Lonchura striata (white-rumped munia): 110468415
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Entry
110468415 CDS
T05897
Symbol
ITGB6
Name
(RefSeq) integrin beta-6 isoform X1
KO
K06589
integrin beta 6
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04510
Focal adhesion
lsr04512
ECM-receptor interaction
lsr04518
Integrin signaling
lsr04810
Regulation of actin cytoskeleton
lsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110468415 (ITGB6)
04518 Integrin signaling
110468415 (ITGB6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110468415 (ITGB6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110468415 (ITGB6)
04810 Regulation of actin cytoskeleton
110468415 (ITGB6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsr04147
]
110468415 (ITGB6)
04515 Cell adhesion molecules [BR:
lsr04515
]
110468415 (ITGB6)
Exosome [BR:
lsr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
110468415 (ITGB6)
Cell adhesion molecules [BR:
lsr04515
]
Integrins
Integrin beta subunits
110468415 (ITGB6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
DUF8130
DUF2970
Motif
Other DBs
NCBI-GeneID:
110468415
NCBI-ProteinID:
XP_021382011
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Position
7:21994272..22021954
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AA seq
789 aa
AA seq
DB search
MGIELLCLCFLFLLRNNYVQGTCSQESTVTCEDCLLSGPHCAWCLQENYTDSSGIHGRCD
TLENLLSKGCQLNFIEFPISEVEIHRNDPLTASSQKTSSDVTQISPQKLTLRLRPGHAET
IQIKVRQTEDYPIDLYYLMDLSASMDDDLNTIKELGSTLSKEMSKLTSNFRLGFGSFVEK
PVSPFIKTTAAEIKNPCRSVPYECLPTFGYKNVLPLTNDAKKFNEIVKGQRISANIDTPE
GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGNCHLDHNNE
YSMSTVQEYPTIGQLIDKLVQNNVLLIFAVTNEQVHLYENYAKLIPGATVGRLQKDSGNI
LQLIIAAYQELRSEVELEILGETEGLNLSFTAICNNGTFFPHQRKCSHVKVGDTVSFNVT
VSLASCDKPRRLIKIKPVGLSDMLEMEIHPLCSCNCQAKAEKKSPKCSQGKGSLECGVCV
CSPGYVGPRCECHESSLGASSCRGPAEHSSCSGRGDCLCGQCLCHPSPYGKVYGPRCECN
DFSCVRHRGLQCAGNGDCDCGECRCYSGWTGEYCNCTTDTSTCIAEDGTLCSGRGECICG
TCACTHPGASGQTCEKCPLCGDPCSSRWSCVECHLASDDKSLGDCSEKCKLVDATVSVAK
DYSEDKSISCSLQGENECITTFLLSVDEQGRTVIHSIERKDCAQHPNIPMIVVGVTLAIL
LIGIVLLCIWKLLVSLQDRKEVAKFEAEKSKVKWQTETNPLYRGSTTTFKNVTYKNQDMH
KRPMAADFY
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggggattgaattgctttgcctctgtttcctattcctgctaagaaataactatgtgcaa
gggacctgttctcaggaaagcacagtgacttgtgaagattgtttgctttccggaccacac
tgcgcttggtgtttgcaagagaattacacagactcatctggaattcatgggaggtgtgat
accctggaaaatcttttgtccaaaggatgccagctgaatttcattgagttccccatttca
gaagtagaaattcacagaaatgatcccctaactgcatcatcccagaagaccagttctgat
gtcacacagatttctccccagaaattaactctgaggctgcgaccaggacatgcagaaaca
atacagatcaaggttcgccagactgaagattatccaattgatctctactacctcatggat
ctttcagcttccatggatgatgatctgaatacaatcaaagaactgggttcaacactttcc
aaagagatgtcaaaactgacaagcaactttagactggggtttggatcttttgttgaaaaa
ccagtttcaccatttatcaaaactacagctgcagaaataaagaacccttgcagaagcgta
ccatacgagtgcttacccacctttggatataaaaatgttttgcccctaacaaatgatgct
aaaaaattcaatgaaattgtgaaaggacagcgaatttctgctaatatagacactccagag
ggaggatttgatgcaatcatgcaggcagcagtttgcaaggaaaaaattggctggaggaat
gattctctacatttgctggtgtttgtgagtgatgctgattcccattttgggatggacagt
aaactggcagggattgttattcctaatgatgggaactgtcatttggaccacaataatgaa
tattccatgtcaactgttcaggagtatccaacaattggacaattaattgacaaactcgtg
caaaacaatgttcttttaatttttgctgtaacaaatgagcaagttcacttatatgagaat
tatgcaaagcttattcctggtgctaccgttggacgactacagaaggattctggaaatatt
ctccagttgatcattgctgcatatcaggagctgaggtctgaggttgaattggagatcctg
ggagagacagaagggctcaatctctccttcacagccatctgtaacaatgggacctttttt
ccacatcagaggaaatgctctcatgtgaaagtgggagatacggtctctttcaatgtgact
gttagtctcgcttcttgtgacaaacccagaaggcttatcaagataaaacctgtggggctc
agcgacatgctggagatggaaattcatcccctctgcagctgtaactgccaggccaaggcc
gagaagaagagcccgaagtgcagccaaggcaaaggctccctggagtgcggggtgtgcgtg
tgcagccccggctacgtggggccgcgctgcgagtgccacgagagctccctcggtgccagc
tcctgcaggggcccggccgagcacagctcctgcagcgggagaggcgactgcctctgcggg
cagtgcctgtgccacccgtccccctacgggaaggtctacgggccccgctgcgagtgcaac
gacttctcctgcgtcaggcaccgcggcctgcagtgcgcgggcaatggtgactgtgactgt
ggggagtgcaggtgctacagtggatggactggtgaatactgtaattgcacaactgatacc
agcacctgcattgctgaggatgggacactgtgcagtgggagaggtgaatgcatctgtggg
acatgtgcttgcacccatccaggggcttcgggccaaacatgtgaaaaatgccctctctgc
ggtgacccctgcagctccagatggagctgtgtagaatgtcacttggcttctgatgacaag
tcactgggagattgcagtgaaaaatgcaaattggttgatgcaactgtcagtgtggcaaag
gattattcagaggataaatccatttcctgctctttgcagggggaaaatgaatgtataacc
acatttctactgtctgtggatgaacagggaaggacagtcattcacagcatagaacggaaa
gactgtgcacagcatccaaatatcccaatgatagtggtgggtgtcacccttgctatcctt
ctcattggcattgttttactttgcatatggaaattactggtgtcacttcaagaccgaaaa
gaggtggccaaatttgaagcagaaaaatcaaaagttaaatggcaaacggaaacaaatcca
ctgtacagaggctcaacaaccacttttaaaaatgtgacttacaagaaccaagatatgcat
aaaagacccatggctgcagatttctattag
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