Lepeophtheirus salmonis (salmon louse): 121117730
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Entry
121117730 CDS
T08214
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04145
Phagosome
lsm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121117730
09142 Cell motility
04814 Motor proteins
121117730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121117730
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121117730
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
121117730
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
121117730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Dynein_IC2
Beta-prop_THOC3
WD40_Prp19
WDR55
Beta-prop_EML
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
HB_ELP1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MMTV_SAg
Beta-prop_WDR11_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
121117730
NCBI-ProteinID:
XP_040568146
LinkDB
All DBs
Position
5:complement(15207219..15211363)
Genome browser
AA seq
750 aa
AA seq
DB search
MVKREDEKQEKEKGEEEELERGRGRGRSKETKLKMVVGSNVEEIKKPLKTDSPSGSSSRL
SAMSDRKAELERKKERLKVIREEKEKRKRLKEKQDADASAAAAVSGAATSQDVRSQLDKN
LEDLGIAPVSSVIHSLESMGSSAVSECSDSLLPGSGEDGKKSLSPGLMRKKKIPVLTVVN
VQSTNIPPKESVTYAKGTQTHDSGADVLPTRRIVGGAFDYYTLTYDEEYEEDSLPGLGSP
SSGSPSNYLNKLPPGILTHGMPEVKEIKPATTKEEEEDEAMKKKLESRRRKELSEEEKQV
IMMKEDFQKFFDRTTRLVERALCEDVNVFVDYTGNYENDGEGMEDKGGNKLSLNRYFYDE
RWSKNRVITCMDWSTVHPELLLSSYNQNPESPHEPDGICLVWNTKFKKDTPEYIFHCQSA
VMSCCFARFHPNLILGGTYSGQIVLWDNRVQKRTPVQRSPLSALAHTHPVYCMKVVGTQN
AHNLISISTDGKLCSWSLDMLADPQETLNLQHKQTKSITATCLSFPVGDVNNFVFGTEEG
TVYTACRHGSRAGVLDAFEGHQAPVTGINTHNGQGPIDFSHLFLTSSFDWTVKLWSLKEN
KPLYSFEDNGDYVYDTAWSPIHPAMFATVDGTGRLDIWNLNNDTEVSEASVIVDGSPALN
RVSWTQSGLHVTVGDDTGKIWVYDVGEQLAHPGPDEWNKFAHTLQDIKNNTSEEHDFDKF
GGDLSGGSALAKTGPSSLTPLTTLSSSPLR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaagggaggatgaaaagcaagaaaaggaaaagggagaagaagaagagctagag
agagggagagggagagggagaagtaaagagacaaaactgaaaatggttgttggatccaat
gtagaagagataaagaaacctttgaaaacggattcaccaagtggtagcagcagtcggctt
agcgccatgtctgatcgcaaagcggagttagagcgaaagaaggagcggctaaaggtcatc
cgggaagagaaagaaaagcgaaaaaggttgaaggagaagcaagatgcggatgcttctgca
gcagccgcagtctcaggggctgcgaccagccaggatgttcgatcccagcttgacaaaaat
ctggaagaccttggcattgctccagtctcttctgtgattcattccctggagtcgatggga
tcgtcagcagtctctgaatgttctgactcgctccttcctgggagtggagaggacgggaag
aagtctctgagtccgggactgatgaggaagaagaaaatccctgttctgacggtcgtgaac
gtccagtccacgaatatccctcccaaagagagcgtgacttatgcaaaaggtacacaaaca
catgactctggtgcggatgtgcttccaactcgtcgaattgttggaggagcatttgactac
tatacacttacatatgatgaggagtatgaagaggattctttgcctggtcttggatctcca
tcaagtggatcaccttccaactatcttaacaagcttcctcctggtatacttactcatggt
atgcctgaagtgaaggaaattaaaccagcaacaaccaaagaagaggaagaggacgaggca
atgaagaagaaattggagtcgcgaagacgtaaagagctgagtgaagaagaaaagcaagtc
attatgatgaaagaggattttcaaaagttttttgatcgaacaacgcgtctagttgaaaga
gctttgtgtgaggatgtcaatgtattcgttgactataccggtaattatgagaatgatggt
gaaggaatggaggataaaggtggaaacaaattaagtctaaatagatacttttatgacgaa
cggtggtcgaaaaaccgtgtgattacttgtatggattggagtacggttcatccagagctc
ttactttctagttacaatcagaatccagaatctccccatgagcctgatggcatttgttta
gtatggaacacaaagttcaagaaagatacaccagaatatatcttccattgtcaaagtgca
gttatgtcttgttgttttgctcgatttcatcctaatctgattcttggtggaacttatagt
ggacaaatcgttctttgggataatagagttcaaaaacgtaccccagttcagcgatcacct
ttaagcgcattagctcatacacaccctgtctactgtatgaaagttgttggaactcagaat
gcacacaatttaatttcaatatcaactgatggaaagctgtgctcatggagtttggatatg
cttgctgatcctcaagaaactctcaatttacaacacaagcaaacaaagtccattaccgct
acttgtttgtcctttcctgttggggatgttaataactttgtttttggtactgaggaagga
actgtatatacagcttgtagacatggatctagggctggagttttggatgcatttgagggg
catcaagctcctgttactggcattaacacccataatggtcagggacctatagattttagt
catttgtttctgacaagttcatttgattggactgttaaactatggtcacttaaggaaaat
aaacctctttattcatttgaagataatggagactatgtatacgatactgcttggagtcct
atacatccagctatgtttgcaactgttgatggtactggcaggttggacatttggaatttg
aacaatgatacagaagtttcagaagcatctgtgattgttgatggatctccagctttaaat
cgtgtatcttggactcaatctggacttcatgtcactgttggagatgatactgggaagatt
tgggtttatgacgttggagaacagttggctcatcctggacccgatgaatggaataaattt
gctcatactctgcaagatattaagaataatacatcagaagagcatgattttgataaattc
ggaggtgatctgtctggtgggtcagctttggctaaaacaggccctagcagtttgactcct
ttaacaaccttatcgagttcacctttaagatga
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