KEGG   Lonchura striata domestica (Bengalese finch): 110467740
Entry
110467740         CDS       T05897                                 
Symbol
TRIM36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
  KO
K12013  tripartite motif-containing protein 36 [EC:2.3.2.27]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsr04131]
    110467740 (TRIM36)
   04121 Ubiquitin system [BR:lsr04121]
    110467740 (TRIM36)
Enzymes [BR:lsr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110467740 (TRIM36)
Membrane trafficking [BR:lsr04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    110467740 (TRIM36)
Ubiquitin system [BR:lsr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    110467740 (TRIM36)
SSDB
Motif
Pfam: COS zf-B_box zf-RING_UBOX fn3 zf-C3HC4_4 zf-C3HC4 SPRY zf-C3HC4_3 zf-C3HC4_2 Phasin DUF4200 DUF2420
Other DBs
NCBI-GeneID: 110467740
NCBI-ProteinID: XP_021380674
LinkDB
Position
Z:17587608..17624671
AA seq 750 aa
MRPARGAAAASRRLRATLERELSSPGTDSEMVAIKGIERELICPACKELFTHPLIIPCQH
NVCHKCVKEILFAFEDSFADGGSESSNQSSPRIRISASSMDRIDRINRSVSQRRSFGCRG
RKRNSLTPRSTLFPCPSCQRDIDLGERGINGLFRNFTLETIVERYRQAARAAVAIMCDFC
KPPPQESTKSCMDCSASYCNECFKIHHPWGTVKAQHEYVGPTTNFRPKILMCPEHEMERV
NMYCEICRRPVCHLCKLGGSHANHRVTTMSTAYKTLKEKLSKDIEYLISKESQVKAHITQ
LDLLLKETECNSERAKQEASQSFEKLYHVLEEKKSAALRAIETSKNIRLEKLQTQVEEYQ
GLLENNGLVGYAQEVLKETDPSCFVQTAKQLHVRIQKATESLKSFRPAAETTFEHFVVDT
AKQEDILGDLSFHSNGLEIPEINEAQSRMYNKALISWECPGKTESADTYVLEYHKLNKEE
ESVTWQKTEVCGKSKVLSDLDDDSSYAFRVRGYKGSICSPWSREVIMRTPPAPVFSFLFD
DKCGYNNEHLQLNPRRTSVESRAGFPLLLGSERLQVGCYTTLDYIIGDTGIAKGKHFWAF
TVEAYSYLVKVGVVPSNKIQKLFHNTHDVTSPRYEQDSGHDSGSEDAFFDSSQPCTLVTL
GMKKFVIPATPAAPKDPASRILPLPSCLGICLDCDRGRVGFYDAGRMKCLYECEVDCSGL
MYPAFALMGSAAVHLEEAVTAKYREYHDDI
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgcgccctgcccggggggctgctgctgctagccgccggctgcgggcaacgctggagaga
gaactgtcttccccaggcaccgattcagagatggttgccattaagggtattgaaagagag
cttatctgcccagcatgcaaagaattgtttacccatccgctgatcattccctgccagcac
aatgtctgtcacaaatgtgtgaaagaaatactttttgcatttgaagactcctttgctgat
ggaggctctgaatcctctaatcagagtagccctcgaattagaatctctgcttctagcatg
gacagaattgacaggattaatagatcagtctcacagaggaggtcttttgggtgcagaggc
agaaaacgaaattcactgactcctagatcgactctgtttccttgtccaagttgccagcgg
gatattgatcttggggagcgtggcatcaatggcttatttcgcaacttcactttggaaacc
attgtggaaagatacagacaggcagccagggcagctgttgctattatgtgtgatttctgc
aaacctccacctcaggagtccacaaagagctgcatggactgcagtgcaagctactgcaat
gaatgtttcaaaatccaccatccttggggaactgtgaaagcccagcatgaatatgtagga
ccaaccaccaacttcagacccaagattttgatgtgtccagaacatgaaatggagagagta
aacatgtactgtgaaatctgcagaaggcctgtttgtcatctttgcaaactgggtggaagt
catgcaaaccatagagtaacaaccatgagcactgcctacaaaacccttaaggagaagctt
tcaaaagatatcgagtaccttatcagtaaggagagccaggtgaaagctcacatcacacag
ctggatctgctgctgaaagaaacagagtgcaacagtgaaagagctaaacaagaagcatct
cagagttttgagaaattataccatgtcctggaagagaagaaatctgcagctcttagggca
attgaaacctctaagaatataaggctggaaaaattgcaaacacaagtggaagaataccaa
gggctcctggaaaataatggccttgtaggatatgctcaagaagtgctgaaagaaactgat
ccctcctgttttgttcaaacagcaaaacaacttcatgtcagaatccaaaaagctactgag
tctctgaagagctttaggccagcagctgaaaccacttttgaacactttgtggtggacact
gccaagcaagaagacatccttggtgacctgtccttccattccaatggtctagaaatacca
gaaatcaatgaagcgcagagcagaatgtacaacaaagctctaatcagctgggaatgccct
gggaagacagagtcagctgatacttatgttcttgagtatcataaacttaataaagaagag
gagagtgtgacatggcaaaagactgaagtttgtggcaagagcaaagtattatctgatctt
gatgatgacagcagctacgcctttagagttcgaggctacaaagggtccatctgtagccct
tggagcagagaagttattatgcgtactcctccagccccagttttcagttttctttttgat
gacaaatgtgggtacaacaatgaacatctccagctgaacccaagaagaacctcggtggaa
agtagggctggatttcctctgcttctgggatctgagcgcttgcaggttggatgctacaca
accctggattacatcattggtgacactgggattgccaaagggaagcacttctgggctttt
actgtggaagcctattcatacctggtgaaagtgggagttgttcctagcaacaagatacag
aaattgttccacaatacccatgatgtgaccagtccaagatacgagcaagacagtggtcat
gacagtgggagtgaagatgccttcttcgactcatcgcagccttgcacactggtcacttta
ggcatgaagaagtttgttatccctgctacacctgctgctcctaaggatccagccagcaga
atccttcccctgccatcatgcttgggcatttgccttgactgtgacagaggcagggtagga
ttttatgatgcaggccgtatgaagtgcctgtatgaatgtgaggtggattgctctggctta
atgtacccagcgtttgctttaatgggcagtgcagcagtgcaccttgaggaagctgtcaca
gccaagtacagggagtaccatgacgacatctag

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