Lonchura striata domestica (Bengalese finch): 110483476
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Entry
110483476 CDS
T05897
Symbol
ITGA10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04510
Focal adhesion
lsr04512
ECM-receptor interaction
lsr04810
Regulation of actin cytoskeleton
lsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110483476 (ITGA10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110483476 (ITGA10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110483476 (ITGA10)
04810 Regulation of actin cytoskeleton
110483476 (ITGA10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
110483476 (ITGA10)
Cell adhesion molecules [BR:
lsr04515
]
Integrins
Integrin alpha subunits
110483476 (ITGA10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
VWA_2
Integrin_A_Ig_3
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
110483476
NCBI-ProteinID:
XP_031362725
LinkDB
All DBs
Position
25:complement(32410..52330)
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AA seq
1265 aa
AA seq
DB search
MWGVRNPGVLLALLLLPGEFPPFAGVGGKLRHGGEDVFGVLGGFFFGVLSPHPFLGTPSA
ALGEGFSLDARRSRLFRGPPESQFGYRVLQRGGDGDKWLLVGAPWDGDGQGDIYKCDVGP
QNSSCAKANLGTGRGGGSSTGHLGMTLVESKDGGFVACAPLWSQECGTSTFSSGRCVRLD
EELQPVGTIAPTAQRCSTYMDIVLVLDGSNSIYPWEEVQAFLGNILARFFIGPGQTQVGV
LQYGEQLVQEWALGQHPTTQSLLEAARNLTRQEGRETRTAMAIREACTQSFSPARGGRPG
AARLLLVVTDGESHDGDELPAALAECDRHNVTRYAIAVLGHYLRRQQDPEDFIREIKSIA
SDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTHGDNESAFELEMSQIGFSIHHLEDGI
LFGMVGAHGWQGGVLEERRRGRVVPAREAFQEEFPLQLKNHAAYLGYSVSSLQLPGGQRL
LVAGAPRFQHKGKVVLFQLDPTGAVTVAQALMGDQIGSYFGSEVLALDLEGDGDSELLLV
AAPTYLGGQSREMGRVYVYRVGQVRGLDPAGSLHPEPSPQDSRFGSALGAVPNLSQDGLA
GAVVGAPLEDEHRGALYVFHIAPGSLLPRYKQRIEAAVLGWSLRYFGISVDGRVDMDGDG
LVDVAVGAQGAAVLLRSRWIIRVSAGVSVEPAAVSVTRRNCRRGGSGAVCLRARICFRGQ
SRARRGPGDVDVDLRYNVSLEERIPGSRAAFDSGGRRLLQRRTELRLGGQSCARVPFHVL
DTSDYLRPLSLSLTWALDAAASAVLDEASPTSVRKLIPFFKDCGNDDECVADLVLKATTD
IMGSRQSPHIVRKGRRRMLVDVELENRGENAYNASLWLHLPGNLHFSSLVLQDPMGVVGV
VHCCHLAVSPMSPWCPRQDPSSVKLECSALGGHRRRCSVGYPVFRSQAKVSFTLELEFSC
SVLLDRAEVTLRATSDSTEATAEDNAVKLSVPIRYEANLFLSRWGWGGEGGHIVMGVTPP
VHPPPPKNSYLQSGGVLEWDVTPLCAPKNTDLQSGGDTSDTNLHRYELPPPGTFIASSSP
EFSTTVKNVTLHMALPALSVTRVLAENASCRLSPPDGGTPRALPVPPEALRHSERLDCSR
SRCRELRCALARLERGGAASVELERSLRGAALGSVKFRSLRIVSSVCLGLGGELLVLEEG
AQCRELELELLRARPVSVSLWILGGSALGGLLLLALLSLGLWRLGFFSHPKPSREEEEEE
EDEEH
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtggggtgtgaggaacccgggcgtgctcctggcgctgctcctgctcccaggggaattt
ccaccctttgcgggtgtcggggggaaactgaggcacggtggcgaggatgtgtttggggtg
ctgggggggtttttttttggggttctgtcccctcaccccttccttgggaccccctcggca
gcgctcggcgagggtttcagcctcgacgcgcggcgctcgcggctcttccgggggccaccg
gagtcccagtttggctaccgggtgctgcagcgggggggagacggggacaagtggctgctg
gtgggggccccgtgggacggggatggccaaggtgacatctacaagtgcgacgtgggaccc
caaaactcctcctgtgccaaggccaacctcggtactgggcggggcggggggagcagcacc
ggccacctggggatgacgctggtggagtccaaggatggggggtttgtggcgtgcgccccg
ctttggtctcaggaatgtggcacctccaccttcagctccggccgctgcgtccggctcgac
gaggagctccagcccgtgggcaccatcgcgcccacagcccagcgttgttctacctacatg
gacatcgtcctggttctggatggctccaacagcatctacccctgggaggaggtgcaggcc
ttccttgggaacatcttggcacgcttcttcatcggccccgggcagacccaggtgggggtg
ctgcagtacggggagcagctggtgcaggagtgggcgctggggcagcaccccacaacccag
agcctgctggaggctgcgcggaacctgacgcggcaggaggggagggagaccaggacggcc
atggccatccgggaggcatgcacccagtccttcagcccggcgcggggcgggcgcccgggg
gccgcgcggctgctgctggtggtgacggacggcgagtcccacgacggcgacgagctgccc
gcggcgctggccgagtgcgaccgccacaacgtcacccgctacgccatcgctgtgctgggc
cattacctgcggcggcagcaggatcccgaggatttcatccgggagatcaaatccatcgcc
agcgaccctgacgagaagtatttcttcaatgtcacggatgaggccgccctcaacgacatc
gtggacgctctgggagatcggatcttcagcctggaaggcacccacggtgacaatgagagc
gccttcgagctggagatgtcccagatcggcttttccatccaccacctcgaggacgggatc
ctcttcgggatggtcggagcccacggctggcaggggggtgtgctggaggagaggcggagg
ggccgcgtggttccagcccgggaagcgttccaggaggaattcccgctgcagctgaagaac
cacgcggcctacctggggtactcggtgtcctcgctgcagctcccgggggggcagcgcctg
ttggtggccggtgcccctcgcttccagcacaagggcaaggtcgtcctcttccagctggac
cccacgggcgccgtgacggtggcccaggcgctgatgggggaccagattggctcctacttc
ggcagcgaggtgctggccctggacctggagggagatggggacagcgagctgctgctggtg
gcagcgcccacctacctggggggccagagcagggagatggggagggtctacgtgtaccgc
gtggggcaggtgagagggctggaccccgcggggtcgctgcaccccgagccgagcccgcag
gattcccggttcggctccgccctgggcgcggtgcccaacctgagccaggacgggctggcc
ggggccgtggtgggggctccgctggaggacgagcaccgcggggctctctacgtgttccac
atcgccccgggctccctcctgccccgctacaagcagcgcattgaggcggcggtgctgggc
tggagcctccggtacttcgggatcagtgtggacggacgggtggacatggacggggacggg
ctggtggacgtggccgtgggggcgcagggggcggccgtgctgctgcggtcccgctggatc
atccgggtgtccgcgggggtgtcggtggagccggcggccgtcagcgtcacccggcgaaac
tgccggcgcggcggctccggcgccgtctgcctccgcgccaggatctgcttccgcggccag
agccgcgcgcggagaggccccggggacgtggatgtggatctccggtacaacgtgtccctg
gaggagcggatcccgggatcccgagccgcctttgactccggcggccgccggctgctgcag
cgccgcacggagctgcggctgggcgggcagagctgcgcccgcgtccccttccacgtcctg
gacacctcggattacctgcggcccctcagcctcagcctcacctgggcgctggatgcggct
gcgagcgcggtgctggacgaggcgtctcccaccagtgtccgcaaactgatcccgtttttc
aaagattgcgggaacgacgacgagtgcgtcgctgacctggtgctcaaggccaccacggac
atcatgggctccaggcagagccctcacatcgtgcggaagggccggaggcggatgctggtg
gatgtggagctggagaaccggggggagaacgcctacaacgccagcctgtggctgcacctg
cctgggaacctccatttctccagcctcgtgctccaggatcccatgggggttgtgggggtg
gtccattgctgccacctggccgtgtccccaatgtccccgtggtgtccccggcaggatccc
agctcggtcaagctggagtgctcagccctgggggggcaccgccggcgctgcagcgtgggc
taccccgtcttccgctcacaggccaaggtgtccttcaccctggagctggagttcagctgc
tccgtcctgctggaccgcgccgaggtcactctcagggccaccagtgacagcaccgaggcc
acagcggaggacaacgcggtcaagctgtccgtgcccatccgctacgaggccaacctgttc
ctgtccaggtggggctgggggggcgaggggggacacatcgtgatgggtgtgaccccccct
gtgcaccccccacccccaaaaaacagctacctgcagagtgggggggtcttagaatgggat
gtgacccccctgtgtgccccaaaaaacaccgacctgcagagtgggggggacacatctgac
accaacctccatcgctacgagcttccacccccgggcaccttcatcgccagctccagcccc
gagttcagcaccacggtcaagaacgtcaccctgcacatggccctgccggcgctgtctgtc
acccgtgtcctggcggagaacgcctcctgcaggctgagcccccccgatgggggcaccccc
agagcgctcccggtgccccccgaggctctgcggcacagcgagcggctggactgctccagg
tctcgctgccgggagctgcgctgcgcgctggcgcggctggagcgcggcggcgccgcctcc
gtggagctcgagcggagcctccgcggcgccgcgctgggctcggtgaaattccggagcctg
aggatcgtcagcagcgtctgtctggggctcgggggggagctcctggtgctggaggagggg
gcgcagtgccgggagctggagctggagctgctccgggcccgcccggtgtcggtgtccctg
tggatcctggggggcagcgccctgggggggctcctgctgctggcgctgctcagcctcggc
ctctggaggctgggattcttctcccacccgaagccctcccgggaggaggaggaggaggag
gaggatgaagagcactga
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