Lonchura striata (white-rumped munia): 110481525
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Entry
110481525 CDS
T05897
Symbol
CACNA1A
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04010
MAPK signaling pathway
lsr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110481525 (CACNA1A)
04020 Calcium signaling pathway
110481525 (CACNA1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110481525 (CACNA1A)
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110481525 (CACNA1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
110481525
NCBI-ProteinID:
XP_021405895
LinkDB
All DBs
Position
Unknown
AA seq
2329 aa
AA seq
DB search
MARFGEEVAARYGPGGGGSGPGAAAGGRGAAGGGPRQGPPGAQRLYKQSMAQRARTMALY
NPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLP
DEDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGIL
ASVGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAI
IGLEFYMGKFHTTCFDLVTDEIKVEVPCGTDEPARICPNGTKCKKYWEGPNYGITQFDNI
LFAVLTVFQCITMEGWTDLLYYVRAGPSRCPPFPSRCPPDYAEFIFLGLFMSEMFIKMYG
LGTRPYFHSSFNCFDCAVIIGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYWASL
RNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDDGTPPTNFDTFPAAIMT
VFQILTGEDWNAVMYDGIKSQGGVKGGMVFSVYFIVLTLFGNYTLLNVFLAIAVDNLANA
QELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSVTMKEQQKNQKSSKSVWEQRTS
ELRKQNLLASREALYSELDPEERWKVPYARHLRPDMKTHLDRPLVVDPQENRNNNTNKTR
PGEPPGEPRFGPLRAEELRRQQPPRYPEHGGGPRPAEPPAGPPGGRRPRSSSRDPEREPS
QERGYGDGERPKGRHRSRDGRAGSPPEREHRRHRGHRRGPEEGEEGARPERRPRHREGGR
PPRGEGDGEHGDGERRRRHRHGPPPGYDGEGRRDDKERRHRRRRETQPPPAPSGPTLSTT
RPIQQDLGRRDPPVAEDIDNMKNNKLATAEPPAPPSVGNHTPCPPAGPPRRPPPTANPPP
PENSLVVTNPGPPNNPSKAGGKPEHTAVDIPPPFPPPPSNALVQVNRNANPEPLPRKEEE
EKKEEEGDGQDENGPKPMVPYSSMFILSTTNPFRRLCHYIVNLRYFEMCILMVIAMSSIA
LAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMVDLGLVLHQGSYFRDLWNILDFIV
VSGALVAFAFTSSSRGSSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKN
VLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKEFEKDCRGEYLVYEKDNEVKAQKRE
WKKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYF
VVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNRQSF
QYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFYDASDTYENVLKMFNNVFTSLFSLECLL
KIMAFGVLNYFRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQG
YTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIEEEDDESAITQHNNFR
TFFQALMLLFRSATGEAWHEIMLSCLSGKPCDENSGIKEDECGNEFAYFYFVSFIFLCSF
LGSVPVLGGRGGPAPPLTCVSCSGRIHYRDMYSLLRVISPPLGLGKKCPHRVACKVRPPP
KTDPPKPPQPRRPSPSPRMRFLAPDIHHIYGINIYIMYMDTQPPGMETPGFPRPPRDTAD
KGTWGHGGHGGGVRGDTGPHGAGEAGVSRAEPPVSPACHPRVPAGGADKQQMDAELRKEM
IAIWPNLSPKNLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQNRTPLM
FQRMEPPSPTQEGPPGPDAAPTAEPAARDGDMKESQSWVTQRAQEMFQRTGTWSPERGHP
DDVPNSRPNSQLVEMREMPKDGHSDSDYLPMEGHGRAASMPRLPADTQTIADSSPMKRSA
SLLGHSRARGVRLDDFSLERVPPGEDGQRHHPRRGHRGHRASERSLSRYTDGDTGLGTDL
SVTTQSGDAPAKERDPERGRPKDRRHRHHHHHHHHHHHGGGAGGDRDRGVPPPERHDYGR
PRSRDRRWSRSPSEGREHAAPRQGSSSVSGSPVLSTSGTSTPRRTRRQLPPTPATPRPHV
SYSPAARRPPPPAGPTATRSRRHRCRSTDAPPAPPAAPSPPVGAARRPPGPPGGCRTGTT
RATAPGRGGPGSATPTARRTMTAASGASHGVSRQGAHAAGISRQGAPPRVAARGVGVATH
TAPPPPPAPGVLDEFYHLEEPPPPRGGAAPGTPETPRDPAKLPGEPPGREEPPGRERSPG
GSGMGTGYRHRQQRERAPGTPGTGNRPPTPPEARRRQNRGRRHCMNRNH
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttcggagaggaggtggcggcccgctacgggcccggcggcggcgggagcggc
cccggggcggcggcggggggccggggagcggcgggggggggcccgcggcagggccccccc
ggggcgcagcggctctacaagcagtccatggcccagcgcgcccgcaccatggccctgtac
aaccccatcccggtgcggcagaactgcctcaccgtcaaccgctcgctcttcctcttcagc
gaggacaacgtggtgaggaaatacgccaaaaagatcaccgaatggcctccttttgaatac
atgattttagccaccatcatcgcgaactgcatcgtcctggcgctggagcagcacctgccc
gacgaggacaagacccccatgtcggagcggctggacgacacggagccgtacttcatcggc
atcttctgcttcgaggcggggatcaagatcatcgcgctgggcttcgccttccacaaaggc
tcctacctgcgcaacggctggaacgtcatggacttcgtggtggtgctcacgggcatcctg
gcctcggtgggctcccagttcgacctgcggacgctgcgggccgtgcgcgtgctccggccc
ctcaagctggtctcggggatcccaagtttacaagtcgtgctgaagtccatcatgaaggcg
atgatcccgctgctgcagatcgggctcctgctcttcttcgcgatcctcatcttcgccatc
ataggattagagttttatatgggcaaattccacaccacctgcttcgacctggtcacagac
gagatcaaggtggaggtcccgtgcgggacggacgagccggcgcggatctgccccaacggc
accaagtgcaagaagtactgggaggggcccaactacggcatcacgcagttcgacaacatc
ctcttcgccgtgctcaccgtcttccagtgcatcaccatggaagggtggaccgacctcctc
tactatgtgagggccggcccctcccggtgtccgcctttcccctcccggtgcccgcccgac
tatgcagaattcattttcttgggactctttatgtccgaaatgtttataaaaatgtacggg
ctggggacgcggccttacttccactcgtccttcaactgcttcgactgcgccgttatcatc
ggaagcatcttcgaggtgatctgggccgttgtgaagccgggaacttcctttgggatcagc
gtgctgcgagctctcaggttactgcgcatcttcaaagtcaccaagtactgggcttccctg
cggaacctggtggtgtccctgctcaactccatgaaatccatcatcagcctcctcttcctc
ctcttcctcttcattgtcgtcttcgcccttttggggatgcagctcttcgggggacagttc
aattttgatgacgggacccctcccaccaatttcgacactttcccagcagcaataatgacg
gtgtttcagatcctgacgggagaagactggaatgcggtgatgtacgacgggatcaaatct
cagggtggcgtcaagggcggcatggttttctccgtctacttcattgtcctcaccctcttt
ggaaactacaccctcctgaacgtcttcttggccatcgccgtggacaacttggccaacgcg
caggagctcaccaaggatgagcaggaggaggaggaagccgccaaccagaagctggccctg
cagaaggccaaggaggtggccgaggtcagcccgctgtccgcagccaacatgtccgtcacc
atgaaggagcagcagaagaaccagaaatcctccaagtcggtgtgggagcagcgcacgagc
gagctgcggaagcagaacctgctggcgagccgcgaggcgctctacagcgagctggacccc
gaggagcgctggaaggttccctacgctcgccacctgcgcccggacatgaagacgcacctg
gaccggccgctggtggtggatccgcaggagaaccgcaacaacaacaccaacaagacgcgc
cccggggagcccccgggcgagccccgcttcgggccgctccgcgccgaggagctgcgccgg
cagcagccgccccgttaccccgagcacggcggcggcccccggcccgcggagccccccgcg
ggacccccgggcggccgccggccccgcagcagcagccgggacccggagcgggagcccagc
caggagcgcggctacggcgacggcgagcggcccaaagggcggcaccgcagccgcgacggc
cgcgccgggtccccgccggagcgggagcaccggcggcaccgcgggcaccggagagggccc
gaggagggggaggagggagcccggcccgagcggcggccgcggcaccgggaaggggggcgg
ccgccgcggggagagggcgacggggagcacggggatggcgagcggcggaggcggcaccgg
cacgggccgccgcccggctacgacggcgagggcaggagggacgacaaggagcggcggcac
cggcggaggagggagacgcagccgcccccggcgccgtcgggccccacgctgtccaccacc
cgccccatccagcaggacctggggcgccgggacccccccgtggccgaggacatcgacaac
atgaagaacaacaaactggccacggccgagccccccgcgcccccctccgtgggcaaccac
accccctgcccccccgccggccccccccgccggccccctcccaccgccaaccccccgccc
cccgaaaacagcctggtggtcaccaaccccgggccccccaacaacccctccaaggcgggc
ggcaagcccgagcacacggccgtggacatcccaccccccttcccgccgccccccagcaac
gccctggtccaagtgaacaggaacgccaaccccgagccgctgccccgcaaggaggaggag
gagaagaaggaggaggaaggcgacgggcaggacgagaacggccccaagcccatggtgccc
tacagctccatgttcatcctctccaccaccaacccgttccggcggctgtgccactacatc
gtgaacctgcgctacttcgagatgtgcatcctcatggtcatcgccatgagcagcatcgcg
ctggcggccgaggaccccgtgcagcccaacgccccccgcaacaatgtgctgcgttacttt
gattacgtcttcacgggggtcttcaccttcgagatggtgatcaagatggtggatctgggg
ctggtgcttcaccaaggttcctatttccgggacctgtggaacattctggatttcattgtg
gtcagcggggcactggtggcctttgccttcacgagcagctcacggggcagcagcaaaggg
aaggacatcaacaccatcaagtccctccgcgtccttcgcgtgctccggcctctgaagacc
atcaagaggctgcccaagctcaaggccgtgtttgactgcgtggtgaactcgctgaagaac
gtcctcaacatcctcatcgtgtacatgctcttcatgttcatcttcgccgtggtggccgtg
cagctcttcaagggcaagttcttctactgcaccgacgagtccaaggagttcgagaaggac
tgcaggggcgagtacctggtgtatgagaaggacaacgaggtgaaggcgcagaagcgcgag
tggaagaagtacgagttccactacgacaacgtgctctgggcgctgctcaccctcttcacc
gtctccaccggcgaggggtggccgcaggtcctcaagcactcggtggatgctacatatgag
aaccaagggccgagccccgggtaccgcatggagatgtccatcttctacgtcgtctacttc
gtggtcttccccttcttcttcgtcaacatcttcgtggccttgatcatcatcaccttccag
gagcagggggacaagatgatggaggagtacagcctggagaagaacgagagagcctgcatc
gactttgccatcagcgccaagccgctgacccggcacatgccccagaaccgccagagcttc
cagtaccgcatgtggcagttcgtggtgtcccctcccttcgagtacaccatcatggccatg
atcgccctcaacaccatcgtgctcatgatgaagttctacgatgcctctgacacctacgag
aatgtcctcaagatgttcaacaacgtcttcacctccctcttctccctcgagtgtctcctc
aagatcatggccttcggtgtcctgaattacttccgtgatgcctggaacatcttcgacttc
gtgacggtcctgggcagcatcacagacatcctggtgacggagttcgggaacaacttcatc
aacctgagcttcctgcggctcttccgcgccgcgcggctcatcaagctcctgcgccagggc
tacaccatccgcatcctgctctggaccttcgtccagtccttcaaggccctgccctacgtg
tgcctgctcatcgccatgctcttcttcatctacgccatcatcgggatgcaggtgtttggg
aacatcggaattgaggaggaggatgacgagtcggccatcacccagcacaacaacttccgc
actttcttccaggcgctgatgctgctcttcaggagtgccaccggcgaggcgtggcacgag
atcatgctgtcgtgcctcagtggcaagccgtgcgatgagaactcgggcatcaaggaggac
gagtgcggcaacgagttcgcctacttctacttcgtgtccttcatcttcctctgctcgttc
ctggggtctgtcccggttttggggggccgggggggtcccgcccccccactaacgtgtgtc
tcttgcagcgggcgcatccactaccgggacatgtacagtttgttgcgcgtgatctccccc
cccctgggcctgggcaagaaatgcccccatagggtggcctgcaaggttcgcccccccccc
aaaaccgacccccccaaacccccccagccacgccgcccctcccccagcccccgaatgcgc
ttcctggcgccggatatacatcatatatatggaataaacatatatatcatgtatatggac
acacagccccccggcatggagacccccggcttcccgcggcccccccgggacacagcagac
aaggggacgtggggacatgggggacatggagggggtgtgcgtggggacacgggtccccac
ggggctggcgaggccggggtgtcccgcgcagagccacccgtgtcacccgcgtgtcacccg
cgtgtccccgcaggtggggcggacaagcagcagatggacgcggagctgcgcaaggagatg
atcgccatctggcccaacctgtcccccaaaaacctggacctgctcgtcaccccacacaag
tccaccgacctgacggtggggaagatctacgcggccatgatgatcatggagtattaccgg
cagagcaaggccaagaagctgcaggccatgcgcgaggagcagaaccggacgccgctgatg
ttccagcgcatggagccaccgtcccccacccaggaggggcccccgggaccggacgcggcg
cccacggcggagccggccgcgcgggacggggacatgaaggagagccagtcctgggtcacg
cagcgcgcccaggagatgttccagaggaccggcacctggagccccgagcggggacacccc
gacgatgtccccaacagccgccccaactcccagctggtggagatgcgggagatgcccaag
gatggccactcggacagtgactacttgcccatggaggggcacggccgcgccgcctccatg
ccccggctgcctgccgacacccagaccatcgcggactcgagccccatgaagcgctcggcg
tcgctgctgggccactcccgcgcccgcggcgttcgcctggacgatttctccctggagcgg
gtcccccccggcgaggacggccagcgccaccacccccgccgtggccaccgcggccaccgc
gcctccgagcgctccctcagccgctacaccgacggcgacacagggctgggcacggacctg
agtgtcaccacgcagtcgggggacgcccccgccaaggagcgggaccccgagcgggggcgg
cccaaggaccggcggcaccggcaccaccaccaccatcaccaccaccaccaccacgggggc
ggcgccgggggggaccgcgaccgcggcgtgcccccccccgagcgccacgactacgggcgg
ccccgctcccgggaccgccgctggtcccgctcgcccagcgagggccgggaacacgcggcc
ccccgccagggcagcagctcggtcagcggcagcccggtgctctccacgtccgggaccagc
accccccgccgcacccgccgccagctcccgccgacccccgccacgccgcggccccacgtc
tcctactcgcccgccgcccgccgcccccccccccccgcgggccccaccgcgacgcggagc
cgccgccaccgctgccgctcgacggacgcgccccccgcgccccccgcggcaccgtcaccc
ccggtgggggcggcccgtcgcccccccggcccgcccggcggctgccgaacgggtactacc
cgggccacggcgccgggaaggggcggcccgggctccgcgacccctacagcgagacggacg
atgactgctgctagcggcgcctcccacggcgtgtcgcgacagggcgcgcacgcggccggc
atatcgcgacagggcgctccgccacgtgtcgcggccaggggggtgggagtcgccacccac
accgcacccccccccccgcccgctcccggggttttggatgagttttatcatctggaggag
ccgccgccgccgcgggggggggcggccccggggacccccgagactccccgggaccccgcg
aagctcccgggggagccccccggccgggaggagccgccggggcgggagcggagcccggga
ggctccgggatgggcaccgggtaccgccaccggcaacagcgggaacgggcaccgggaaca
ccgggaacgggcaaccggccccccaccccgcccgaggcacggaggcggcagaaccggggc
cgccgccattgcatgaaccgaaaccattaa
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integrated database retrieval system
