Lonchura striata domestica (Bengalese finch): 110484119
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Entry
110484119 CDS
T05897
Symbol
MNAT1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03022
Basal transcription factors
lsr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110484119 (MNAT1)
09124 Replication and repair
03420 Nucleotide excision repair
110484119 (MNAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110484119 (MNAT1)
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110484119 (MNAT1)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110484119 (MNAT1)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110484119 (MNAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
Motif
Other DBs
NCBI-GeneID:
110484119
NCBI-ProteinID:
XP_021410210
LinkDB
All DBs
Position
5:5621613..5739575
Genome browser
AA seq
309 aa
AA seq
DB search
MDDLGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVELLFVRGAGNCHECDTPLRKSNFRV
QLFEDPAVDKEVEIRKKVLKIYNKREEDFPTLDEYNDFLEEIEEIVFNLTNNVDLENTKK
KMELYQKDNKEVIQKNKLKLTREQEELEEALEVERQESEQRRLFMQKEEQLQQMMKRKNK
QALLDDLESSDLPASLLLAQHKDRSTQLEMQLEKPKPVKPVTFSTGIKMGQQISLAPIQK
LEETLYEYQPLQVETYGPEAPEPEMLGKLGYLTHVRAASPQDLAGGYTSSLACHRALQDA
FSGLFWHPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctgggctgcccgcggtgcaaaaccaccaagtaccgcaacccctcgctgaag
ctgatggtgaacgtctgcgggcacacgctatgtgagagctgtgtggagctgctgtttgtg
agaggggctgggaactgccatgagtgtgacacccccctgaggaaaagcaacttcagggtg
cagctctttgaggatcctgctgtcgacaaggaagtggaaatccggaagaaagtgctgaaa
atatacaataaaagagaggaagactttcccactctagatgaatataatgatttcttggaa
gaaatagaagaaattgtatttaacttgaccaacaatgtggacttggagaacaccaaaaag
aaaatggagctgtatcaaaaggataacaaagaagtcattcagaagaataagctaaaactg
acgcgggagcaggaagagctggaggaggctctggaggtcgagcggcaggagagcgaacag
aggcggctcttcatgcagaaggaagagcagctacagcagatgatgaaaaggaagaataaa
caggcactcctggatgatctggagagctctgatcttcctgcctctctgctcttagctcag
cataaggacagatctactcagctagaaatgcagctggaaaaacccaaacctgtcaaacca
gtcacgttttccactggcatcaaaatgggtcagcaaatttcattagctcccattcaaaag
ttagaggaaactttgtatgaatatcagcctctgcaagtggagacatatggcccagaagct
ccagagcctgaaatgttgggaaagctggggtacctcacccacgttcgagccgcctctccg
caggacctggctgggggctacacgtcctccctggcttgtcaccgggccctgcaggacgct
ttcagcgggctcttctggcaccccagctag
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