Lepeophtheirus salmonis (salmon louse): 121114400
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Entry
121114400 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential-gamma protein-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsm04040
]
121114400
Ion channels [BR:
lsm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121114400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
121114400
NCBI-ProteinID:
XP_071742991
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Position
3:complement(3169933..3481863)
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AA seq
1165 aa
AA seq
DB search
MEEEERSQETVKNERSYLSENSGDPRSVRITEPIKKSSGGSHSAKSKVKSHSIHGMTEEE
AGARPHRDIGVLTFQEKKFLLAVERGDVASVRRILDARKLDIGLNGMLVNNDAGVLNINC
CDPLGRSALLMAIDNENLEMVELLLDNKVETKDALLHAINEEYVEAVEVLLEHEESIHKE
GELHSWEAVSPDTANFTPDITPLILASHRDNYEIIKILLDRGAVLPMPHDVRCGCEECMT
SRFEDSLRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFAEHEFKCEYLE
LRAQCQKFATALLDHTRSSYELEILLNHDPTGPVYQHGERMHLNRLKLAIKYRQKKFVAH
PNVQQLLASIWYEGLPGFRQMNIAFQLLEVCRIGLMFPVFALAYIICPCSNFSLKMRKPF
IKFICTSFSYFTFLFLLILASQRIEVVIAEWFHNERLKKYLSNDVTTKRGSMPTIVEWTI
LAWVAGLIWSEIKQLWDVGFNEYISDMWNVVDFVTNFLYVATIALRIVAYYKVQNEIKMG
SITAHLPREHWDTWDPMLISEGLFAAANIFSNLKLVYIFSVNPYLGPLQVSLSRMVMDIL
KFISLFVLVLFAFSCGANQLLWYYADLEKQRCYNEHENLAHTLEKEIPIANFSAFANKAL
QQDINHCLAWRRFANLWETCQTLFWAIFGLVDLDNFELTGIKEFTRFSGLLMFGSFSVIN
IIVLLNLLIAMMNHSYQLISVSSEKADIEWKFARSKLWISYFEEGGTCPPPFNIIPTPKS
IYYLIRWIYVKLCGRTNKIKKEHLKTRKVREATERDYRYQSIMRNLVRRYVTLEQRKAEN
EGVTEDDVNEIKNDISAFRFELIEIMRSSGMNTTSATGPSGAAGKKNRQKERRLMKGFNL
STSSSTPTGNALSHSTSTNPYPSRNGSQSKKISLNVPSSDISIDMSSTTGLKSPANSQNG
SSTYLSNNGKRSPISKFARFAKMATSKSIESQDGASTDEKSQRWASIMMNRASHKKFKSR
LLAANPSSSGEEVSLEAKIDELVLTPPELEGSRNKLTRSNQIEVASDEDDDCRTLLLPQK
DNSNEPSSTEANTTHIISPSMTTTALDNGSSNVTNGGGTTTSVIVERPISPSSLVKTQNG
STSNVKIPGGIKPTNISGVNNSGWL
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaggagaggtcacaagagactgtcaaaaatgagcggtcatacctgagtgaa
aactctggggatccacgctctgttcgaattactgagcccattaagaaatcctctggaggt
tcacattctgcaaagtctaaagtgaagagccacagtattcacggaatgacggaggaggag
gctggagcccgtccacatcgggacattggcgttctcacttttcaagaaaagaaatttcta
cttgccgtggaaagaggagatgtagccagtgttcgacggatactagatgccagaaaattg
gatattggattaaatgggatgttagtcaataatgatgcaggggtattgaatataaattgc
tgtgatcctttgggaagatctgctcttctcatggctattgataatgaaaacctggaaatg
gtggaacttctccttgataacaaggtcgaaacaaaggatgctctgttacatgccatcaac
gaagagtatgtggaagctgttgaagtccttctggagcatgaagaaagcattcacaaggaa
ggagagctacacagttgggaggctgtgtcgcccgatactgcaaacttcaccccagatata
actccactcattcttgcatctcatagagataactacgaaatcattaaaatcctcctggat
cgaggcgctgtcctgccaatgcctcatgatgtcagatgtggctgtgaagaatgtatgacg
tcgagattcgaggatagcttacgtcattcaagatctcgaataaatgcttaccgggcttta
gcttctccgtctcttattgctctttcatccaaagatcctatcctcacagcgtttgagctc
tcatgggaacttcggcggctctcttttgcggaacatgagtttaaatgtgaatatttggaa
ctaagagcacaatgccaaaaatttgcaaccgctcttttggatcatacccgtagctcttac
gaattggagatcctattgaatcacgatcccacaggacctgtgtatcaacatggagaacga
atgcaccttaaccgtctcaaattagctataaaatacagacaaaaaaaatttgtggctcat
ccaaacgttcaacaacttctggcttccatatggtacgagggtcttccagggtttcgtcaa
atgaacattgcctttcaattgttggaagtctgtcgaataggcctcatgtttcccgtcttt
gcattggcctacatcatttgtccatgttccaacttctcactcaaaatgagaaaaccattc
ataaaatttatttgtacttcattttcgtattttacatttctatttttgttaattttggca
tctcaaaggatcgaagtcgtgatagcagagtggtttcataatgaacgattgaaaaagtat
ttatctaacgatgtaaccacaaaaagaggttccatgcccaccattgtggaatggacgata
ctggcctgggtggcaggcttgatatggagtgaaataaagcaattatgggacgtgggattc
aatgaatacataagtgatatgtggaacgtagttgactttgtcaccaactttctctatgtc
gccacaattgcactgcgtatagttgcatattataaagttcaaaatgaaatcaaaatgggt
agtatcacggcacatttacctcgtgagcattgggatacttgggatcctatgcttatatca
gagggactatttgctgccgccaatattttttcaaatttaaaactagtctatattttttct
gtgaatccgtacctgggaccgttgcaagtctcgctgagtagaatggtgatggacattctt
aaattcatttcactcttcgtcctagtactttttgcattctcttgtggagcaaatcaatta
ctttggtattatgctgatttagagaagcaaaggtgctataatgagcatgaaaatctggct
cataccctcgaaaaagaaatccctatcgccaatttttctgcctttgcaaataaagccctt
cagcaagacatcaatcattgtctcgcatggagacgatttgccaacctttgggaaacgtgc
caaacattattttgggccatatttggtcttgtagatttggataattttgaattaactgga
attaaggagtttacgcgtttttcaggacttcttatgtttggatcattttccgtgattaat
attattgtactgctcaatcttctgattgcaatgatgaatcattcttatcagctcatttcc
gttagttcggaaaaagcggatattgaatggaaatttgcacggagtaagctatggatctct
tactttgaggagggaggtacttgtcctcctcctttcaacattattccaacaccgaaaagt
atctattacctcattcgttggatctatgtgaagctctgtgggcgaacaaataaaattaaa
aaagaacatttgaaaacgagaaaagttcgagaagccactgagagagactatcgctatcag
tccatcatgcgcaacttggttcgacgctacgtcactttagagcaacgaaaggccgagaat
gaaggagtgactgaggacgatgtgaatgaaatcaaaaatgacatctctgctttcagattt
gaattaattgagatcatgcgatcctcagggatgaacacaacttctgcaacgggtccttct
ggtgctgccggtaaaaagaatcgacaaaaggagcgtcgattgatgaagggattcaacctg
tccacaagttcatccacaccaacgggtaatgccttgagccattccacttccaccaatccc
tacccctctcgaaatggttcccaatccaaaaagatatccttaaatgttccttccagtgat
atatccatcgacatgtcgagtacaaccggacttaaatctccagccaactcccaaaatggt
tcttcaacttacctttcaaataacggaaaacgatctcccatttccaagtttgctcgattt
gccaaaatggcaacatccaagagtattgagtcacaagacggtgcttccacagatgaaaaa
tcccaacgatgggcgtccattatgatgaatagagcctcccataaaaagtttaaatctcga
ttattggcggcaaatccatcatccagcggtgaggaagtttctttagaagcaaaaattgat
gaacttgttcttacacctccagagctggaagggagtcgaaataaattgacgcgttcgaat
caaatagaggtcgcctccgacgaagacgatgactgtcgaactcttttacttccacaaaag
gacaatagcaatgagccttcatccacagaagccaatacgacacacattatttcaccatcg
atgacgaccacagctcttgataatggatcctcgaatgtaacaaatggaggaggaacgaca
acctctgttatagtggagagacctatttccccttcatcccttgttaaaactcaaaatggc
tcaacatctaatgttaagatccctggaggcatcaagcccacaaatatatctggagtcaac
aactctgggtggttataa
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