Lepeophtheirus salmonis (salmon louse): 121128907
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Entry
121128907 CDS
T08214
Symbol
para
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsm04040
]
121128907 (para)
Ion channels [BR:
lsm04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121128907 (para)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Na_trans_assoc
IQ_SCN5A_C
GPHH
SieB
Motif
Other DBs
NCBI-GeneID:
121128907
NCBI-ProteinID:
XP_040580437
LinkDB
All DBs
Position
14:20186023..20342948
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AA seq
2236 aa
AA seq
DB search
MSEDSDSQIEDDRPIFVPFTRESIAKIEARILEDNEKKRELQQKRAEGEVRYDDDDDDDG
PIPDPTLEAGMPLPIRMAAEFPPELVATPIVDIDSFYSNKKTFIVISKGRDIFRFNAEDA
LYVLSPFSPVRRVAIHILVHPFFSVFIITTILLNCLMMIKTSNERIESSEVIFTAIYTFE
SATKVMGRGFILCPFSYLRDAWNWLDFIVITLAYITMGIDLGNLAVLRTFRVLRALKTVA
IIPGLKTIVGAVIESVKNLRDVIILTVFSLSVFALLGLQIYMGVLTQKCIHDFPWSSIPP
EERGNYSSHIAWNKFNLNSSNWYWIEGRIDPVLCGNSSGAGECPDNYTCLQGFGRNPNYD
YTSFDTFGWAFLSAFRLMTQDLWEDLYQSVLRTAGPWHVIFFLVIIFLGSFYLVNLILAI
VAMSYDELQKKAEEEEEAAQAEEEALREAEEAAAIAEMKLNCNFDEEDEDESEEEDEKPY
ENDEDELSCTSDLQHFKKDSYSKIVTPSSVLPEDKGMMMGRRCPNQHEWHITPNADTNDK
DSSLSLPGSPFNLRRSRIGSEGSIQLSWKSSCGRGAHKTCPHQNLIIDTLPYADDSEAGS
PLPPESEEGQLSGLEYWLETNNNNTFYTNNNFSTHQHHFDQSKNNSINNNNFTHYNFDNG
QRSRQPSYCSHASRWSYSSHVPRQFGLGSASFYFGEEDTTRNGVVSESTIPLNYLDVDKF
DDLSSYPKGQPPDFNGTNGVHYRRRSQESYYSNPFISPNERHASVNIKDVLVLNDIINQA
SARVTSTIKNPESTRSSRQLERKQREARKISLYLEAKHDEEGPRVKEKLVAWFDKCIDIF
CVWDCCWAYVKLTEYLSFIIFDPFVDLFITLCILVNTFFMGLDHHDMDPDIHKTLQNGNY
FFTATFAIESCIKLMAMSPKYYFLEGWNIFDFIIVSLSLIELGLVNVSGLTVLRTFRLLR
VFKLAKSWPTLNLLISIMGKTVGALGNLTLVLCIIIFIFAVMGMQLFGKSYVDNIDRFPN
KSLPRWNFVDFMHSFMIVFRVLCGEWIESMWDCMWIASKVCVPFFLATVVIGNLVVLNLF
LALLLSSFGASNLSAAGGNDEDTNKLSEAFNRLRRLRVFLQKIISRGLKYVKDKIILCFR
QIFNARREALMRQNRASTEINQEHRTLKKDQHIVSYDVKIGDGMDIAIQGENGDIDKWQT
AIRHHSLIKLKNFDDFSFEDNTSETSYRSHKNRNFNTGSHKGSVVSISNPKEAIILEQPN
GGVAGHRVVLLDDSFEEDEEDYDYDEDYEAKLEKEIFDATAQEILMHEYPSECCPDKFYL
RLPFLAGDPDSPFWQGWGNLRIKTFRLIENKYFETAVIVMILISSLALALEDVYLPSRPV
LQDVLYYMDRIFTVIFFLEMCVKWLALGFVKYFTNAWCWLDFVIVMFSILNLVASFFGVG
NIPIFKTIRTLRGLRPLRALSRIGGMKVSLINFTASLLGAGGIQAFKTMRTLRALRPLRA
MSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQMFAGKYYKCVDIVTGEKIS
AEIVPDVVTCLAENNTEWVNSRITFDHVGHAYISLFQVATFKGWLPIMNDAIDSRDCEDA
EGNRLNASYTPDKETCLLENQYWVNSVHNFDNVGSAYLSLFQVAIFKGWTGVLYDALDSS
GIGQQPIREVNLYMYWYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKIRGSLEMFMTDDQ
KKYYAAMKKMGNKKPVKATPRPKWKPQAVVFGIVTNKKFDMIIMIFIGLNMLTMTLDHYG
QSEMWSFALDNLNIGFIVIFTTECVLKIFALRLYYFREPWNIFDFVVVILSILGIVLSDL
IEKYFVSPTLLRVVRVAKIGRVLRLVKGARGIRTLLFALAMSMPALFNICLLLTLVMFIF
AIFGMSFFMNVKKRGGLDDVYNFETFGKSMILLFQMSTSAGWDGVLNGIINEEDCEIENE
ETGVAGNCGNMAMGIAFLLTYLIISFLIIINMYIAVILENYSQATEDVQEGLTGDDYDMY
YEIWQQFDPNGTQYLKYNALSDFLDVLEPPLQIHKPNKYKIVSMDIPICKKDLCYCVDVL
DALTKDFFARKGNPVEETVELGEVTAQSERPGYDPISSTLWRQREDYCARLIQRAWKKKN
IRNTFGGSLSTYPEGITPRSYEHRRRSSSVIHYHHQHTAPDTPTAGVVKAGTDAVSVVLV
HPRSSSIGSAHEGAPV
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagactctgattcacagattgaggacgaccgaccaattttcgtaccttttacg
agggaatccattgctaaaatcgaagctcgcatccttgaagacaatgaaaaaaaacgagaa
ctccaacaaaagcgtgcagaaggagaagtgcgatacgatgatgacgatgatgatgatggg
cctattcctgatcctacattggaggctggaatgccgcttccaatacgaatggcggcagag
ttccctccagagctcgtggctactcctatcgtcgatatagactctttctacagcaacaaa
aagacattcattgtcatcagcaagggacgcgatatttttcggttcaatgcggaagacgcc
ttatacgtactctcgcccttttcacccgtccgccgtgtggccatccatatcctcgtgcat
ccgttcttttctgtcttcattattaccaccatccttttaaactgcctcatgatgataaaa
acatcaaacgaaaggattgaatcatccgaagttatttttacagctatttatacatttgaa
tcagccaccaaagtcatgggaaggggattcatcctttgtccgttttcatatctaagagat
gcatggaactggctggatttcattgtcataactttagcttatataacgatgggaatcgat
cttggaaacttggctgttcttcgtacatttcgtgttcttagggctctcaaaactgtggcc
atcattccaggtttaaaaacaattgttggagctgtgatcgagtccgtcaaaaatctccga
gatgtgatcatattaactgtattttctttatctgtatttgccctactgggtctccaaatt
tacatgggggtattgactcaaaagtgtattcatgactttccctggtcctcaattccccct
gaggaaagagggaattactcatctcatatcgcatggaataagttcaatttgaattcctct
aattggtattggattgagggtcgaatcgatcctgtactttgtgggaattcctccggagct
ggggaatgtccagacaattatacatgtcttcaaggatttggaagaaatcccaactatgac
tatacgagcttcgatacatttggatgggctttcctctctgctttccgtctcatgactcaa
gatctttgggaagatttatatcaaagtgttttgcgcacggctggtccctggcacgttata
tttttcctcgtgataatcttcttaggttcattctatttagttaatctcatattggctatt
gtagctatgagctatgatgaacttcaaaagaaggcagaagaggaagaggaggccgctcaa
gctgaggaagaggctctcagagaggcagaagaggcggcagctatagcagaaatgaaactg
aactgtaatttcgacgaagaagatgaagacgaatccgaagaggaggatgagaagccctat
gagaatgacgaagatgaactcagttgcacatccgatcttcagcactttaaaaaggattcc
tatagcaaaattgtgactccgtcctcagttttacccgaagataaagggatgatgatggga
agacgatgtccgaatcaacatgaatggcacatcactcctaatgcggatacaaatgataag
gatagcagcctcagcctcccagggtcaccctttaatttgcgccgctctcgcattggatct
gagggtagtatacagctttcctggaaatcatcctgcggccgaggagcacacaaaacctgc
cctcaccagaatttaataattgacaccctcccatatgccgacgattccgaggccggatcc
ccgctcccgccggaaagtgaggagggccaactctctgggctagagtactggctagaaacc
aataacaataacactttttatactaacaacaatttctcaactcatcagcaccattttgat
cagtcgaaaaataatagtattaataataataatttcacacattacaactttgataatgga
caaagatcccgtcagccttcctactgctcgcatgcctcacgctggtcgtattcttcacat
gttcctagacagtttgggcttggctctgcatctttctattttggtgaagaggataccact
cgaaatggtgttgtatcagagtctaccattccattaaactacctcgacgttgacaagttc
gacgatttatcctcctacccaaaaggtcaaccacctgactttaacggaactaatggagtt
cattatcgtcgacgtagtcaagaaagttactattcaaatccgtttatatctccaaacgaa
agacatgcatccgtgaatatcaaagatgtattagttttgaatgatatcattaatcaagcc
tctgcgagggtcacaagtacaatcaaaaatcctgaatccacaagatcaagtcgacagttg
gagagaaaacaaagggaagcacgtaaaatatccctctacctcgaggccaaacatgatgaa
gagggtccaagagtgaaggaaaagctagtggcatggtttgataaatgtatcgatattttt
tgtgtttgggactgttgttgggcctatgttaagctcacagagtatttatcctttattata
tttgatccttttgtggacttgttcataacgctttgtatattggtgaacacgttttttatg
gggctggatcatcatgacatggatccagatatccataaaacacttcaaaatggaaattac
ttttttacagcaacgtttgcaatagagtcttgtatcaaactaatggcaatgagtcccaaa
tactatttcctcgagggttggaatatctttgatttcataatagtatctctatcacttatt
gaattgggattagtaaatgtctctggccttaccgtcctacgtacctttagattacttcgt
gtttttaaattagccaagtcatggcccacactgaacttgctcatatccattatgggaaaa
actgtgggcgcacttggaaacttgactctggttttatgtatcattatctttatattcgcc
gtaatgggaatgcaactatttgggaagagctacgtggacaacattgaccgattccctaac
aaatcccttccccgttggaactttgtggactttatgcacagcttcatgattgtgtttaga
gtcctttgtggtgaatggatcgagtccatgtgggactgtatgtggatagcctcaaaagtc
tgcgttcctttcttcctagcgacggttgtgattgggaatctcgtggttctgaatcttttt
ttagctcttttactttcaagctttggtgcttcaaatctctcggctgcaggaggaaatgat
gaggacactaataaattaagcgaggcatttaatcgactccgaaggctccgtgtctttcta
caaaagatcatatcaagaggtctcaaatatgttaaggataaaattattctctgctttcga
caaatattcaatgctaggagagaggcccttatgagacaaaacagagcaagcactgagatt
aatcaagagcatcgaacgctcaaaaaagatcagcatattgtcagttatgatgttaaaatt
ggtgatggaatggatatagccattcaaggcgaaaatggtgatatagacaaatggcaaaca
gccattcgacatcattccctcataaaactaaagaactttgatgactttagctttgaagac
aacacctcagagacctcttatcgtagtcataaaaatcgaaattttaatacagggagtcac
aaaggcagtgttgtgagcatatctaaccccaaagaggctattattctagaacaacccaac
ggaggagtggctgggcatcgagttgttcttctggatgactctttcgaagaggatgaggag
gactatgactacgatgaagactatgaagccaaattggaaaaagagatatttgacgctacc
gctcaagaaatccttatgcacgaatatccctccgaatgttgtcccgataagttttatctt
cgattacccttccttgccggcgatcctgattcccccttctggcaaggctggggcaattta
aggataaaaacttttcgtctcatagaaaataaatattttgaaacggctgtcattgtcatg
atccttattagttctctcgcattggcacttgaggatgtatatctaccaagtcggcccgta
ctccaagatgttctgtattacatggataggatatttaccgtcatattcttcttggaaatg
tgtgtcaaatggcttgctcttggttttgttaaatactttaccaatgcgtggtgttggttg
gactttgtcatcgttatgttttcaatcttaaatttggttgccagtttttttggggtagga
aacattcctatttttaagacgatccgtactttgagaggccttagaccactcagagcatta
tctcgaatagggggaatgaaagtatcactcataaactttacagcctctttattgggtgct
ggtggaattcaggcatttaaaaccatgaggactcttagggctttaaggcccttaagagca
atgtcacgaatgcaaggaatgagggtggttgtcaatgccttagttcaggccatcccaagt
attttcaatgtactccttgtgtgtctaatattttggctcatttttgcaattatgggagtt
caaatgtttgctggaaaatactataagtgcgtggatatagttacgggtgagaaaataagt
gcagagatcgttccagacgtggtaacatgtctggcagagaacaatacggaatgggtcaat
agtcgaatcacatttgatcacgtgggtcatgcctatatttccctctttcaagtagctact
tttaagggatggctacccatcatgaacgatgccattgactctagagattgtgaagatgct
gaagggaatcgtttaaatgcctcctatacacccgacaaggaaacatgcctactagagaat
caatattgggtcaattccgtacataatttcgacaatgtcggaagtgcttatttatcttta
tttcaagtagctatctttaagggatggaccggggttttatatgatgcattggactcttcg
ggaatcgggcaacaacctatacgagaagtaaatctctacatgtactggtattttgtattt
ttcatcatttttggatcctttttcacactgaacctattcattggagtcatcattgataat
tttaacgaacaaaagaaaaagataagagggtccttggagatgtttatgacagacgatcag
aaaaagtactatgcagctatgaaaaaaatgggtaataagaagcccgttaaggctacaccg
agaccaaagtggaaacctcaagctgtggtatttggaatagtcacaaataagaagtttgat
atgatcatcatgatattcattggacttaatatgcttacaatgactcttgatcattatggg
cagagtgaaatgtggagttttgctctagacaatcttaatataggtttcattgttattttc
accacagagtgtgttttgaaaatttttgctttgagactctattatttccgtgagccatgg
aatatttttgactttgttgtcgttattctctctatcttaggtatcgttctgagtgatttg
atcgaaaaatactttgtttccccaacattgctgcgtgttgtgagagtggcaaaaattggt
cgagtattgcgattagtgaaaggtgcaaggggaattcggactttattatttgctctggct
atgtcaatgccggctttattcaacatttgtctcctattaactcttgttatgtttatattt
gcaatttttggaatgtcttttttcatgaacgtgaagaagagaggaggactcgatgacgta
tataactttgaaacatttggaaaatctatgattttgttatttcaaatgtctacctctgct
ggttgggatggagtactcaacggcataatcaatgaggaagactgcgaaatcgagaatgag
gaaactggagtagcgggtaattgcgggaacatggccatgggcattgcattccttttgacg
tatttgattatatcattccttattataatcaatatgtacatcgctgttattttagaaaat
tattcacaagcaacagaagacgtccaagaagggttgacaggggatgattatgatatgtat
tatgaaatatggcaacagtttgacccaaatggaactcaatacctcaaatataacgcatta
tcagatttcttggatgttttagagcctccattgcagatccataagccgaacaaatacaag
attgtgagtatggacattcctatatgtaaaaaagatctctgctattgcgtggatgtattg
gatgccctcaccaaggatttctttgctcggaagggaaatcctgtggaagagactgtagag
ttgggagaagtaacggcacagtctgagagacccggctatgaccctataagctccactctt
tggcgacaaagagaagactattgtgcacggctcatacagagggcctggaaaaagaagaac
attcgaaacactttcggaggtagtttatcaacctatccggagggaattacgcctcggagt
tatgagcatcgaagacgatcctcctctgttattcattaccaccatcaacatactgcccct
gatactcctaccgctggagtagttaaagcaggaactgacgctgtgagtgtagtccttgtg
catccacgatcatcctccataggatccgctcacgaaggtgcaccagtttaa
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integrated database retrieval system
