Leptidea sinapis (Wood White): 126979514
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Entry
126979514 CDS
T09272
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsin03036
]
126979514
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
126979514
Meiosis-specific proteins
Cohesin complex and associated proteins
126979514
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
AAA_13
DUF1664
XhlA
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126979514
NCBI-ProteinID:
XP_050684787
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Position
3:complement(12570649..12642975)
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AA seq
1221 aa
AA seq
DB search
MPAFLKYIDMENFKSYRGHHRIGPLRSFTAVVGPNGSGKSNFMDAVSFVMGEKTSLLRVK
RLSDLIHGASINKAVARSASVTASFILEDLTEKQFQRSVIGQSSDHRINGQSVPVSQYQS
ELEKLGINVKAKNFLVFQGAVESIAMKNPKERTALFEEISGSGVLKEQYEQCRMEVNRAD
EEAQFSYQKKKGVAAERKEAKMEKEEAEKYTRLKEELQQKKVELQLFHLYHNEKDIQNCE
EELQYKQNDVAKIEKKRQKAEEVLKEKKKEAGTAQRELAKIEQDIREVEAEISKKRPTFV
KAKDRVTHTQKKLESALKTLEQARKAHEAHQADIRKLEEELRVVEEEKALWEQSQQTQMG
TSTARSDVHLEEAQIREYEELKMEASRQAARYLQELDSVNREQKADQDRLDNEMRKKGEV
ENKHRQKGHERNEAMKRIEKLNEHIKSSEQALDEQRRLRAELQADVGSCRGKAAALQAAL
EDVAAQLGDARVDKHEEARRRKKQEIVESFKREIPGVYDRMINMCQPTHKRYNVAITKVL
GKYMEAIVVDTEKTARRCIQVLKERMLEPETFLPLDYIQAKPLKERLRDIKEPKNVKLLF
DVLRFEPAAIHRAVLFVTNNALVCETPEDASRVAYDLDRSKSSRYDALALDGTFYQKSGI
ISGGSLDLARKAKRWDEKHLSQLKAKKEKLTEELRESMKKSRKESELTTVDSQIRGLESR
LKYAISDRDTTQKQIKALDAELAELDRKIDMFGPQVEEIERTIRARDAKIQEVKENMNNV
EDVVFRAFCRDIGVANIRQYEERELRAQQERAKRRMEFEAQIDRIASNLEFERSRDTQKN
VTRWERTVQDGEDELEAHRQAEAKQRHDIDRELRRADGLKAERSAARAAADLADDKLAQA
RKELAAVQKDIASVQKQIGSIEARIESKKSERHNILRQCKIDDIQVPLLEGSLDETEESE
PSSMSTSQQFQRDSRIRVDYSDLPASLKELEEADDIKRRADKLQKNINSLQNTVDKIQAP
NMRAMQKLNEVREKVNATNEAFVAARKRAHKAKLAFEKVKKERHDKFQQCFEHVANEIDG
IYKALAMNQSAQAFLGPENPEEPYLDGINYNCVAPGKRFQPMSNLSGGEKTVAALALLFA
IHSYQPAPFFLLDEIDAALDNTNIGKVAAFIRSKKDSLQTIVISLKEEFYGCADALVGIC
SAPADCLVSDVITLSLEGHPD
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgtttttaaaatacatagatatggaaaactttaaatcctatcgcggccaccat
cgtattggacccctaagatcatttactgctgttgtcggaccaaatggctcaggtaaatct
aacttcatggatgctgtgagctttgtaatgggagagaaaacatcccttctccgtgtgaaa
cgtctgagtgatctcattcacggtgcctctatcaacaaggcagttgccagatctgcatca
gtgacagcatcatttattttagaagatttgacagaaaaacaatttcagagatctgttatt
ggtcagtcatcagatcataggataaatggtcaatcagtgcctgttagccaataccagtca
gagttggagaagttgggaataaatgtgaaagcgaagaactttctcgtgttccaaggggct
gttgaaagcattgccatgaagaatcccaaggagaggacagcactgtttgaagaaattagt
ggatctggggtactcaaagagcagtatgaacaatgccgtatggaggtaaaccgcgctgac
gaggaggcacagttctcataccagaagaaaaagggagttgcagcagagagaaaggaagcc
aagatggagaaggaagaagcggagaagtacaccagactcaaggaggagttgcaacaaaaa
aaagtggagcttcagctgttccacctttaccacaatgagaaagatatccagaactgcgag
gaggaactgcaatacaagcagaatgatgttgccaagattgagaaaaagcggcagaaagct
gaggaggtcttgaaagagaagaaaaaagaagcaggaactgctcaacgagagttggccaag
atagagcaggatattcgggaagtggaagcagagatatcgaagaagcgtcccacgtttgtg
aaggcgaaggatcgtgtcacgcacacgcagaagaagctggagagcgctttgaaaacactc
gagcaggcgcggaaggctcacgaggcgcatcaggcggacatcagaaagttggaggaagag
ctccgtgtcgtagaagaagagaaggcgctgtgggaacagagtcaacagacgcagatggga
acttccacagcacggtctgacgtgcacctcgaggaggcgcagatccgtgaatacgaagag
ctgaagatggaagcatccagacaggcggcgcgctacctgcaggaactggactcggtgaac
cgcgagcagaaggcggaccaggacagactcgacaacgagatgcggaagaagggggaagtg
gagaacaaacacaggcagaagggtcacgagcgtaacgaagcaatgaagcggattgagaag
ctgaacgagcacatcaagagttcggagcaggccctggatgagcagcgccgtctccgcgcc
gagctgcaggcggacgtggggtcgtgccgcggcaaggcggccgcgctgcaggccgcgctg
gaggacgtggcggcgcagctgggggacgcacgcgtcgacaaacacgaggaggcgcggcgc
cgcaagaagcaggagatcgtggagagcttcaagcgggagatacccggagtctacgaccgc
atgatcaacatgtgtcagccgacacacaagcggtacaacgtggccatcaccaaggtgctg
ggcaagtacatggaggccatcgtcgtggacacggagaagacggcgcgccgctgcatccag
gtgctgaaggagaggatgctggagccagagaccttcctgccgctcgactacatacaagcc
aagccgctcaaggagaggctgcgcgatatcaaggagccgaagaacgtgaaactgctgttc
gacgtgctgcggttcgagcccgcggccatccaccgcgccgtgctgttcgtgaccaacaac
gcgctcgtgtgcgagacgcccgaggacgcctcacgcgtggcctacgacctcgaccgcagc
aagagcagccgctacgacgcgttagctctggacggcacgttctaccagaagtcgggcatc
atctcgggcggctctctggacctggcgcgcaaggccaagcgctgggacgagaaacatctg
tcgcagctcaaggctaagaaggagaaactgacggaagagctccgcgagtcgatgaagaag
tctcgcaaggagtccgagctcaccaccgtggactctcagatccgtggcctggagtcccgc
ctcaagtacgccatctccgacagagacaccacgcaaaagcaaatcaaggcactggacgct
gagctcgcggagttggatcgcaagattgatatgtttgggccccaagtggaggagattgag
cgtacgattcgcgcgcgtgatgccaagatccaggaggtcaaggagaacatgaacaatgtg
gaggacgtggtgttccgcgccttctgccgcgacatcggcgtcgccaacatacggcagtac
gaggagcgtgagctgcgggcacaacaggagagggccaagcgccgcatggagttcgaggca
cagatcgatcgcatcgcctccaatctggagttcgagcgctctcgggacacgcagaagaac
gtgacgcggtgggagcgcacggtgcaggacggcgaggacgagctggaggcccaccgccag
gccgaggccaagcagcgccacgacatcgaccgcgagctgcgccgcgccgacgggctcaag
gccgagcgcagtgcggcgcgcgccgccgccgacctggccgacgacaagctggcgcaggcc
cgtaaagagctcgcggcggtgcagaaagacatcgcgagcgtccagaaacagatcggcagc
attgaggcacgcatcgagagcaagaagagtgaacgacacaacatcctgcgacagtgcaag
attgacgacattcaagtgccgctgctggagggtagcctggacgagacagaggagtctgag
ccctcctccatgtccacctcacagcagttccaacgggattccaggattcgagtggactac
agcgacctgcccgcgtccttgaaagagcttgaggaagcggacgacatcaaacgcagagcc
gacaaactgcagaagaacatcaactcgttgcagaacacggtggacaagatacaggcgcct
aatatgagggcgatgcagaagctgaacgaagtccgcgagaaggtgaacgcgaccaacgag
gcgttcgtggcagcgcgcaagagagcgcacaaggccaagctggccttcgagaaggttaag
aaggagcggcatgacaagttccagcagtgctttgagcacgtcgcgaatgagatcgatggc
atttacaaagcactggcgatgaaccagtcggcccaagcgttcctgggcccggagaacccc
gaggagccgtacttggacggcatcaactacaactgcgtggcgccgggcaagcggttccag
cccatgtccaacctgtccggcggcgagaagaccgtggccgcgctcgcgctgctcttcgcc
attcactcataccagccggcaccgttcttcctgctggacgagattgacgcggcgctcgac
aacacaaacattggcaaggtggccgccttcatccgcagcaagaaggactcgctgcagacc
atcgtcatctcgctcaaggaggagttctacggctgtgcggacgcgctcgtcggcatctgc
tccgcgccggcggactgcctggtgagtgacgtcatcacattgagcctggagggacacccc
gactag
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