Lonchura striata domestica (Bengalese finch): 110467740
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Entry
110467740 CDS
T05897
Symbol
TRIM36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110467740 (TRIM36)
04121 Ubiquitin system [BR:
lsr04121
]
110467740 (TRIM36)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110467740 (TRIM36)
Membrane trafficking [BR:
lsr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
110467740 (TRIM36)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110467740 (TRIM36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
fn3
zf-C3HC4_4
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
Phasin
DUF4200
DUF2420
Motif
Other DBs
NCBI-GeneID:
110467740
NCBI-ProteinID:
XP_021380674
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Position
Z:17587608..17624671
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AA seq
750 aa
AA seq
DB search
MRPARGAAAASRRLRATLERELSSPGTDSEMVAIKGIERELICPACKELFTHPLIIPCQH
NVCHKCVKEILFAFEDSFADGGSESSNQSSPRIRISASSMDRIDRINRSVSQRRSFGCRG
RKRNSLTPRSTLFPCPSCQRDIDLGERGINGLFRNFTLETIVERYRQAARAAVAIMCDFC
KPPPQESTKSCMDCSASYCNECFKIHHPWGTVKAQHEYVGPTTNFRPKILMCPEHEMERV
NMYCEICRRPVCHLCKLGGSHANHRVTTMSTAYKTLKEKLSKDIEYLISKESQVKAHITQ
LDLLLKETECNSERAKQEASQSFEKLYHVLEEKKSAALRAIETSKNIRLEKLQTQVEEYQ
GLLENNGLVGYAQEVLKETDPSCFVQTAKQLHVRIQKATESLKSFRPAAETTFEHFVVDT
AKQEDILGDLSFHSNGLEIPEINEAQSRMYNKALISWECPGKTESADTYVLEYHKLNKEE
ESVTWQKTEVCGKSKVLSDLDDDSSYAFRVRGYKGSICSPWSREVIMRTPPAPVFSFLFD
DKCGYNNEHLQLNPRRTSVESRAGFPLLLGSERLQVGCYTTLDYIIGDTGIAKGKHFWAF
TVEAYSYLVKVGVVPSNKIQKLFHNTHDVTSPRYEQDSGHDSGSEDAFFDSSQPCTLVTL
GMKKFVIPATPAAPKDPASRILPLPSCLGICLDCDRGRVGFYDAGRMKCLYECEVDCSGL
MYPAFALMGSAAVHLEEAVTAKYREYHDDI
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgcccggggggctgctgctgctagccgccggctgcgggcaacgctggagaga
gaactgtcttccccaggcaccgattcagagatggttgccattaagggtattgaaagagag
cttatctgcccagcatgcaaagaattgtttacccatccgctgatcattccctgccagcac
aatgtctgtcacaaatgtgtgaaagaaatactttttgcatttgaagactcctttgctgat
ggaggctctgaatcctctaatcagagtagccctcgaattagaatctctgcttctagcatg
gacagaattgacaggattaatagatcagtctcacagaggaggtcttttgggtgcagaggc
agaaaacgaaattcactgactcctagatcgactctgtttccttgtccaagttgccagcgg
gatattgatcttggggagcgtggcatcaatggcttatttcgcaacttcactttggaaacc
attgtggaaagatacagacaggcagccagggcagctgttgctattatgtgtgatttctgc
aaacctccacctcaggagtccacaaagagctgcatggactgcagtgcaagctactgcaat
gaatgtttcaaaatccaccatccttggggaactgtgaaagcccagcatgaatatgtagga
ccaaccaccaacttcagacccaagattttgatgtgtccagaacatgaaatggagagagta
aacatgtactgtgaaatctgcagaaggcctgtttgtcatctttgcaaactgggtggaagt
catgcaaaccatagagtaacaaccatgagcactgcctacaaaacccttaaggagaagctt
tcaaaagatatcgagtaccttatcagtaaggagagccaggtgaaagctcacatcacacag
ctggatctgctgctgaaagaaacagagtgcaacagtgaaagagctaaacaagaagcatct
cagagttttgagaaattataccatgtcctggaagagaagaaatctgcagctcttagggca
attgaaacctctaagaatataaggctggaaaaattgcaaacacaagtggaagaataccaa
gggctcctggaaaataatggccttgtaggatatgctcaagaagtgctgaaagaaactgat
ccctcctgttttgttcaaacagcaaaacaacttcatgtcagaatccaaaaagctactgag
tctctgaagagctttaggccagcagctgaaaccacttttgaacactttgtggtggacact
gccaagcaagaagacatccttggtgacctgtccttccattccaatggtctagaaatacca
gaaatcaatgaagcgcagagcagaatgtacaacaaagctctaatcagctgggaatgccct
gggaagacagagtcagctgatacttatgttcttgagtatcataaacttaataaagaagag
gagagtgtgacatggcaaaagactgaagtttgtggcaagagcaaagtattatctgatctt
gatgatgacagcagctacgcctttagagttcgaggctacaaagggtccatctgtagccct
tggagcagagaagttattatgcgtactcctccagccccagttttcagttttctttttgat
gacaaatgtgggtacaacaatgaacatctccagctgaacccaagaagaacctcggtggaa
agtagggctggatttcctctgcttctgggatctgagcgcttgcaggttggatgctacaca
accctggattacatcattggtgacactgggattgccaaagggaagcacttctgggctttt
actgtggaagcctattcatacctggtgaaagtgggagttgttcctagcaacaagatacag
aaattgttccacaatacccatgatgtgaccagtccaagatacgagcaagacagtggtcat
gacagtgggagtgaagatgccttcttcgactcatcgcagccttgcacactggtcacttta
ggcatgaagaagtttgttatccctgctacacctgctgctcctaaggatccagccagcaga
atccttcccctgccatcatgcttgggcatttgccttgactgtgacagaggcagggtagga
ttttatgatgcaggccgtatgaagtgcctgtatgaatgtgaggtggattgctctggctta
atgtacccagcgtttgctttaatgggcagtgcagcagtgcaccttgaggaagctgtcaca
gccaagtacagggagtaccatgacgacatctag
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