Lepeophtheirus salmonis (salmon louse): 121117165
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Entry
121117165 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: dynamin-like 120 kDa protein, mitochondrial
KO
K17079
optic atrophy protein 1 [EC:
3.6.5.5
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121117165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121117165
Enzymes [BR:
lsm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
121117165
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
121117165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OPA1_C
Dynamin_N
MMR_HSR1
FeoB_N
Roc
PADR1_Zn_ribbon
Sde182_NH-like
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
121117165
NCBI-ProteinID:
XP_040567431
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Position
5:13255044..13258256
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AA seq
921 aa
AA seq
DB search
MVSLVPKLFRNLLKIRYLIVGSTVGGXISLKYRYEEWKSNLPDIKWIESLREAAHGSEKM
NEMKTYLKGKIQDLDPILDRSKTQLSTLSSWFSKRLDHAIQQKEISQSTAVPFPDTKESS
PSSSMELNKLNLHIIDGSKIEENATGEDTLAEVNSQPYKDIRDKLNAARGELAKTQARYQ
KKLEMTERENAELKKQLLLGLAKNTSQKHSKKSLIDMYSDVLDELCGYDLSYKTGDNLPR
VVVIGDQSAGKTSVLEMIAQARIFPRGAGEMMTRAPVSVTLSEGPYHVARFKDSLREFDL
NNKKDLEDLRNEVENRMLKSIQCGETISRNPISMVVQGPGLQRMVLVDLPGIISTITTGM
DPLSKEQIKSLAFKYMSNPNAIILCIQDASVDAERSNVVDLISEMDPHGKRTILVLTKVD
LAEKNNINPERIEKILSGKLFPMKALGYFAVVTGKGSINETVQDIKHHEDEFFSHSKLFK
NNVSPAQTTTRNLSYAVSDCFWKMVLDTIEQQADAFKATRFNLETEWKNNFSRMRELDRD
ELFEKARGDILDEVVNLSLVPARHWEDMINRKLWKKIAPYVFENIYLPATQSRFSESSVI
TSQKSQTGIFNTTVDIRLKKWADTNLGNICVEVGWEVLSNQFIQLIEKHKNSTDHDKIFD
NLKSAVVKEAIKRHSWEVKATNALRLIQLNTLEDNTVHDKEQWDSSIQFLESALTEKLKF
VQNQLYEQLGPSNFEKLIQWKSSTEEHGVNSKILPELLKLLYKTQHKAQLSNEEISIVKR
NLMNDGVETNDETIKNVWNPLFRKNLLEKAIQRCSDCKKGFFAYSKGIRTEYDCSDVVLF
WRVQQMLKITANNLRQQVINRESKRFEREIKEVLDEFSNSYEQKNSLLSGRRVQLAEELK
RVRHIQEKLEDFIDSLNAGQE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccttagttccgaaattatttagaaatcttctcaaaattcgatatcttatcgtt
ggtagcacggtcggtgggngaatttctcttaaatatcgttacgaggagtggaagtccaac
ttacccgacataaaatggatagaaagtcttagagaggcggcccatgggagcgaaaagatg
aacgaaatgaaaacttacttgaaaggtaagatccaagatcttgatcccattttggatcga
agtaaaacacaattatcgactttatcttcatggttttctaagaggttggatcatgccatc
caacaaaaggagatttctcaatctacggcagtaccttttccggatacaaaagaatctagt
ccatcttcaagtatggaattaaataaattgaatcttcatataattgacggaagtaagata
gaagagaatgccacaggagaagatactttagctgaggtgaatagtcaaccttataaagat
attagggacaaattaaacgctgctcggggggaattggcgaaaactcaagctcgttatcaa
aagaaattggaaatgaccgagagagaaaatgcggaattaaaaaagcagttacttcttgga
ctggctaagaacacatcccaaaaacactccaagaaatcattaatagatatgtattccgat
gttttagatgaattgtgtggttatgatttgtcgtataaaacaggtgataatcttccaagg
gttgttgtgataggtgatcagtctgctggaaaaacctcagtccttgaaatgatagcacaa
gcaagaattttcccaagaggtgcaggtgaaatgatgacccgggctcccgtttctgttact
ttaagtgaaggcccctatcatgttgctcgatttaaagattctttgagagagtttgattta
aacaacaaaaaagatttagaagatctccgtaacgaagtggaaaaccgaatgttaaagtcc
atccagtgtggggaaactatttctagaaatccgatatcaatggttgttcaagggcctggg
cttcaaagaatggttcttgtagatcttcccggaattattagtacaattactactggtatg
gatcccctgtccaaggaacaaattaaatctttagccttcaagtatatgtctaatcccaac
gcaattattttgtgcattcaggatgcatcggtggacgcagaaagaagcaatgttgtagat
cttatatctgaaatggatccacatggaaaaagaacaattttggtcctcactaaagttgat
ctagccgaaaaaaataatattaatcccgagagaattgaaaaaattttgtctggaaaatta
tttccgatgaaagcgttgggatattttgcagtcgtaacaggaaaaggatctatcaacgaa
acagttcaagatatcaaacaccatgaagatgagtttttttcacattctaaactattcaaa
aacaacgttagtcctgctcagacgacaactcgtaacttaagttatgcagtatctgattgc
ttttggaagatggttctcgacacaatcgagcaacaagctgatgccttcaaggcaacaaga
tttaatcttgagacagagtggaaaaataatttctcacgtatgagagaattggatcgtgac
gagctatttgaaaaagcaagaggagatattttagatgaggttgttaacttatctttagtt
ccagcccgtcattgggaagacatgatcaatagaaaactttggaaaaaaattgctccttat
gtctttgaaaatatatatttaccagcgacacaatctcggttcagtgaaagctctgttata
acatcccaaaagagtcagacaggaattttcaataccactgtggatataagattgaaaaaa
tgggcagatacaaatctaggaaatatttgcgttgaagttggttgggaagtattgtcaaat
caatttattcaactaattgaaaagcacaagaatagtacagatcatgataaaatattcgat
aatcttaagtctgcagttgttaaggaagccattaaacgacatagttgggaagtaaaggct
acaaatgctctaagattgattcaactcaacacgttggaagataacacagttcacgataaa
gaacaatgggattcgtcaattcaatttcttgaatctgcactaaccgaaaaattgaaattt
gtgcaaaaccagctttatgaacaactaggaccctctaattttgaaaagctaatacaatgg
aaatcgtctactgaagaacacggcgtgaatagcaaaatcctacccgaactgctgaaactc
ctctataaaacacaacataaagcgcaattatccaatgaagaaatatccatagtaaaaaga
aacttgatgaatgatggtgtagaaacaaacgatgagacgattaaaaatgtttggaaccct
ttatttagaaaaaatcttcttgagaaagctatacaaagatgcagtgattgtaagaaagga
ttttttgcatatagtaagggtattaggactgagtatgattgtagtgacgttgttttgttc
tggagagttcaacaaatgctaaaaattactgctaataatctaaggcaacaggtaattaat
cgtgagtctaagagatttgaaagggagatcaaggaagtgttagatgaattttcgaatagt
tatgaacaaaagaactcactattgagtggaagaagagttcaattggcggaagagttaaaa
cgtgtgcgacatattcaagaaaaattggaagattttattgattcacttaatgccggacaa
gaataa
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