Lonchura striata (white-rumped munia): 110469658
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Entry
110469658 CDS
T05897
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110469658
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110469658
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
ATP-synt_B
IQ
Motif
Other DBs
NCBI-GeneID:
110469658
NCBI-ProteinID:
XP_021384284
LinkDB
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Position
7:20106455..20164065
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AA seq
1816 aa
AA seq
DB search
MAQALLVPPGPESFRYFTRDSLAAIEKRSAEEKAKKPKQEHTDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINIISYFNSTM
NENGTFVNMTVSTFNWKDYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQTTAAVAAASVASRDFSGVG
GLGELLESSSEASKLSSKSAKERRNRRKKRRQKEMSEAEDKGDTDKFPKSESEDSIRRKG
FRFSAEGSQLTYEKRLTSPHQSLLSIRGSLFSPRRNSKTSIFSFRGHAKDVGSENDFADD
EHSTLEDNESRRDSLFVPNRHGERRNSNVSQASVSSRMIPALPVNGKMHSTVDCNGVVSL
VGGPSTLTSPTGQLIPEGTTTETEIRKRRLSSYQISMEMLEESAARQRAMSIASILTNTM
EELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLF
MAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSL
MELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKISSDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGID
YVKKKIQEFIRKAFVRKQKSLEEIKALEELNNKKDSCISNHTAVEINKDLNYLKDGNGTT
SGVGTGSSVEKYIIDENDYMSFINNPGLTVTVPIALGESDFENLNTEEFSSESDMEESKQ
KLNASSSSEGSTVDIAPPGEGEQAEIESEEALEPEACFTEGCVQKFPCCQVSIEDGKGKT
WWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIF
ILEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGE
MFDISDVNNYTQCVELIKSNQSARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDVKDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPVNKFQGMIFDFVTKQVFDISIMILICLNMVTMMVETD
DQSKEMETILSRINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAE
MIEKYFVSPTLFRVIRLARIGRILQPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGE
SGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQRAYRRHLLRLKVKQV
SSIYNKNKNKEGDGHIIKEIIIDKLKGNSTPEKTDESSSTTSPPSYDSVTKPDKEKYEKD
KAEKNYKGKNIRENKK
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtaccacctggacctgaaagcttccgctattttactagagat
tccctcgcagctattgaaaagcgttctgcagaagaaaaagctaaaaagcccaagcaagaa
catacagatgatgatgatgaaaatggtccaaaaccaaacagtgacttggaggcaggaaag
acactgccatttatttatggtgacatacctccaggaatggtatctgaacctttggaagac
ctggacccatattatatcaataaaaaaactttcatagtattgaataaggggaaagcaatt
ttccggttcagtgccacgtctgccttgtatattttaaccccttttaatcccatcagaaaa
attgctatcaagattttggtacattcgttattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtac
actttcactggaatttatacctttgaatcacttatcaaaattcttgcaaggggcttctgc
ttagaaggttttacttttctgcgagacccatggaactggcttgacttcagtgtcatttta
atggcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctgaagactattgtaggagcc
ctgattcagtctgtgaagaagctctcggatgtgatgatcctgactgtgttttgtctgagt
gtatttgcactgatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcag
tggcctccagacaattctacttttgagataaacattatttcctactttaacagcacaatg
aatgaaaacggtacttttgttaacatgacagtgagcacgtttaactggaaggattacatc
gaggatgaaactcatttttatattttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcagggcaatgtccagaaggatatatatgtgtgaaagctggcagaaacccc
aattacggctacacaagttttgacaccttcagttgggcttttttgtcactgtttcggcta
atgactcaggacttctgggaaaatctctatcagctgacactgcgtgctgctgggaagaca
tacatgatattttttgttctggtgatttttctgggctctttctatctgataaacctgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaacaatggaagaagctgag
cagaaagaggcagaatttcaacagatgcttgaacaactgaagaagcaacaagaagaagct
cagacaacagcagcagtagcagcagcatcagttgcatcaagagatttcagtggtgtaggg
ggattaggagaactcctggaaagctcttcagaagcatcaaagttgagctcaaagagtgct
aaagaaagaagaaacagaaggaagaaaagaagacagaaagaaatgtctgaagcagaggac
aaaggagatactgataagttccccaagtctgagtcagaagacagtatcagaaggaaaggt
ttccgcttctccgcagaaggaagtcaactgacatatgaaaaaaggctcacttctcctcac
cagtctttgttaagcattcgtggttctctgttctcaccaagacgcaacagcaaaaccagc
attttcagtttcagaggtcacgcaaaggatgtaggctctgaaaatgactttgctgatgat
gagcacagcactcttgaagacaatgagagcagaagagattctctctttgttccaaatcga
catggagaaaggcgcaacagtaacgttagccaggccagtgtgtcatctagaatgatacca
gcccttccagtgaatgggaagatgcacagcactgtggattgtaacggagtggtttccttg
gttggaggaccttcaactctaacttcacctactggtcagcttataccagagggcaccact
acagaaacagaaataaggaaaagaagactgagttcataccaaatttccatggaaatgctg
gaagagtctgctgcaagacaaagagcaatgagcatagccagcatacttacaaatacaatg
gaagagcttgaagaatccagacagaaatgcccaccatgctggtacagatttgcaaatact
tttttgatctgggattgctggagtccatggttaaaagtaaagcatgtcgtcaatttagtt
gtgatggatccatttgttgatcttgctataactatttgcattgttttaaataccttgttt
atggccatggaacattacccaatgacagaacagtttagcagtgtcctttctgtggggaac
ctggtattcactgggatatttacagcagaaatggtactaaagattattgccatggaccct
tattattatttccaagaaggctggaatatttttgatggtattatcgttagccttagttta
atggagcttggtcttgcaaatgttgaaggattatctgttcttcgctcattcagactgctt
cgagttttcaaattggcaaaatcttggccaaccctaaatatgctaattaagattattggc
aactcagtgggagctctggggaatctgaccctggtgctggccatcattgtgttcattttt
gctgtggttgggatgcagctcttcgggaagagctacaaggaatgtgtctgcaagatctcc
agtgactgtgtgctccctcgctggcacatgcatgactttttccactctttcctgattgta
ttccgagtgctgtgtggagaatggatagaaaccatgtgggactgcatggaggttgcaggc
caaaccatgtgccttattgttttcatgctggtcatggtgattggaaacctagtggtattg
aacctatttctggccttgctgctgagctcatttagttcagacaaccttgctgctaccgac
gatgataatgaaatgaacaatctccagattgctgtggcaaggattcagaaaggcatagat
tatgttaaaaaaaagatacaggagttcatccgaaaagcctttgttagaaagcagaaatct
ttagaagaaatcaaggcacttgaagagctaaacaacaagaaagacagctgcatttccaat
catactgccgttgaaataaacaaagatctgaattatctcaaagacgggaatggaaccacc
agtggtgtaggcacaggcagcagtgtggaaaaatacataattgatgaaaatgattacatg
tcattcataaacaacccaggcctcactgtgacagtgcccattgcacttggagaatcagat
tttgaaaatttaaatacagaagaatttagcagtgaatctgatatggaagaaagcaaacag
aaactaaatgcatcaagctcatcagaaggcagcactgttgatattgctcctcctggagag
ggcgagcaagcagaaattgaaagtgaagaagctcttgaaccagaagcctgttttactgaa
ggttgtgtgcagaaatttccatgttgtcaagtaagtatagaagatggcaaaggaaaaact
tggtggaatcttagaaaaacctgctacagcatagttgaacacaactggtttgagactttc
attgtattcatgattctcctcagcagtggagcactagcttttgaagatatatatatcgaa
caacgcaaaactatcaagaccatgctggaatacgctgacaaagtttttacatatattttc
attttggaaatgcttttaaaatgggtagcatatggttttcaaatatattttactaatgcc
tggtgctggctggatttcctgattgttgatgtctcattggttagtttaatagccaatgct
ctgggctattctgaacttggtgccattaaatcactacggacattaagagctttaagacct
ttaagagccttgtcacgatttgaaggaatgagggtggttgtaaatgcccttgtaggagca
atcccgtctatcatgaatgtattgctggtatgtcttatattctggctaatcttcagcatc
atgggagtaaatctttttgctggaaaattctatcactgtgtcaacaccacaactggtgag
atgtttgatatcagtgatgtgaacaattatactcagtgtgtggaactcataaaaagcaat
caaagtgcccgatggaagaatgtgaaagtaaactttgataatgtaggagctggatatctt
gctctgcttcaagtagctactttcaaaggatggatggatattatgtatgctgctgttgat
tcgcgagatgtaaaagatcaacctaagtatgaggacaacttatatatgtatctctatttt
gtcatctttatcatatttggatcattttttaccttgaaccttttcattggtgttattata
gacaacttcaaccaacaaaaaaagaagtttggaggtcaagatatatttatgacagaagaa
cagaagaaatattataatgcaatgaaaaaactgggatccaaaaagccacagaaacctata
ccgaggccagtgaataaattccaaggcatgatctttgattttgtaaccaaacaagtattt
gacatcagcatcatgatactcatctgccttaacatggtcacaatgatggtagaaacagac
gaccagagtaaagaaatggaaacaattttatcccggattaacctggtgttcattgtcctt
ttcactggagaatttgttttgaaattgatttcacttcgccattactacttcactataggc
tggaatatttttgattttgtggttgtgattctctccatagtaggtatgtttttggctgag
atgatcgagaagtactttgtatctcccacactattcagagtcatccggcttgccagaatc
ggtcgaatcctgcaaccaaacaaagtccagctgattgcaatggatctgcccatggtgagt
ggtgacagaattcactgccttgacatcttgtttgctttcacaaagcgtgttttgggggaa
agtggggagatggacgccctcagaatacagatggaagatcggtttatggcagccaatcct
tccaaagtctcctatgaaccaattacaaccacactgaaacgaaagcaggaggaagtgtct
gctgtcatcattcagcgtgcttacagacgtcacctcttaaggctaaaagttaaacaggtg
tctagtatatataataaaaataaaaacaaagaaggagatggacacattataaaagagata
attattgataaactaaaaggaaactccaccccagaaaaaacagatgagagttcttctaca
acttccccaccttcttatgacagtgtaacaaagccagacaaagaaaaatatgaaaaagat
aaagcagaaaagaactacaaaggtaaaaacatcagggaaaataaaaaataa
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