Lonchura striata (white-rumped munia): 110470536
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Entry
110470536 CDS
T05897
Symbol
NALCN
Name
(RefSeq) sodium leak channel NALCN isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110470536 (NALCN)
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
110470536 (NALCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
FAM165
Motif
Other DBs
NCBI-GeneID:
110470536
NCBI-ProteinID:
XP_021385919
LinkDB
All DBs
Position
1:38480610..38709407
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AA seq
1762 aa
AA seq
DB search
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPKT
FEHYPPLQYVTFALDTLLMFLYTAEMIAKMHIRGIVKGDSSYVKDRWCVFDGFMVFCLWV
SLVLQVFEIAEIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVTDDTQPGNVTWNNLAIPDTHCSRELEEGYQCP
PGFKCMDLEDLGLSRQELGYSGFNEIGTSIFTVYEAASQEGWVFLMYRAIDSFPRWRSYF
YFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATTQMFHEDAAGGWQ
LVAVDVNKPQGRAPACLQKMMRSSVFHMFILSMVAVDVIVAASNYYKGENFKRQYDEFYL
AEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHIYPDLYHSQFTYFQVL
RVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTF
PRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILD
NLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRE
SFMKQFIDRQQQDTTCLLRRLPSASSSSCDHSKRSAIEENRYIDQKGNQSTFLPCNEEMN
KDLKVVSATQLRKSVFSIRARNLLEKETAINKILRACTRQRMLSGSFEGQPAKERSILSV
QHHIRQERRSLRHGSNSQRISRGKSLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAE
MKRKVQEEELRENHPYFDKPLFIVGREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYH
QLYDLLGLVTYLDWVMIIVTICSCISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLK
IMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWMPQNVPAKSGAQLLMVLRCLRPLRI
FKLVPQMRKVVRELFSGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPHIISRED
CHGIFRINVSVSKNLNLKLRPGEKKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKG
WVEVRDVIIHRVGPIHGIYIHVFVFLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWE
DLKSRLKIAQPLHLPPRPDNDGFRAKMYDITQHPFFKRTIAVLVLAQSVLLSVKWDAADP
VTVPLATMSVVFTFIFVLEVTMKIIAMSPSGFWQSRRNRYDLLVTSLGVIWVILHFALLN
AYTYMMGACVIVFRFFSICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVL
FGTVKYGENINRHANFSSAGKAITVLFRIVTGEDWNKIMHDCMVQPPFCTPDNSTYWKTD
CGNYAGALMYFCSFYVIIAYIMLNLLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNM
VDDKREGVIPTFRVKFLLRLLRGRLEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSM
LSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHS
LRESQQQELSRFLNPPSIETTQPSEDMNALNQENSAQPETSSQQQLLSPTLSDRGGYRQD
AGDAGKPQRKFGQWRLPSAPKPISHSVSSVNLRFGGRSTMKSVACKMNPMSDAASCGSEV
KKWWTRQLTVESDESGEDLLDI
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaggaaacagagttcaagggtggaagcccagccagttacggattttggtccc
gatgaatctttgtcagacaatgcagatattctatggattaacaaaccatgggtgcactct
ttactaagaatttgtgccatcatcagtgttatttctgtgtgtatgaacactccaaaaacc
ttcgagcattatccgcctctccagtatgtgacatttgctcttgatactctgttgatgttt
ctttacactgcagagatgatagcaaaaatgcatattcgtgggatagttaagggtgatagc
tcctacgtaaaagatcgttggtgtgtgtttgatggatttatggtcttttgtctttgggtg
tcactggttttgcaggtgtttgaaatagctgaaatagttgaccaaatgtcaccttggggc
atgttacggattccacgaccactcattatgattcgagcattccgaatatattttcgtttt
gagctgccaaggactaggataacaaatatcttgaagcgttctggagagcaaatatggagc
gtttcaatattccttctgttctttcttctcctgtatgggatcctgggagtgcagatgttt
ggaacttttacatatcactgtgtgactgatgacacgcagccaggaaatgtaacctggaat
aatttagctatcccagacacccactgttccagagagctagaagaaggttaccagtgccca
cctggatttaaatgcatggaccttgaagatctgggactaagcaggcaagagctgggctac
agtggctttaatgagataggcacaagtatatttactgtttatgaagctgcttcccaggaa
ggctgggtgttccttatgtatcgagcaattgacagttttccccgatggcgttcatatttc
tatttcatcaccttaattttctttctggcctggcttgttaagaatgtttttattgcagtc
atcattgaaacgtttgcagaaattagagtgcagttccagcagatgtgggggtccaggagc
agtactacttcaactgccaccacccagatgtttcatgaagatgctgctggaggttggcag
cttgtggctgttgatgtgaataaaccccaaggcagagctcctgcatgtctacagaaaatg
atgagatcatctgtatttcatatgttcatactaagtatggttgctgtcgatgtgattgtt
gctgctagcaactactataaaggagaaaatttcaagagacaatatgatgaattttacctt
gctgaggttgcttttacagttctgtttgatttagaagctctactgaagatctggtgtttg
ggtttcacaggatacatcagctcatctcttcacaagtttgagttgctgcttgtaattgga
accactctccatatttatccagatctctatcactctcaatttacatattttcaggttctc
agagtagttcgacttataaagatatctcctgctttggaggattttgtgtataagatattt
ggaccaggaaaaaaacttgggagtttggtagtatttactgccagccttttgatcgtaatg
tcagcaatcagtttacagatgttttgctttgtggaagaactggatagatttacaaccttt
ccaagggcattcatgtcaatgtttcagattctcacacaggaagggtgggtcgatgttatg
gatcagacactgaatgctgtaggacatatgtgggcaccagtggttgctatttattttata
ctatatcatctttttgctactctgattctactcagcttgtttgttgctgttattttggac
aacttggaacttgatgaagatctaaagaaacttaaacaactaaagcaaagtgaagctaat
gcagatacaaaggagaagcttcccttgcgcctacgcatctttgaaaaatttccaaacagg
ccacaaatggtgaaaatctcgaagcttccttcagattttacagttccaaaaataagggaa
agttttatgaagcagtttattgatcgccagcaacaagataccacctgtttgctgcgaaga
cttccttcagcatcttcttcctcatgtgaccactctaaaagatcagcaattgaagaaaat
agatatattgatcaaaagggtaatcagagtacatttctaccatgtaatgaagagatgaac
aaagaccttaaagttgtctcagccacacagctccgcaaatctgttttcagcatcagagca
agaaaccttctggaaaaagagacagcaatcaataaaattctaagggcctgcactagacag
cgcatgctgagtggatcatttgaggggcagccagcaaaggaaaggtcaatacttagtgtc
cagcatcatatacgacaagaacgcaggtcactgagacatggttcaaacagccagagaatc
agcagaggaaaatctcttgaaacattgactcaagatcattccaacacagtgagatacaga
aatgcacagagagaagacagtgagataaagatgatccaagagaaaaaggaacaagcagaa
atgaaaaggaaagtccaggaggaggagctgcgagagaatcacccgtatttcgataaaccc
cttttcatagttggccgtgagcacagattcaggaacttctgccgagtggtggtacgggct
cgctttaatgcttctaaaacagatcctgttactggagctgtgaaaaataccaaataccat
cagctttatgacttgctgggtttggttacttacctggactgggtcatgatcattgttacg
atatgctcctgcatttccatgatgtttgaatccccttttagaagagttatgcatgctcca
acactccagattgctgaatatgtttttgtaatattcatgagcattgagcttaatctgaag
attatggcagatggcttgttctttactccaacagctgtcattagggactttggaggagtt
atggacatatttatatatcttgtgagtttgatattcctgtgctggatgcctcagaatgtc
cctgccaaatccggagctcagctcttaatggtgctccgctgcctccgacctcttcgaatt
ttcaaactggtccctcagatgaggaaagtggtgcgagagctgtttagtggcttcaaggaa
atttttttggtttctattcttttgctgacgttaatgcttgtttttgcaagctttggagtg
cagctgtttgctggaaaactggctaaatgcaatgaccctcacatcatctctagggaggat
tgtcatggcatctttagaataaatgtaagtgtttccaaaaatctcaatttaaagttaaga
cctggagagaaaaagcctggattttgggtgccacgagtctgggcaaatcctcggaatttt
aattttgataatgtgggcaatgcaatgctggcactatttgaagttctgtccttaaaaggc
tgggtggaagtcagagatgttatcattcatcgtgttgggccgatccatggaatctacatc
cacgtttttgtattccttggctgcatgattggactgaccctttttgttggagttgtcatc
gctaattttaatgaaaacaaggggacagctttactgacggtagatcagagacgatgggaa
gatctgaaaagcagactgaagatagcacaacctcttcatctcccacctcgtccggataac
gatggctttagagcaaagatgtatgatataactcagcatccattttttaagagaactatt
gctgtacttgttcttgcccagtctgtgttgttatcagttaagtgggatgctgcagatcca
gtaactgtgcctttagcaacaatgtctgttgttttcaccttcatttttgtccttgaggtc
acaatgaagattattgccatgtcaccttctggcttctggcaaagcagaagaaaccggtat
gatctcttggtgacatctcttggagttatatgggtcatacttcactttgccttactgaat
gcatacacatacatgatgggggcatgtgtaattgtcttcaggtttttctccatttgtggg
aagcatgtaacactaaaaatgcttctcctgactgtggttgtcagcatgtacaagagtttc
ttcatcatagtgggcatgttcttactgcttctttgttatgcttttgctggagtggtgtta
tttggtacagtgaaatacggagagaacattaacagacatgcaaatttttcatcagctggc
aaggctattactgtactcttcagaatagttactggagaagactggaacaaaattatgcac
gactgcatggttcagcctccattttgtacaccagataacagcacctactggaaaacagac
tgtggaaattatgctggtgcccttatgtatttctgctctttctatgtcatcattgcatac
atcatgttaaatttgcttgttgctatcattgtggagaatttctcattgttttactcaact
gaagaagatcagcttttaagttataatgacctaaggcattttcaaattatatggaacatg
gttgatgacaaaagagagggtgtaatccctaccttccgagtgaaattcctgctgaggctt
ctgcgaggcaggctggaggtggatcttgacaaggacaagctgctgttcaagcacatgtgc
tatgaaatggagcggctccacaatggtggcgatgtcacttttcatgacgtcctcagcatg
ctttcatataggtctgttgatatcagaaaaagtcttcaactggaagagctgcttgccagg
gagcaactggaatataccatagaagaggaggtggccaaacaaaccatacgaatgtggctg
aaaaagtgcttaaagcgaatcagagcaaaacagcagcagtcgtgcagcattatccatagc
ctacgagaaagccaacagcaggagttgagccgatttctgaatcctcccagcattgagaca
acacagccaagtgaagatatgaatgctcttaatcaagagaacagtgcacagccagagaca
agtagccagcagcagctccttagcccaacactttctgacagaggtggctatagacaagac
gctggagatgctgggaaacctcagcggaaatttggacaatggcgcttgccatcagccccc
aaaccaataagccattcagtgtcttcagtcaacctccgttttggtggacgttcaactatg
aaatctgttgcatgcaaaatgaatcccatgtctgatgctgcttcctgtggatcagaagtc
aagaaatggtggacaagacaattaactgtggagagtgatgagagtggagaagaccttctt
gatatctga
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