Leptospira santarosai: LSS_19820
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Entry
LSS_19820 CDS
T03999
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lst
Leptospira santarosai
Pathway
lst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LSS_19820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lst03019
]
LSS_19820
03400 DNA repair and recombination proteins [BR:
lst03400
]
LSS_19820
Enzymes [BR:
lst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSS_19820
Messenger RNA biogenesis [BR:
lst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LSS_19820
DNA repair and recombination proteins [BR:
lst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LSS_19820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
RQC
ResIII
Cas3-like_C_2
NrdJ_rel_C
SocA_Panacea
Motif
Other DBs
NCBI-ProteinID:
EKT85007
UniProt:
K8Y2V8
LinkDB
All DBs
Position
I:3359789..3361654
Genome browser
AA seq
621 aa
AA seq
DB search
MNSKQNDPILNLESSLKEIWGMSRFRTGQKESIESVLNGKDTLVILPTGGGKSLVYQLPA
VLEGSSLTLVISPLIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILSRAATGKIRILY
LSPEKALSRQVFEILPKLPLDRIAVDEAHCVSQWGHDFRPEYRKLHELRDKYKRPIPIVA
LTATATPKVIQDISDSLGLKDPTLIKGSFYRENLRFSVRFPQNETSKENELLKLLIRGNF
QKTENGKAIIYCATRQKVESIYNFLKKNGFKVGKYHAGRTDSSREKTQNGYSIGKTNVLV
ATNAFGMGLDNPNVRLIVHYQIPASLESYYQEAGRAGRDGKSSNCVLFYHPADLVTQNFI
IGKENNRKGGVTLLSFIKEYAISNGCRQQILCSYFGEEIESCKTCDLCSEKESPNSNERD
QFFERETIKKQKQEEKERYDFSEDELRTIEQVLEQIPGKFGKRMIGGVLRGSRSNEILRK
KLDRLVGYGSLRSIPEEAILKILDEWIAKKKVKIVGDKYPKLILASTVIVKTPRRKKEPD
TDGTQKILSAKNVIQELKNFRDREARRRKWKKFMVLQNPVIVQIAKVMPTTPEELSLIKG
MGSAKVEKFGNDILKILEKWK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaaacaaaacgatcctattctaaatttagaatcctcccttaaggaaatttgg
gggatgtcgcggtttcgcaccggtcaaaaggaatcgatcgaatccgttttgaacggaaaa
gatacgttagttatccttccaaccggagggggaaaatcgctcgtctatcagcttcccgcg
gttttagagggatcctccctaacgctcgttatttcccctttaatcgcccttatgaaagat
caagtagattctctcaaagcgaaaggaatcgccgcggaatactgcaattccactcaggac
gacctggaacagcttagaattttaagtagagcggcgacgggtaaaattcgaattctatat
ctctctccggaaaaagccctgagtagacaggtgttcgaaattctcccgaaactccctctg
gacaggatcgctgtcgacgaagcgcactgcgtatctcagtggggacacgattttagaccg
gaatatcgaaagctccacgaacttagggataaatacaaacgcccgattccgattgttgcg
ttaaccgccacggcaactcccaaagtcatacaagacatatccgattctctcggactcaaa
gatcccactttgatcaaaggaagtttttacagggaaaatctacgcttctccgtacggttt
cctcaaaacgaaacttcaaaagagaacgagctcttaaaacttttgatccgaggaaacttt
caaaaaacggaaaacggaaaggcgattatttactgcgctaccagacaaaaggtggaatcg
atttacaattttctaaagaaaaacgggtttaaagtcggcaaataccacgcgggcagaacc
gattcgagtcgggaaaaaactcaaaacggatatagtatcggaaaaacgaacgtgcttgtg
gcgactaacgcgttcggtatgggtttggacaatccgaacgttcgtttgatcgttcattat
caaatccccgcgtctctggaaagttattaccaagaagcgggaagagcgggaagggatgga
aagtcttcgaactgtgtccttttttaccatcccgccgatctcgtaacccaaaatttcatt
atcggaaaagaaaataatcggaagggaggagtaacgttactctcctttataaaagaatac
gcaatctccaacggatgcagacaacaaattctttgttcctacttcggcgaagaaatcgaa
tcctgtaaaacctgcgacctctgttcggaaaaagaatccccaaattccaacgaaagagat
caattttttgaaagagaaacgatcaaaaaacaaaaacaggaagaaaaagaaagatacgac
ttttccgaagacgaactgagaacaatcgaacaagttttagaacagattcccggtaaattc
ggtaaaaggatgatcggcggcgttttacgaggctccaggtcgaacgaaattctgagaaag
aaattggatcggttagtcggatacggttccttacgttcgattccggaagaagcgatttta
aaaattttggacgaatggattgcgaaaaaaaaagtaaaaatcgtaggagacaagtatccg
aaactcatcctcgcatcgaccgtaattgttaaaactccgagaagaaaaaaagaaccggat
accgacggaacccagaaaatcctttccgcaaaaaacgttattcaagaactgaaaaacttc
cgcgatagagaagcaagaagaaggaaatggaaaaaatttatggtacttcaaaacccggtg
atcgttcaaatcgcaaaggttatgccgacaactccggaagaattatctctcataaaagga
atgggttccgctaaagttgaaaaattcgggaacgatattttgaaaatcctagaaaaatgg
aaatag
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