Lonchura striata (white-rumped munia): 110482744
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Entry
110482744 CDS
T05897
Symbol
CDX1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110482744 (CDX1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
110482744 (CDX1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
110482744
NCBI-ProteinID:
XP_021407882
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Position
13:11829093..11841735
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AA seq
259 aa
AA seq
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MYLGYLVDKDTNMYPSPVRHPSLNLSPQNYVPGPPQYSDFASYHHVPGINSDLHHGQPAA
AWGSPYTPAKEDWHSYGTAAPPSTASPGQFGFSPPDFNPIQPPGSGLLPPAISSSVPQLS
PNAQRRTPYEWMRRSIPSTSNNGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAE
LAAALGLTERQVKIWFQNRRAKERKVNKKKLQQQSQPTSTTTPTPPAVSTLGPIGGLCSS
NAPNLVSSSPLTIKEEFMP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgggatatctcgtggataaggacaccaacatgtatcccagcccggtccggcac
cccagcctcaacctcagcccccagaactacgtgccggggccaccgcagtactcggacttc
gccagctaccaccatgtgccggggattaacagcgacctgcaccacgggcagccggcggca
gcctggggctctccctacacccctgccaaggaggactggcattcctatggcaccgccgcg
ccgccctccaccgccagcccgggccagttcggattcagccccccagattttaatcccatt
caacctccgggctctggactcctgcctccagccatcagcagctcggtcccccagctctcc
cctaatgcgcagagacgcaccccatacgagtggatgaggcgcagcattcccagcaccagc
aacaacggcaagaccaggacaaaggacaagtaccgggtggtttacacggaccaccagcgc
ctggagctggagaaggagtttcactacagccgctacatcaccatccgccgcaaggctgag
ctggcggcggccctggggctgaccgagcggcaggtgaaaatctggtttcagaatcggagg
gcgaaggagaggaaggtgaacaagaagaagctgcagcagcagagccagcccaccagcacc
accacaccaaccccaccagctgtcagcaccctgggacccattgggggcctctgcagcagc
aatgcccccaacctcgtctcctcatctccgctgacaatcaaggaagaattcatgccttaa
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