Lonchura striata (white-rumped munia): 110482823
Help
Entry
110482823 CDS
T05897
Symbol
CDH20
Name
(RefSeq) cadherin-20
KO
K06807
cadherin 20, type 2
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
110482823 (CDH20)
Cell adhesion molecules [BR:
lsr04515
]
Cadherins
Major cadherins
110482823 (CDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
110482823
NCBI-ProteinID:
XP_021408013
UniProt:
A0A218V0F0
LinkDB
All DBs
Position
2:60139971..60261663
Genome browser
AA seq
798 aa
AA seq
DB search
MWTSGRMSNAKNLFGLGVSLYFWGLMDLTTTVLSGSARPLTEGQEDNLSDKLHQRMKRSW
VWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQR
LDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYIASVPEMSPVG
TSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSRTGLIRTALMNMDREAKEYYEVI
IQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPISSTVGRVVAKDL
DEGINAEMKYSLVDGDGLDVFDINTDPNYQVGIITVRKPLSFESKKSYTLKVEGANPHLE
MRFLNLGPFRDTTTVHISVEDVDEPPVFEPSIYFVEVPEDVEIGTTIQIISAKDPDVTNN
SIRYSIDRSSDPGRFFYVDITSGALMTARPLDREDISWHNITVLAMELNNPSQVGSVSVT
VKVLDVNDNAPEFARFYEAFVCENAKAGQLIQTVSAIDKDDPQEGQHFYYSLAPEAANNP
NFTLRDNQDNTAWVLTRRSGFRQNEQNTFYLPILISDNGRPVLSSTGTLTVHVCSCDEEG
MVMSCNAEAYVLPVSLSRGALIAILACIFVLLVLVLLILSMRRQRKQPYIIDEEENIHEN
IVRYDDEGGGEEDTEAFDIAAMWNPREAQLVVKNRQDMLPEIESLSRYVPQACVMDNNVH
NYVLTKLYEADMDLWAPPFDSLQTYMFEGNGSVAESLSSLQSVTTDSDQSYDYLTDWGPR
FKKLAEMYGATDNSGALW
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtggacttcaggtagaatgagcaatgcaaagaacttgtttggacttggtgtctccttg
tatttttggggactgatggaccttactacaactgtgctgtcaggaagtgccaggcccctc
actgaagggcaagaagacaacctgtcagacaagctgcatcagcgtatgaagaggagctgg
gtgtggaaccagttttttgttctggaggaatacacaggaactgaccctctctatgtcggg
aagctccactctgacatggacaggggagacggttcaatcaaatacatcctctcaggagag
ggagctggcattgtgttcaccattgatgataccacaggggacattcacgccattcagcga
ctggaccgggaagaaaggtcacagtacaccctcagagcacaggctctggacaggagaaca
ggccggccgatggaaccagagtcagagtttatcatcaaaatccaagacatcaacgacaat
gaacccaagttcctggatggaccttacatagcctctgttccagaaatgtcacctgtgggc
acctctgttatccaggtgacagcgacagatgctgatgacccaacctatgggaacagcgct
agagtcgtatacagtattctccaaggacagccatatttctctgtagactctcggacaggc
ttaattagaacagctctaatgaacatggaccgagaagcaaaagaatattatgaagtgatt
atccaagccaaggatatgggtggacagctgggaggattagctggaacaaccacagtcaac
atcactctctctgatgtcaatgacaatccacccagatttccacagaagcattatcagatg
agtgtgctggagtctgctcccatcagctccactgtgggccgtgtggttgctaaagacctg
gacgaaggcattaatgcagaaatgaaatacagtcttgtggatggagatggactggatgtt
tttgatattaacactgatcctaattaccaagttggcatcatcactgtaagaaagccttta
agttttgagagcaaaaaaagctacaccttgaaggtagagggtgccaaccctcacctggaa
atgcggttcctgaacctgggtcccttccgtgacaccaccactgtccacatcagtgtggag
gacgtggatgagcctcctgtgttcgagcccagcatctactttgtggaagtgcccgaggat
gtggagattggaaccaccatacagatcatttctgccaaggacccagacgtgaccaacaac
tccatcagatattcgattgacaggagcagtgatccaggacggttcttttatgtcgacata
acatcgggagcactgatgactgcaagacctcttgaccgggaggacatttcttggcacaac
atcactgtgttggccatggagctgaataacccctcacaggtgggcagcgtctctgtgaca
gtgaaagtcctggatgtgaatgataacgcaccggagtttgcaagattttatgaagctttt
gtttgtgaaaatgccaaagcaggccagctgattcagacagtgagtgccattgacaaggac
gacccacaggagggtcagcacttctactacagcctggctccagaggcagccaacaacccc
aactttactctaagggacaatcaagacaatacagcgtgggttttgacaaggcgctctggc
ttcagacaaaacgagcagaacaccttttacctgcccatcctgatcagcgacaacgggcgc
ccggtgctgagcagcacaggcacgctgaccgtgcacgtgtgcagctgcgatgaggagggc
atggtgatgtcctgcaatgccgaggcctacgtcctccctgtcagcctgagccgaggggca
ctcattgccatccttgcctgcatctttgtcctgctagtgttggtgctcctcatcctctcc
atgcggcgccagcggaagcagccgtacatcattgacgaggaggagaacatccatgagaac
atcgtcaggtatgatgacgagggtggtggggaggaggacacggaggccttcgacatcgct
gccatgtggaacccgcgggaggcccagctggtggtgaagaaccggcaggacatgctccct
gaaatagagagcctctcccgatacgtgcctcaggcgtgcgtcatggacaacaacgtccac
aactacgtgctcaccaagctctatgaagctgacatggacctgtgggcgcctcccttcgac
tccctccagacctacatgtttgaagggaatggctcggtggcggagtcactcagctcctta
cagtccgtgacaacagactcagaccagagctatgactacctgacggactgggggccgcgc
ttcaagaagctggccgagatgtacggggccacagacaacagcggggctctgtggtaa
DBGET
integrated database retrieval system
