Lepeophtheirus salmonis (salmon louse): 121131951
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Entry
121131951 CDS
T08214
Name
(RefSeq) polyubiquitin-A
KO
K08770
ubiquitin C
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
lsm04137
Mitophagy - animal
lsm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121131951
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121131951
04137 Mitophagy - animal
121131951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121131951
Ubiquitin system [BR:
lsm04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
121131951
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Motif
Other DBs
NCBI-GeneID:
121131951
NCBI-ProteinID:
XP_040583292
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Position
1:complement(49806693..49811081)
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AA seq
1141 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEAS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
N
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgtgaaaactctcacgggtaaaaccatcacacttgaagtggaagcttca
gacacgattgaaaatgtcaagaccaagatccaggataaggagggaatccccccagatcag
caacgtttgatctttgctggaaagcaattggaggatggacgtacattgtccgactacaac
attcaaaaggaatccactctccacttagtcctgaggttgagaggaggaatgcagatcttt
gtcaaaactttgactggaaagaccattacgctcgaggttgaaccctcagataccattgaa
aacgttaaggccaagattcaagataaggaaggaattcccccagatcagcagagactgatc
tttgctggaaagcagttggaagatggacgtactttgtcagactacaacatccaaaaggaa
tccacccttcatttagtattaagattgagaggaggaatgcagatttttgttaaaactctc
actggaaaaacaatcactcttgaagtggaagcttcagacactattgaaaatgtcaaggct
aaaatccaagataaggaaggaattcctccagatcagcagagattgatttttgctggcaaa
caattagaagatggacgtactttatcagactataacattcaaaaggagtcgacccttcat
ttggtccttagattgagaggaggaatgcaaatctttgttaagaccttaaccggtaaaaca
atcactcttgaagtcgaagcctcagacaccattgaaaatgttaaagccaagatccaagat
aaggaaggtattcccccagatcaacaacgtttaatctttgctggtaaacaattggaagat
ggaagaactctttcagattataatattcaaaaggaatccactcttcatttagtattgaga
ttgagaggaggaatgcagattttcgttaaaaccctcactggaaaaaccatcacacttgaa
gttgaagcctcagacaccattgaaaatgtcaaggctaaaattcaagataaggaaggaatt
cctccagatcagcaaagattgatatttgctggcaagcaattagaagatggaagaactctt
tccgattacaatatccagaaggagtcaacccttcacttggttctcagattgagaggagga
atgcaaatttttgtcaagaccttaactggtaaaactatcactcttgaagtggaagcttct
gatactattgagaatgttaaggctaaaattcaagataaggaaggtattcccccagaccaa
caacgtttgatctttgctggtaaacaattagaggatggaagaacactttcagattataac
atccaaaaggagtccacccttcacttagtcctcagattgagaggagggatgcaaattttt
gtcaagaccttaactggtaaaactatcactcttgaagtcgaagcttctgatactattgag
aatgtcaaggctaaaatccaagataaggaaggaattcctccagatcagcagagattgatt
tttgctggtaaacaattagaagatggacgtactttatcagactataacattcaaaaggag
tccacccttcacttggtcctcagattgagaggaggaatgcagatttttgttaaaaccctg
actggaaaaaccatcacacttgaagttgaagcctcagacacaattgaaaatgtcaaggca
aaaattcaggacaaggaaggaattcccccagatcagcagagattgatctttgctggtaaa
caattggaggatggaagaacactttcagattataacatccaaaaggagtccacccttcac
ttagtcctcagattgagaggaggaatgcagattttcgttaaaaccctcactggaaaaacc
atcacacttgaagttgaagcctcagacactattgaaaatgtcaaggctaaaatccaagat
aaggaaggaattcccccagatcagcaaagattgatatttgctggcaagcaattagaagat
ggaagaactctttccgattacaatatccagaaggagtcaacccttcacttggttctcaga
ttgagaggaggaatgcaaatttttgtcaagaccttaactggtaaaactatcactcttgaa
gtcgaagcttctgatactattgagaatgttaaggctaaaattcaagataaggaaggtatt
cccccagaccaacaacgtttgatctttgctggtaaacaattagaggatggaagaacactt
tcagattataacatccaaaaggagtccacccttcacttggtcctcagattgagaggagga
atgcagatttttgttaaaactctgactggaaaaaccatcacacttgaagtggaagcttca
gacacaattgaaaatgtcaaggctaaaattcaagataaggaaggtattcccccagaccaa
caacgtttgatctttgctggtaaacaattagaggatggaagaacactttcagattataac
atccaaaaggagtccacccttcacctggtcctcagattaagaggaggaatgcaaatcttt
gttaagaccttaaccggtaaaacaatcactcttgaagtcgaagcttcagacacaattgaa
aatgttaaagccaagatccaagataaggaaggtattcccccagatcaacaacgtttaatc
tttgctggtaaacaattggaagatggaagaaccctttcagattataatattcaaaaggaa
tccactcttcatttagtattgagattgagaggtggaatgcaaatctttgtcaaaaccctt
actggtaaaacaatcactcttgaagtcgaagcttctgatactattgaaaatgttaaagct
aaaattcaagacaaggaaggtattcccccagatcaacaacgtttaatctttgctggtaaa
caattggaagatggaagaacgctttcagattataacattcaaaaggaatctactcttcat
ttagttttaagattgagaggtggaatgcagattttcgttaaaaccctcactggtaaaaca
atcactcttgaagttgaagcttctgatactatagaaaatgttaaggctaaaattcaagac
aaagaaggtattcctccagatcagcaacgtttgatctttgctggtaaacaattagaggat
ggacgtactttatcagactataacattcaaaaagagtccacgttgcatttagttttaaga
cttagaggtggtatgcagatttttgttaagactttgacaggaaagaccattaccttggaa
gttgagccctctgataccattgagaatgttaaagccaaaattcaagacaaggagggcatt
cctccagatcagcaacgtttgatctttgctggtaaacaattggaagatggacgcacttta
tccgattataacattcaaaaagaatctacccttcacttggttttgcgccttcgtggtgga
aattaa
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