggactcccgcttcctgtacggatgcaaggttctttccctgtggaacttgcctcgacacca
ctcgaagatattgaccctttttattccaaccaaaccactttcgtagtcgtcagcaagggt
agagatatcttcagattttcagcaaccgacgctttgtggatattggatccatttaatcct
ataagaagagttgctatatacatattagtacatccattgttctctctcttcattataact
acaatcctagtcaattgtatattaatgataatgccaacaacaccgactgttgaaagtact
gaagttatctttacgggaatctacacgtttgaatcggcggtgaaagtaatggccaggggt
ttcatactacagccattcacataccttagagatgcatggaattggcttgacttcgtagtt
atagctttagcttatgtgacgatgggcatagatctcggaaacttggccgctctcagaaca
ttcagagttctccgagcgttgaagactgtggccatcgtaccggggttgaagaccatcgtt
ggtgctgtgatagaatcggtgaaaaatctgcgcgatgtgataatattgacgatgttctct
ttatcagtttttgcgttgatgggcctgcaaatatacatgggtgtgttgacgcaaaaatgt
ataaaggttttcccggacgatggtagttggggtaaccttactgacgaaaactgggagaga
ttctgtcaaaacgaaacaaattggtatggtgaagaagaaaattatccattatgtggaaat
tcatcaggagcggggcaatgtgagccgggctatgtttgtttgcaaggctacggtccaaat
ccgaactacggttacacaagtttcgacacatttggatgggcattcctttcggctttccga
ttaatgacacaggattactgggaaaatctctaccaactggttttacgctcagctggctct
tggcacgtattattcttcgtggtgattatatttttgggatcattctatctcgtcaacctg
atattggccatcgtagccatgtcgtacgacgagttgcagaagaaagcggaagaggaagaa
caggcagaagaagaagctctaagggaagcagaacaaaaagcagcagctcgagcagacaag
caagaagccagagaagcccacgcgcgggaacaagcggctgctgctgaagcggccgcgtac
gccgaggcccacccggccaagtcacccagcgacttctcctgccagagctacgagctgttc
gtgaaccaggagcggggcaatcaggacgacaatacccgagaacgcatgtcccttcgtagc
gaccccttccaggactcggtgagcactcagccagcgcacaagccagaaccgcaccacgac
acggcacgacgccagaggaaggtcagcatggtcccacaccctgaacgcattaataaatac
ggacagttatcatatgggccactgcgggagggctcacaggcctctttatcgctgcccgga
tctcctttcaatttacgacgaggatcgcgtggttcacaccagatggctctgagaccgaat
ggaaggaatcgttatccgcctggtgctgacagaaagccgctcgttttatcgacatatttg
gacgcgcaggaacatttgccgtatgcagacgattcaaacgcagtcactccgatgtcagag
gaaaatggtgctatcattataccggtctactatgcaaatttaggttcaaggcattcttcg
tacacctcccaccagtcaagattgtcgtatacctcccacggggacctccttgggggtaag
ccgcagaccaaagaagccaggttgcggggacgctcagcatcgaggaaccacagcgtcacg
tcacagccccacgcctacccactgcccagacaagactcgtcgctggtatcacgaccatta
cgagaatatgaagttagtacaacggaatgtacggatgaagctggaaaagttctcaaacag
tctaatgacaacccatttatagaatcttcacagcaacctaacgtagtcgatatgagagat
gttatggtattaaatgaaataatcgaacaagcgggaagacagagtcgagctagcgaacaa
aatgtgtctgtatactacttctcaacagcggaagatgatgatgaaggacccacagttaaa
gagagacttctggaatgcctgatgaagggaatagatttgttttgtgtgtgggactgctgt
tggctctggttggagttccagaaatacgttgctttactggtgttcgacccatttgttgag
ctcttcatcacgctgtgtatcgttgtcaatactttattcatggctttggatcatcacgat
atggacaaagatatggagagagccttgaaaagtggcaattattttttcactgcaacgttt
ggtattgaagcaatgttaaagttgatagccatgagtccaaagtattattttcaagaagga
tggaacatatttgactttataattgtggccttatcattattagaattgggacttgaagga
gttcagggtttgtctgtattacgttcatttcgattgcttcgagtgttcaaattggcaaag
tcttggccgactcttaatttactcatatcgataatgggtcgaacaatgggtgctttgggc
aacctgaccttcgtattgtgcatcattattttcatatttgccgtgatgggtatgcaacta
ttcgggaaaaattatgtggactatgttgaccgatttcctggaggagagcttccacgatgg
aatttcactgatttcatgcacagttttatgattgtcttccgagttctgtgcggagaatgg
atagagagtatgtgggattgcatgcttgttggagacgtgtcctgtataccgttcttcttg
gctaccgttgtcattggtaaccttgtggtactcaatctcttcttagctctgttactgtcc
aactttggctcgtcgagtttatcaacaccaacagcagatcaagacacaaacaaaattgct
gaggccttcaacagaatatctcgattcatcgactgggttaaaaagaatgtcgccgatttt
atgaagattgtgaaaaacaaactgaccaatcagatagcaatacatgcgcccggcttaaag
gcggctttatgtggccgctgtgtctcttcagaacggggtgacaatgaacttgaactgggc
aacgatcttgatgatggagtgctctataaggataaaaaactcaaagatcaagtggaggta
gctatcggcgatggcatggagtttactataccaggtgacaataaatacaagaaaggaaaa
atgttaatgaacaacattaatgcaataacagacaatcacacggacaaccggattaattgt
gacataaaccaccacggatatccaattcaggacgatgatacaattagtcaaaagtcatat
ggtagtcataaaatacggtcatttaaagacgaaagccataaaggctcagctgatacaata
gatggagaagaaaagaaagatgcaagtaaagaagaattaggtttagaggaagaaatgatt
gaagaggaagaagacggaaaatcagatggtttgggaaagatagatattaaagtggctgct
gacgaagatgtagtagacctcacaccagcagactgttgcccagatccttgttatgtgcgt
ttcccctttctagcaggcgacgatgagtctccattctggcaaggctggggaacactaaga
ttaaaaacttttagattaattgaaaatacttactttgaaactgctgtgataactatgatt
ttactgagcagcctcgcattggcattggaagatgttcacttacctcatagaccaattctg
caagatatattatattacatggatcgtattttcacggttatattcttcattgagatgtta
atcaaatggcttgctcttggcttccagaagtatttcactaacgcttggtgctggctggac
tttataattgtgatggtatcgcttataaacttcgtcgcggcgctatgtggcgccggtggt
attcaagcgttcaaaacgatgcgaacactgcgagcccttcggccgctcagagcaatgagc
cgcatgcagggcatgagggtggtggtgaacgcgttggtgcaagcgatcccatcaatcttc
aacgtgttgctcgtatgtctcatattttggcttatttttgcaataatgggagttcagctt
tttgccggaaaatactttaagtgtgtcgacatgaaccatacaacattgagccacgaaatt
ataccggatagaaatgcatgtattttggaaaattacacgtgggagaattcccctatgaac
ttcgaccatgttggaaaagcgtatctatgcttatttcaagtagctacttttaaaggctgg
atacagattatgaacgatgctattgattctagagaagttgggcgacaaccgataagggaa
acgaatatatacatgtatttatacttcgtattctttataatatttggctcattcttcact
cttaatctattcatcggtgtgatcattgacaatttcaatgagcaaaaaaagaaagctggc
ggtagtcttgaaatgttcatgactgaagatcagaaaaagtattacaacgctatgaaaaag
atgggatctaaaaaaccattgaaagccatcccaagaccaaggtggcgacctcaagcgatc
gtgttcgagatagtgacagacaagaaatttgatatgatcattatgttatttatcggcttg
aacatgttgaccatgacgctcgatcattatcaacaatcagatacgttcagcttagtcctc
gactatcttaatatgatatttattgtgatattcagctcagagtgcctcttgaaaattttc
gctctacgctatcattacttcgtagaaccgtggaatctcttcgattttgttgttgtaatg
ttttcgattttaagtttggttctgagtgatattatagaaaaatattttgtctcaccgact
ttactaagagtcgtaagagtagcaaaagtaggtcgagtgcttcgacttgtaaaaggcgct
aagggtatcagaacgttactattcgcccttgcgatgtcactgccagctctattcaatatt
tgtttactattgttcttagtgatgttcatcttcgctatatttggaatgtctttcttcatg
cacgttaaagacaaagggggtttagatgacgtctacaattttaagacgttcgtgcagagc
atgattcttctatttcagatgtcgacgtcagctggttgggatggcgtattagatggaatt
attaatgaggaagaatgtgatttgccggacaatgagcgcggctatccaggaaactgtggc
tctgcaactatcggaatcacttatttgctgtcctacttggttatttctttcctcattgtt
atcaacatgtacatcgccgtcatcctcgaaaactattctcaggcgacagaagatgtgcaa
gaagggttaacggatgatgactacgacatgtactatgaaatctggcagcaattcgatcct
gagggcacccagtacatccgttacgatcagctatctgacttcctcgacgtactcgagcca
ccacttcagatccacaagcccaacaaatacaagatcatatctatggacataccgatctgt
cgcggcgacatgatgttctgtgtggacattctggacgccctcaccaaggatttcttcgcc
aggaagggaaaccccatcgaggagccgggggacatagtgggcaggccgggcgaggtcggg
tacgagccggtatcgtcgacgctgtggcggcagcgggaggagtactgcgcgcggctcatc
cagcacgcgtggcgacggcaccggcgctcgcagtcgccgggcgcggaggaggcgggcagc
gcgggcgccgcgtccaccgccggcagcgcgggcgaggccacggccgtgctgctggacgcg
ggggggggcgcccaccgcgtggtgctgcaggcggggggcgcggcgccccgcccccccgac
cccgcgccgccgcccgcgcccgtctga
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