Lonchura striata (white-rumped munia): 110476235
Help
Entry
110476235 CDS
T05897
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
110476235 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110476235 (CNGB1)
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110476235 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
110476235
NCBI-ProteinID:
XP_031361742
LinkDB
All DBs
Position
11:6578509..6599203
Genome browser
AA seq
1169 aa
AA seq
DB search
MAWAHRAELQAEARSLPTIQEEPQEEETRKLSPSHQDRGGKKKEKKEEEEEEERRKEEEE
MKQEEEDRKEEEEERQKKEEDRKKEEEMKQEEEDKKKEEEEWKNEEEGRKKEEEERKTEE
ENREKEEEERKVEEEEDSKKEEEGRKKEEEEERKEEEDRKKEEEERKEELKKKEEKRKKE
KERKKDKEKKKEEKGKEEDTKEEEQEESAEPLLQPPCLPAEEGVDEACLAQEALRLEQLE
EAEISNLEGALVQVRPRSLLGLPAMSSCCPASAGAQGFSKRDSRLGWAQDVSPSLEGTAE
VAVAGGKAPFTLQGGRKRRQLKLMLKQAAGSMARRARDVELHQLVQDKPGAGRDPSPAGC
GARELLPNVPNVPNVPNVPNVPNVPSSRAPAAARAPRPGASKPKAGLVNPNFCTEEQSPL
GDSPSVEMEDGDSPGRAVEIQGRHGALPAPELLAVPGAASPRRKRLLPEDALDKGLVSQS
PSRVLGWEEEQRESPPGRCGSASSLSSAAISSRLQELVRLFKERTEKVKEKLIDSDVTSD
DESPVASPTKPAPAAALVPAPGELQGDKPLGDDHYCEMLCCTFKHQPWLDRLKSYKFPSS
IDPLTNLMYVLWLFFVVMAWNWNCWLIPVRWAFPYQTPANIHYWLLVDYLCDLIYLLDIL
IFQTRLQFVQGGDIITDKKAMKENYLRSQRFKMDVLCLLPLDFFYFKVGVNPLLRFPRCL
KYMAFFEFNSRLEAILTKAYIYRVIRTTAYLLYSLHVNSCLYYWASAYEGLGSTTWVYDG
EGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQLLNYFTGVFAFSVMIGQMRDVVGAAT
AGQTYYRSCMDSTIKYMNFYRIPRTVQNRVKTWYEYTWHSQGMLDESELLVQLPDKMRLD
IAIDVNYNIVSKVALFQGCDRQMIFDMLKRLKSVVYLPNDYVCKKGEIGREMYIIQAGQV
QVLGGPDGKSVLVTLKAGSVFGEISLLAAGGGNRRTANVVAHGFANLFILEKKDLNEILV
HYPESQKLLRKKAKKMLRSSNKPKDEKGGPGDPLIIPPKADTPKLFRAALAATGRMGGKG
PLGRLRWRLKELQAMQEAQGSSVSPTPPKSPVHHRSPVTAHRAQTRLGEEISSESPDHSV
TIRVISTAKEDEEILAAEISEKDEKKEEQ
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggctcacagggctgagctgcaggcagaggctcgttcccttcccaccatacag
gaggaacctcaggaagaagaaaccagaaaattgtcaccatcacaccaggacagggggggc
aagaagaaggagaagaaggaggaggaggaggaggaggaaaggagaaaagaggaagaggag
atgaagcaagaagaggaggacaggaaagaggaggaagaagagaggcagaaaaaggaagag
gacaggaaaaaggaggaggagatgaagcaagaggaggaggacaagaaaaaagaggaagag
gagtggaagaacgaggaagagggcaggaaaaaggaggaagaggagagaaagacagaggag
gagaacagggaaaaggaggaagaggagaggaaggtagaggaggaggaggacagtaaaaaa
gaggaagagggcaggaaaaaagaggaggaagaggagaggaaggaggaggaggacaggaag
aaagaggaagaggagaggaaggaagagttgaagaagaaagaggagaagaggaagaaagag
aaggagaggaaaaaagacaaggagaagaagaaagaggaaaaggggaaagaggaagatacg
aaagaggaggagcaggaggagagtgcagaacccctgctgcagcctccttgtctccccgct
gaggagggtgtggatgaagcctgccttgcccaggaggccctcaggcttgagcagctggag
gaagctgagataagtaatctggaaggtgcccttgtgcaggtacggccccgctccctgctt
gggctccctgcaatgagctcttgctgccctgcaagtgctggggctcagggcttctccaag
agggacagcaggctgggctgggcacaggacgtgtccccatccctggaggggacagcagaa
gtagctgtggctggagggaaggctcctttcaccctacagggtgggcggaagaggagacag
ctgaagctgatgctgaagcaggctgctggcagcatggccaggcgggcccgggacgtcgag
ctgcaccagctggtgcaggacaagccaggggctggcagggacccctcccctgccggctgc
ggggctcgggagctgctccccaatgtccccaatgtccccaatgtccccaatgtccccaat
gtccccaatgtccccagctcccgagcccccgctgccgcccgcgccccccgccctggcgcc
agcaagccaaaggctggacttgtcaaccccaatttttgcactgaggagcaatccccacta
ggagactcccccagcgtggagatggaggatggggacagcccaggccgagctgtggagatc
cagggcaggcacggagcgctgccagcccccgagctgctggcggtgcccggcgcagcttcc
cccaggaggaagcgactgctcccagaggatgctctggacaaggggctggtgagtcaatcc
cccagcagagtgctgggctgggaggaggagcagagggaaagcccgcccgggcgctgcggc
tcggcctccagcctgagcagcgccgccatcagcagccggctccaggagctggtgaggctc
ttcaaggagaggactgagaaggtgaaggagaagctgattgactccgatgtcacctcggat
gatgagagccctgtggcatctcccaccaagccagcacctgcagcagcactggtgcctgcc
ccaggggagctgcagggggacaaacctttgggggatgaccactactgcgagatgctgtgc
tgcacgttcaagcaccagccctggctggaccgcctgaaaagctacaaattccccagcagc
atcgaccccctcaccaatctgatgtacgtgctgtggctgttcttcgttgtcatggcctgg
aactggaactgctggttgatccctgtccgctgggctttcccctaccagactccagcaaac
atccactactggctgctggtggattacctctgtgacctcatttatctgctggacatcctc
atctttcagacccgcctgcagttcgtgcaggggggagacatcatcactgacaaaaaggcc
atgaaagagaactacctgcgatcacaacgcttcaagatggatgtgctgtgcctcctgccc
ctggatttcttctacttcaaagtgggtgtcaaccccctcctgcgcttccctcgctgtctg
aagtacatggccttctttgagttcaacagccgcctggaggccatcctgaccaaggcatac
atctacagggtgattcggaccactgcctacttactgtacagcctgcacgtgaactcctgc
ctctactactgggcctcagcctacgaagggctgggctccaccacctgggtctatgatggg
gaaggaaacagctacatccgctgttactactgggcagtgaaaaccctcatcaccatcggg
ggcctgccagaccccaagaccctgtttgagatcgtcttccagctgctgaactacttcaca
ggcgtctttgctttctctgtcatgatagggcagatgagagatgtggttggtgctgctact
gcaggacaaacttactatcggagctgcatggacagcaccattaaatacatgaacttctac
aggatccccaggacagttcagaacagggtgaagacgtggtacgagtacacgtggcactcc
caaggcatgctagatgagtcagagctgctggtgcagctgccagacaagatgaggctggac
attgccatcgacgtgaactacaacatcgtgagcaaagtggcccttttccagggctgtgac
agacagatgatctttgacatgctgaagcggctcaaatcagtggtctacctgcccaatgac
tacgtgtgcaagaagggagaaataggccgtgagatgtacatcatccaagcgggacaagtg
caggtgctggggggacctgatggcaaatccgtgctggtgactctgaaagctggatctgtc
tttggggaaatcagcttgctggcagcaggagggggaaatcgccgaacagcgaacgtcgtg
gcccacggcttcgccaacctttttattttggagaagaaagacttgaacgagattttggtg
cattacccggagtctcagaagctgctgcgtaagaaagccaagaaaatgctgagaagcagc
aacaagcccaaagatgagaaaggaggccccggagatcccctgatcatccccccgaaagcc
gacacccccaagctgttcagggctgccctggcggccacagggaggatggggggcaagggg
cccctggggcggctccgctggaggctgaaggagctgcaggcgatgcaggaggcgcagggt
tccagtgtcagcccaacaccaccaaaatcaccagtgcaccacagatcgcctgtcacagcc
cacagagcacaaacacgcctgggagaggaaatatcctcagaatctcctgatcattcagtc
accattcgtgtgatttccacagcaaaagaagatgaggaaatccttgctgctgagatttca
gagaaagatgaaaaaaaagaagagcaatga
DBGET
integrated database retrieval system
