KEGG   Lonchura striata (white-rumped munia): 110478839
Entry
110478839         CDS       T05897                                 
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr04141  Protein processing in endoplasmic reticulum
lsr04210  Apoptosis
lsr04217  Necroptosis
lsr04218  Cellular senescence
lsr04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110478839 (CAPN1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    110478839 (CAPN1)
   04217 Necroptosis
    110478839 (CAPN1)
   04218 Cellular senescence
    110478839 (CAPN1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    110478839 (CAPN1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lsr01002]
    110478839 (CAPN1)
Enzymes [BR:lsr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     110478839 (CAPN1)
Peptidases and inhibitors [BR:lsr01002]
 Cysteine peptidases
  Family C2: calpain family
   110478839 (CAPN1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 CAPN13-like_C_EFh DUF6009
Other DBs
NCBI-GeneID: 110478839
NCBI-ProteinID: XP_031363425
LinkDB
Position
Unknown
AA seq 742 aa
MAEPPVVPVFCTGVSAQVRRQRAKELGLGRHDNAVRYLGQDFGQLAEECRRSGTLFRDPS
FPPAAASLGFRELGPGSSKTRGVQWKRPTVSPAPSPRPPKSPVGAREHSLISAFPQELCP
RPQFIVDGATRTDICQGALGDCWLLAAIASLTLNETLLHRVVPHGQSFQQGYAGIFHFQI
WQFGEWLDVVVDDFLPTKDGKLLFVHSAEGSEFWSALLEKAYAKVNGCYEALSGGSTSEG
FEDFTGGVTEWFDLRRPPADLYQIILKALERGSLLGCSIDITSAFDMEAVTFKKLVKGHA
YSVTGAKQIPYRGQALELIRMRNPWGEVEWTGAWSDGSAEWHAVEPALRQQLMVKMEDGE
FWMSFRDFLREFTRLEICNLTPDALQSRKFRKWNTRLYDGTWRRGSTAGGCRNYPATFWI
NPQFKIQLEEVDDDRDEDGGREPGCSFLLALMQKHRRRERRYGKDMETIGFAVYEVPPEY
VGRSGVHLKREFFLANASRARSEQFINLREVSTRFRLPPGEYIVVPSTFEPNKEGDFVLR
VFSEKRAGTEEMDDKIQATLPDEKVLGESEIDENFKQLFRQLAGPDLEISVTELQTILNR
IIAKHKDLRTKGFSIESCRSMVNLMDKDGNGKLGLVEFNVLWNRIRNYLSIFRKFDLDKS
GSISAYELRLALEAAGYRLSKRLHELLITRYAEPDLALDFDSFVCCLVRLETMFRFFQAM
DVDKDGVVTFDLLQWLQLTMFA
NT seq 2229 nt   +upstreamnt  +downstreamnt
atggcggagccgcccgtggtgccggtgttctgcaccggcgtctcggcgcaggtgcggcgc
cagcgggccaaggagctggggctgggccggcacgacaacgccgtgcgctacctgggccag
gatttcgggcagctggccgaggagtgccggcgctccgggaccctgttccgggacccctcc
ttccccccggccgccgcctccctcggcttccgcgagctgggccccggctcctccaaaacg
cgcggcgtgcagtggaagaggcccacggtgagcccggctccgtccccgcgccccccgaaa
agtcccgtgggagcgcgggagcattccctgatttcggctttcccgcaggagctgtgcccg
cgcccgcagttcatcgtggacggcgccacgcgcaccgacatctgccagggagcgctgggt
gactgttggctgctggcggccatcgcctcgctgacgctcaacgagaccctcctgcaccgc
gtggtgccgcacgggcagagcttccagcagggctacgccggcatcttccacttccagatc
tggcagtttggcgagtggctggacgtggtggtggacgatttcctgcccaccaaggacggg
aagctgctcttcgtgcactcggccgagggctccgagttctggagcgcgctgctggaaaag
gcctatgccaaggtgaacggctgctacgaggcgctgtcgggcggcagcacctccgagggc
ttcgaggacttcacgggcggcgtcaccgagtggttcgacctgcgccggcccccggccgac
ctctaccagatcatcctcaaggcgctggagcgcggctccctgctcggctgctccatcgac
ataaccagcgccttcgacatggaggcggtgaccttcaagaagctggtgaagggccacgcc
tactcggtgactggcgccaagcagatcccgtaccgcgggcaggccctggagctgatccgg
atgcgcaatccctggggagaggtggagtggacgggcgcctggagcgacggctcggccgag
tggcacgcggtggagccagcgctgcgccagcagctcatggtcaagatggaggatggggaa
ttctggatgtccttccgggatttcctgcgggaattcacccgcctggagatctgcaacctc
accccggacgcgctgcagtcccgcaagttccgcaagtggaacacgcggctctacgacggg
acgtggcggcgcggcagcaccgccggcggctgccgcaactaccccgccacgttctggatc
aacccccagttcaagatccagctggaggaggtggacgatgaccgggacgaggacggcggg
cgggagccgggctgcagcttcctgctggcgctgatgcagaagcaccggcgccgcgagcgc
cgctacggcaaggacatggagaccattggcttcgctgtctatgaggtccctcccgagtac
gtggggaggtcgggcgtgcacctgaagcgggagttcttcctggccaacgcctcgcgcgcg
cgctccgagcagttcatcaacctgcgcgaggtgagcacgcgcttccggctgccgcccggc
gagtacatcgtggtgccctccaccttcgagcccaacaaggagggcgacttcgtgctccgc
gtcttctccgagaagagagccggcaccgaggagatggacgacaagatccaggccacgctg
ccggacgagaaagtgctgggcgagagcgaaatcgatgagaacttcaagcagctcttcagg
cagctggcggggccggacctggagatcagcgtcaccgagctgcagaccatcctcaaccgc
atcatcgccaaacacaaagacctgcgcaccaagggcttcagcatcgagtcctgccgcagc
atggtgaacctgatggacaaagacgggaacgggaaactgggcctggtggagttcaacgtc
ctctggaaccggatccgcaactacctgagcatcttccgcaagtttgacctggacaagtca
ggctccatcagtgcctacgagctgcgcctggcgctggaggctgcaggctaccggctgagc
aagaggctgcacgagctgctcatcacccgctacgccgagcccgacctggccctggacttc
gacagcttcgtctgctgcctcgtgcgcctggagaccatgttccggtttttccaggccatg
gacgtggacaaggacggcgtcgtcaccttcgacctgctgcagtggctccagctcaccatg
ttcgcctga

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