Lepeophtheirus salmonis (salmon louse): 121127629
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Entry
121127629 CDS
T08214
Symbol
Sec24CD
Name
(RefSeq) protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121127629 (Sec24CD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121127629 (Sec24CD)
Membrane trafficking [BR:
lsm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121127629 (Sec24CD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
121127629
NCBI-ProteinID:
XP_040578984
LinkDB
All DBs
Position
13:14162491..14169309
Genome browser
AA seq
1543 aa
AA seq
DB search
MSLGPPHPHQRPAVSPGLAGPMGSMNLGPPIPSSNGLTNGLHPPKVGTSQAGEVGSPLQN
VLGPKGPGQGFSPSTPHFGTPMPFSSGGPSPRQPPPVSSPFPSSLSSPMQIGPPSMGSGK
PLMPPPVGASTLIQAQGNGGRSTPGSMLPPLPPSISTHGPSPTSIQTNKQSGAPLDANPS
SSAAFDASMSNASLSGIASQSPMGGMYGIGRSTPMSSSGDMPPKSSTGGPPLMSSSGGFD
SMSPHPMQSSAGITLTSTSSGPPPMPSSSGMPPASTTGGPPPMPSFNGMSTSGGPSNILS
SNGIPPASSASGPPLMSSPDGMSLMSSKGSPMPGLGEKIQTSMTSELLPTPVTSAPVESF
SGMSSMSVPGGASLKSSLTNHSSMGMPPMSRQGVSSSMGMPPISTQGASSSMGMPPMSTH
GLSSPMGMPPMSTQAVSSPMGMMPAKSPLGGPSSIGARPTTTPGGFPPMPTSEAPAISTP
GGFPPMSTPGGFPPMSSPGGPLMGMPPMSTPGGFPPTSTSSRTQIGVSPILNPGGSSIGM
QPMPTPGASPMGMPPMSTPGAHPMGMTSISTPGAPPMGMTPMQTPCAPPMGMPSMQTPGA
PPMGMPPMQTPGATPMGMPPMQTPGAHPMGMPPMQTPGAPSMGMPPMQTPGAPPMGMPPM
LTPGTSHMGMPPMLTPGASPMGMPPMSTPGAPPSMSTPGGFPPRSGTLPPPPGPGMSNSH
GGLRPGGYPNIQQPVSNAGGMQPPMMGAQPGYPSQSQFGGAPSSGKRGLDPDNMPSPIAV
MEDDSKNNSGFFDTREKGLVPPLVTTKFVVRDCGNASPRYVRSTMYHIPATPDLMKQCGV
PFGLVITPLALTNEGESEPAVTDFGPGGPVRCVRCKAYMCPFMQFVDGGRRFQCIFCKAT
SDVPQEYFQHLDHNGMRLDHYQRPELCMGTYEVMATKEYCRESVEPLTPGIIFAIDVSYP
MIKEGIVNLVCQNMKELLKTLPTDIHCDKDKMKVGFMAYDNKINFYNIKGVLTQPQQMTV
SDVNDMFVPLVDGFMVDIKDAESVINSLMEQIPVLFGETRETETMLGPVIQAGKEAFKAA
KCSGKLVVFHHNLPICDAPGKLINRDDRKLLNTEKEKAVLSPQSRFYNELGQECVSVGCS
VDLFLFNNAYIDVATLSQICRLTGGQLYKYTYFQSELDGERFLSDLRHNIKRSVVFDAIM
RVRTSTGVRPVDFFGSFYMANSTDTELASINSDMSVACEIKHDDKLTDEDGVYIQIALLF
TSCSGQRRLRIINLSLNTGTNLADMYRSCDLDTIINFTAKQSISRLMESNPKTVKELLIN
NCAQILACYRKNCASNSSVGQLILPECMKLLPLYTNCLIKSDALVGGQDVGCDERAFLMS
IVCSMDVKSSVSFFYPSLIPIHDVDPTESHIPKIIRCSYEKIREDGVYLLENGLHIFMYI
GLGTDSSWVKDIFGVESASQIDVEKVRFDQVRDNPRYKRVSGIIRDLRMRRSRYMRLFFV
RPKDKLDILFKHFLCEDRTGHDGNFSYVDFLCFMHKEIRALLG
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgggacctcctcacccccatcaaaggcctgcagtgagtcctggactcgctggt
cccatgggaagcatgaacttgggtcctccaattccttcttccaatggattgacaaatggc
cttcatcctccaaaagtaggtacgtctcaggctggagaagtcggaagccctttgcagaat
gtccttggacccaaaggcccgggacaagggttttccccttccactccccattttgggact
ccaatgcctttttcatccggggggccatcacccagacagcctccgccagtctcgagtccc
ttcccttcttccctctcatcaccaatgcagattggacccccatccatggggagtgggaag
cccttgatgcctccacctgttggggcatccacattaatacaagcacaagggaatggcgga
agaagcactcctgggagcatgctgccgccgcttcctccctccatatccactcatggacct
tcccccacctccattcaaacaaacaaacaaagtggggctcctcttgatgcaaatccctca
tcttcagcagcatttgatgcatccatgtcaaatgcttctctttctggaatagcctcacaa
agtcctatgggaggaatgtatgggataggtagatctacaccgatgtcatcttcaggtgat
atgcctcccaagtcatcaacaggtgggcctcctctaatgtcatcttctggtggatttgat
tctatgtctccacatcccatgcaatcatcggctggaataactcttacatctacttctagt
ggaccacctccaatgccatcatccagtggaatgcctcccgcgtctactactggtggacca
cctccaatgccatcatttaatggaatgtctacgtctggtgggccttctaatattttatct
tcaaatggaattcctcctgcatcttccgccagtggcccacctctaatgtcatcaccggat
ggaatgtctcttatgtcttctaaaggatcacctatgcctggactaggtgaaaagattcaa
acgtctatgacaagtgaattattacccactccagtgacatcagcacctgtagaaagtttt
tcgggcatgtcttctatgtctgtaccaggaggtgcatccctaaaatcatcattgactaat
cattcttcaatggggatgccacccatgtctagacaaggtgtatcttcgtcaatggggatg
ccacccatatctacacaaggtgcatcctcatcaatggggatgccacccatgtctacacat
ggtttatcctctccaatggggatgccacccatgtctacacaagctgtgtcctctccaatg
gggatgatgccagcaaagtctccattaggtggtccatcttcaattggtgctcgacctaca
accactcctggagggtttcctcccatgccaacctctgaagcgccagctatttctacccct
ggaggtttcccccctatgtctactccaggaggtttccctcctatgtcttctcctggaggg
cccctaatgggtatgccacctatgtctactcctggaggctttcctcccacatcaacatct
agtagaactcaaataggtgtatcacccatccttaatcctggagggtcatccataggtatg
caaccaatgccaactcctggtgcatcccctatgggaatgccgcctatgtcaactcctggt
gcacaccccatgggaatgacatctatatcaactcctggagcaccccccatgggaatgaca
cctatgcaaacaccttgtgcaccccccatgggaatgccatctatgcaaacacccggtgca
ccccccatgggaatgccacctatgcaaacacccggtgctacccccatgggaatgccacct
atgcaaacacccggtgcacaccccatgggaatgccacctatgcaaacacccggtgcaccc
tccatgggaatgccacctatgcaaacacctggggcacccccaatgggaatgccacctatg
ctaacgcctggtacatctcacatgggaatgccacctatgctaacgcctggtgcatccccc
atgggaatgccacctatgtctacacctggggcacctccttctatgtctacacccggaggt
tttcctccaagatcaggtacattacctcctccccctgggcctggtatgtcaaattcccat
ggtggacttagacctggtggatatccaaatatacaacaacctgtatcaaatgctggtgga
atgcaaccaccaatgatgggcgctcaaccaggatatccatctcagtctcagtttggaggt
gctccttcgagcggaaaaagaggactagatccggataatatgcctagtcccatagcagta
atggaagatgattcaaaaaataattctggcttttttgatacaagagagaagggattagtt
cctcccctagttacaacaaagtttgttgtgagagattgtggaaatgcctctccaagatat
gttagatcaactatgtatcacattcctgctactcctgatcttatgaaacaatgtggagta
ccttttggcttagttataacaccattggctttaactaatgaaggagaatcagaacccgcc
gttactgattttggacccggaggtcctgtacgttgtgtacgttgtaaagcatatatgtgt
ccttttatgcaatttgttgatggtggtcggagatttcaatgtatattttgtaaagctacc
tccgatgttcctcaagaatattttcaacatttggaccataatggaatgagacttgatcat
tatcaaagacctgagttatgtatgggaacatatgaggttatggccacaaaagaatattgt
cgagagtcagtggagcctcttacacctggaatcatatttgctattgatgtttcctatcca
atgatcaaggaagggattgtgaaccttgtgtgccaaaatatgaaagagttactcaaaaca
ttacccactgatatccattgtgacaaagataaaatgaaagtgggttttatggcatatgac
aataagatcaatttttacaatatcaaaggtgttctgactcaaccccaacaaatgactgtc
agtgatgttaatgatatgtttgttcctctggttgatggctttatggtggatatcaaggat
gctgaatctgtaattaacagtctaatggaacaaattcctgttttatttggagaaactcgt
gaaactgaaaccatgttaggtcctgttattcaagctggaaaagaagcatttaaagcggca
aagtgctccggaaaattagttgttttccatcacaatcttcctatttgtgatgccccagga
aaacttattaatcgagatgatcgaaagcttcttaatactgagaaggaaaaagcggtttta
tctccacaatcaaggttctataacgaacttggacaggagtgtgtttcggtgggatgttca
gtcgatcttttccttttcaataatgcctacatagatgttgccactttgagtcaaatttgt
agacttacaggaggtcaactttacaaatacacctactttcaatctgagttagatggagaa
agatttctaagtgatctaagacataatatcaaacgatccgttgtgttcgatgctattatg
agagtaagaacttcgactggtgttcgaccagttgacttctttggaagtttttatatggcc
aattctacagacacagaacttgcttcaataaactctgatatgtctgtagcttgtgagatt
aagcacgatgacaaattgacagatgaggatggtgtttatatacaaatcgctttgttgttc
acatcttgttctggacagcgtaggctacgaataattaatttatcacttaacactggtacc
aatttagctgatatgtatagatcatgtgatttggacacgataataaacttcactgcgaaa
caatcaatcagccgtctgatggagtcaaatccaaaaacagtgaaagagttacttatcaac
aattgtgcccaaatactagcttgttatcgtaaaaattgtgcatccaattcatctgtgggt
caattaattcttccagagtgcatgaaattacttcctctctacaccaattgtctcattaaa
tcagatgctttggttggaggtcaggatgttggatgtgatgagcgagcctttttaatgagt
attgtttgtagtatggatgtcaaatcttcagtttcattcttttatccgagccttattcca
attcatgatgttgatcccacagaaagtcacatccctaaaataataaggtgcagttacgaa
aagatacgggaagatggtgtttatcttttggaaaatggtttacacatatttatgtacatt
ggattaggaacagattcatcctgggttaaagacatttttggggtggaaagtgcttctcaa
attgatgttgagaaagtaagatttgatcaagttagagataatcctcgttataagagagtc
tctggaattataagagatcttagaatgagaagatcaagatacatgaggcttttctttgtt
cgaccgaaagataaattagatatactctttaaacattttctatgtgaagatcgtactgga
catgatggtaacttttcctacgttgatttcctttgctttatgcataaagagattcgagcc
cttctcggatga
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integrated database retrieval system