Leptidea sinapis (Wood White): 126978083
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Entry
126978083 CDS
T09272
Name
(RefSeq) transient receptor potential protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
126978083
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsin04040
]
126978083
Ion channels [BR:
lsin04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126978083
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
PKD_channel
Ank_4
Ank_3
Ank_5
Ank_KRIT1
DUF6046
Motif
Other DBs
NCBI-GeneID:
126978083
NCBI-ProteinID:
XP_050682752
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All DBs
Position
47:4304488..4383826
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AA seq
1203 aa
AA seq
DB search
MKRPRRKRTRRIRIRFNMNDANIMNRGSREELLGSSQEAMRNSQPDLLSAFERPLTREEK
NFLLNADRGDYNTVKRLIEQYSSKPEVLDINCVDPLNRSALIAAIENENIELIKLLLDAG
IKVKDALLHAIKEEYVEAVEMLLQWEEEHHVSGEPYSWESVEPSSATFTTDITPLILAAH
RNHYEILKLLLDRGATLPVPHDVKCGCDECVKSSSEDSLRHSQARINSYRALSSPSLIAL
SSADPVLTAFELSWELNKLSRLETEFRVEYKALRQQVQEFATSLLDHTRTSQELEIMLNY
NPLDLNCWEPGERQTLGRLKLAIRYKQKMFVAHPNVQQLLGAIWYDGLPGFKRKTFVGQC
IQVAKLGAMFPIYCSIYMMAPDSEYGQFMRKPFVKFICHSSSYMLFLSLLSLASQRAEFL
VLEYSGISWLQELVEYWKAHERGSLPGLIEFCVIVYIASLIWGEIRSLWSGGLVEYISDL
WNIVDFITNMFYISWIILRFTSWYIVQRDYHSGKDPWYPRERWDSFDPMLLSEGAFAAGM
IFSFLKLVHIFSINPHLGPLQVSLGRMILDILKFFFVYMLVLFAFGCGLNQLMWYYSELE
KRKCYHFANSDIADFDNQERACSIWRRFANLFETSQSLFWASFGLVDLTTFELTGIKSFT
RFWALLTFGSYSVINIIVLLNMLIAMMSNSYQIISERSDTEWKFARSNLWMSYFEDGDTV
PPPFNIIPTPKHMKGWVNRICNDRDRGSIINKNREKARQQHDAVMRVLVRRYVTAEQRAR
DDIGVTEDDVMEIRQDISTLRFELIDILASNGMKTPRVNMNDTTISGKKGKVMERRILKD
FQIGIVEGIIKDVISKESKPKDVFSQIAKAMTRRGSAADGSKKRDWNAVVRTNTLRRDPI
GTTTRQSLRAHILDNVQARTIDPQKLLEYNPKLSDVTPTTRVAYAKFMRSKIKSDFSEGE
KQGTSEVTIENEASEAKKKFAAALKPKSPIPEGAESEHLKKNEIQVQAHIESKGGGSQAK
PEGPKTAKPPEDTSKPKDVPKPAVSPKPSEPPKQTDPPKPTDPKPTKEIPKTSTTAPPAE
AAKAEQKDHVIQIDEPESPTKNLYITKEEDSALQKPLTPTPSVHSKSEKSEQILSASKLE
ADHGASTSDKKHESEPKEEKKPKDPKPPKPKPGPSPAPAPAAPQMVTDKGKSKVTGKMVS
GWL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaccgaggaggaaaagaactcggcgtattcggataaggtttaatatgaatgat
gcgaacatcatgaaccgaggctcgagggaggagctcctcgggagttcccaggaggcgatg
cggaacagccagcctgacctcttgagtgccttcgagcgtccactcactagagaagaaaag
aattttcttctcaacgctgacaggggagattacaatactgttaagagattaatagagcaa
tattcatcgaagcccgaagtacttgacatcaactgcgtggatcccctgaaccggtcagca
ctcatcgcagcgattgagaacgaaaacatcgaactgataaaacttctgctagatgctggc
atcaaagttaaggatgcgttacttcatgccatcaaagaggaatatgtggaagcagttgag
atgctgctgcagtgggaggaggaacaccatgtttctggggaaccttatagctgggagtca
gtggagccatcttcagccacgttcacgacagacatcaccccgctgatcctggctgctcat
cggaaccactacgagatactcaagctgttgctggacagaggtgcgaccctgccggtgcct
cacgacgtcaaatgcggttgtgatgagtgtgtgaaatcgtcaagcgaggactctcttcga
cactcccaggctcggatcaactcttacagagccttgagctctccatcgctcatcgccctg
tcttccgccgatccagtacttaccgcatttgaactgtcttgggaactcaacaaactaagc
cgacttgaaactgaatttcgtgtagaatataaggcccttagacagcaagttcaagaattc
gccacatccctcctggaccacacgcgcacatcccaagagttggagatcatgctgaactat
aacccactcgacctgaactgctgggaacctggagagagacaaacactaggaagattgaaa
ctggcaattagatataagcagaaaatgtttgtggcacatccgaatgttcaacagcttctt
ggtgctatctggtacgatggacttccaggctttaaaagaaaaacattcgtgggacaatgt
attcaggtcgcgaaacttggcgctatgttcccgatatactgttcaatatacatgatggca
cctgattcagaatacggacaattcatgaggaaacctttcgtcaaattcatctgtcacagt
tcctcgtatatgttgtttctgtcactactatcactggcgtcgcagagagcggaattcctc
gttttagaatattctggcatatcatggcttcaggaattggtggagtattggaaggcacac
gagagaggatcactgcctggactcatagaattttgcgtcatcgtctacatagcaagttta
atatggggtgagatacgatcgttatggtctggcggactagtggagtacatcagtgatctt
tggaacattgtagacttcatcacaaatatgttctatatcagctggattatcttgcggttt
acttcgtggtacattgtacagcgtgattatcacagcggaaaagatccctggtaccctcga
gagcgttgggactccttcgatccgatgctgctctctgaaggtgctttcgcagccggcatg
atcttctccttcctcaagctggttcacatcttctccattaaccctcaccttggacccttg
caagtctctctcggcagaatgattttggatatcttgaagttcttctttgtgtatatgctg
gtgctgtttgcttttggttgtggtttgaaccaactgatgtggtattattccgagttggag
aaacgtaagtgctaccatttcgcgaacagcgacatagcagacttcgacaaccaagaaaga
gcttgcagcatttggagacgttttgccaacttattcgagacatcccaatccctgttctgg
gcgtcatttggccttgtggacttgacgacgttcgagctgactggcatcaagagctttact
agattctgggctctcctgaccttcggatcttactccgttatcaatatcatcgtgctgctc
aatatgctaatcgccatgatgtctaactcctaccaaatcatttcagaaagatcagacaca
gaatggaagttcgctcgcagcaacctctggatgtcttacttcgaagacggtgacacagtg
cctccaccatttaatatcataccaaccccaaaacacatgaagggctgggttaaccgtatt
tgcaacgaccgtgacagaggctctatcattaacaaaaacagagagaaagcacgtcagcaa
cacgacgccgtgatgcgtgtcctggttcgtcgatacgtgacagcagaacagcgtgctaga
gacgacatcggagtgacagaggatgatgtgatggagataagacaggacatatccacgtta
cgatttgagctgatcgatatcctggcgagcaatgggatgaagacgcccagagtcaatatg
aatgatacgacaatatctggcaagaaaggcaaagtgatggagaggaggatcctgaaggac
ttccagatcggaatagtggagggaataattaaggatgtgatttcgaaggagagcaaacca
aaggatgtattcagtcagatcgctaaggctatgacgagaagaggcagcgcggcggatggc
agcaagaaacgcgactggaatgcagttgttcgtaccaacaccctgcgtagggaccctata
ggaactaccaccagacaatcactgcgtgctcatatcttggacaacgtgcaggcaaggact
attgatcctcagaaactattagaatacaatcctaaactttctgatgtaacaccaacaaca
agagtagcatacgccaagtttatgagaagcaagattaagtcagatttcagtgagggagaa
aaacaaggaacgtccgaagttaccattgaaaatgaagcttccgaagctaaaaagaagttt
gctgcagccttgaagcctaaatctccgattccagaaggagcagagagtgaacatttgaaa
aaaaatgaaattcaagttcaagcgcacatcgaaagtaaaggaggaggctcgcaagccaag
cctgaaggaccgaaaacagcaaaaccacctgaagacacctcaaaaccaaaagacgtcccg
aaacccgcagtatcaccaaaaccatcagaaccgccaaaacaaacagatccacccaagcca
acagatcccaaaccaacgaaagaaataccaaaaacaagcacaactgcaccaccagcagaa
gctgcaaaagccgaacagaaggatcatgtcatacaaatagatgaacctgaatccccaact
aaaaatttatatattaccaaagaagaagattctgcgttacagaaacccttaacaccaaca
ccaagcgtccattctaaatctgaaaaatctgaacaaatactttccgcttcaaaattagaa
gctgatcatggtgcatcaacatctgacaaaaaacatgagtcagaaccaaaagaagaaaag
aagccaaaagaccccaaacctccaaaacctaagcctggtccaagtcctgcaccagcacca
gctgccccacaaatggttactgataaaggaaaatcaaaagttactggtaaaatggtatct
ggatggctttag
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