Leuconostoc suionicum: A6B45_08760
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Entry
A6B45_08760 CDS
T05489
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lsu
Leuconostoc suionicum
Pathway
lsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6B45_08760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsu03021
]
A6B45_08760
03400 DNA repair and recombination proteins [BR:
lsu03400
]
A6B45_08760
Enzymes [BR:
lsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6B45_08760
Transcription machinery [BR:
lsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6B45_08760
DNA repair and recombination proteins [BR:
lsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6B45_08760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Halo_prof
Motif
Other DBs
NCBI-ProteinID:
API72766
LinkDB
All DBs
Position
complement(1769597..1773205)
Genome browser
AA seq
1202 aa
AA seq
DB search
MVGHLVKYGKHRTRRSYASIKEVLDVPNLIEIQTASYQWFLNDGIKEMFGDIMPIDDFQG
TLSLEYVDYQLMEPKYNIDEAREHDANYSAPLHVTLRLTNHETGEIKSQDVFFGDFPLMT
EQGTFIINGAERVIVSQLVRSPGIYYNQTTDKNGRPHFGTTVIPNRGAWLEYETDAKGIA
NVRIDRTRKLLMTELVRALGFGSDSDIIDIFSDQYDALNMTLEKDVHKDMSDSRVEEALK
DVYERLRPGEPKTADSSRALLVARFFDPKRYDLASVGRYKINKKLALKTRLLNQTLAETL
ADPDSGEILAEKGTLVDKEVISKLTPYLDREDFKTTTYTPSGDAVLEEPVTLQKIKIESP
ENPEKTLLLIGNGHIDEDDRTVRPADILAGMNYFLNLQEGVGHVDDIDHLGNRRIRSVGE
LLQNQFRIGLTRMERVVRERMSIQDANTVTPQQLINIRPVVAAVKEFFGSSQLSQFMDQT
NPLGEMNHKRRLSALGPGGLTRDRAGVEVRDVHYTHYGRIDPIETPEGPNIGLINSLATY
GRINKYGFVETPYRRVDWTTHKVTDKIDYLTADEEDNYIVAQANSPLNEDGSFVHSTVMA
RFGEENIETPIDRIDYMDVSPKQVVSVGTAAIPFLENDDSNRALMGANMQRQAVPLLDPH
SPLVGTGIEYKAAHDSGVAMIARASGEVEYVDGRQIRVRREDGQLDTYELMKFRRSNGGK
NYNQKPIVHVGEHIEADEVLADGPSMEQGELALGQNPLIAFMTWQGYNFEDAIVLNERLV
REDVYTSIHIEEYDSEARDTKLGPEEMTREIPNTGEDQLKDLDADGIIRVGAEVHDGDIL
VGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGVVQNVRIYTPENGDELA
PGVNMMVRVYIAQKRKIQVGDKMAGRHGNKGTVSVVVPEEDMPYMPDGTPIDILLSPMGV
PSRMNIGQVLELHLGFAAKKLGIHVASPVFDGASDDEIEMALREAGLPQDGKSVVYDGRT
GEAFDKRVGVGVMHYMKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAYTLQEILTYKSDDVAGRVKVYESIIKGEPIPRPGVPESFRVLVKELQALGLDM
QVLDGAGDEVELRQMDEDDSILPVDALEKLARTNPDLLNKDDEEVTAAFSKVEEQSQTFE
EK
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtggtaggacatttagtaaaatacggtaagcaccgtactcgtcgttcatatgctagcatc
aaagaagtacttgatgtgccgaatttgattgaaattcaaacggcatcatatcaatggttt
ttgaacgatggtatcaaggaaatgtttggcgacatcatgccaattgatgatttccaaggt
actttatctttggaatacgttgattatcaattgatggaaccaaaatataatattgacgaa
gcacgtgagcatgatgcaaactattctgcaccattacacgttacattgcgtttaacgaac
cacgaaactggtgaaattaagtcgcaagacgtattcttcggtgatttcccattaatgaca
gagcaaggaacgttcattattaatggagcagagcgagttatcgtttcacagcttgttcgg
tcacctggtatttattataatcagacaactgataaaaatggacgtccgcattttggaacg
actgttatacctaaccgtggcgcatggttagagtatgaaacagatgccaagggcattgct
aacgtacgtattgatcgtacgcgtaagttgctaatgactgaattagtacgtgcacttgga
tttggttctgattcagacattattgatattttttcagatcaatatgatgcattgaacatg
acccttgaaaaagatgtccataaggatatgtcagattctcgtgttgaagaagcattgaag
gacgtatacgaacgtttgcgtccaggtgaaccaaagacagctgattcgtcgcgtgcacta
ttagttgctcgtttctttgatccaaagcgttatgatttagcgtctgttggccgttataag
attaataaaaaactggcacttaagacacgtttgttaaaccaaaccttagcggaaacattg
gctgaccctgattctggtgaaattcttgctgaaaaaggtacgttagttgataaggaagtt
atctctaaattaacaccatatttggatcgtgaagactttaagacaacaacatatactcca
tcaggtgatgctgttcttgaagaacctgtaacccttcaaaaaatcaaaatcgaatctccc
gaaaacccagagaagacattattgttgattgggaatgggcacattgatgaagatgatcgt
acagtacgtccagctgatatcttggcagggatgaactacttcttgaacttgcaagaaggt
gttggccatgttgatgatattgaccacctgggtaaccgtcgtatccgttccgttggtgaa
ttgttgcaaaatcaattccgtattggattgacacgtatggagcgtgtcgttcgcgagcgc
atgtcaattcaagatgccaacacggttacaccacaacaattgattaatattcgacctgtt
gtcgctgctgttaaagaattcttcggatcatcacagttgtcacagtttatggatcagact
aatcctttgggtgaaatgaaccacaagcgtcgtctgtcagctcttggacctggtggtttg
actcgtgatcgcgctggtgttgaagttcgagatgttcattatacacactatggtcgtatt
gaccccattgaaacgccagaaggtcctaacattgggttgattaactcgttggccacttat
ggtcgcattaataaatatggtttcgtcgaaacaccataccgccgtgttgattggacaact
cataaggttacagataaaattgattatttgacagccgatgaagaagataactatattgtt
gctcaagccaactcaccattgaatgaagatggtagctttgtgcacagcacggttatggct
cgttttggtgaagaaaacattgaaacacccattgatcgcattgactacatggacgtttcg
ccaaagcaagttgtttctgttggaacagctgctattccgttcttggaaaacgatgattcc
aaccgcgctttgatgggtgccaacatgcaacgtcaggcagtgcctttgcttgatccacat
tcaccattagtaggaacaggaattgagtataaagcagctcacgattctggtgttgcgatg
attgcacgcgcatctggtgaagttgagtatgtggacggtcgccaaatccgggttcgccgt
gaagatggtcaactagacacttacgaattaatgaagttccgccgttcaaacgggggtaaa
aactataaccaaaagccaatcgtacatgttggtgagcacattgaagctgatgaagttttg
gcggacggcccttcaatggaacaaggcgaattagccttggggcaaaatccattaattgct
ttcatgacttggcaaggatataacttcgaagatgccattgtcttaaatgaacgtttggtt
cgtgaagatgtttatacttcaattcacatcgaagaatacgattcagaagcacgagacaca
aaacttggaccggaagaaatgacccgtgaaattcctaatactggtgaagatcagttgaag
gatttggatgcggacggtattattcgtgtcggtgctgaagttcatgatggtgacatttta
gttggtaaggtaacacctaagggtgttactgaactttctgctgaagaacgtttgttacat
gctatttttggtgaaaaagcgcgtgaagtacgtgatacatcattacgtgttcctcatggt
ggtggcggtgtcgttcaaaacgttcgtatttatacacctgaaaatggtgatgaattagca
cctggtgtcaacatgatggttcgtgtttacattgcgcaaaagcgtaaaattcaagtcggt
gataagatggctggtcgtcatggaaacaagggaactgtttctgttgttgtgccagaagaa
gatatgccatatatgcctgatggaacacctattgacattctattgtcacccatgggtgtg
ccatcacgtatgaatattgggcaagtacttgagttacacttaggatttgctgccaagaaa
cttggtattcatgttgcttcacctgtttttgatggtgcaagtgatgatgaaattgaaatg
gctttgcgtgaagctggattacctcaagatggtaagtcagttgtatatgatggccgtaca
ggtgaagctttcgataagcgtgtcggtgttggtgtcatgcattatatgaaactagcgcac
atggttgatgataagattcacgcacgttcaatcggcccttactcacttgttacgcaacag
cctttgggtggtaaagcacaattcggtggacagcgtttcggtgaaatggaagtatgggcc
ttggaagcttatggtgccgcttataccttgcaagaaattctgacttataagtcagatgat
gttgctggtcgtgttaaggtttatgaatcaattatcaagggtgaaccaattccacgtcct
ggtgttcctgagtccttccgtgtcttggtcaaggaattacaagctcttggattggatatg
caagtattggatggtgcaggtgatgaagttgaattacgtcaaatggatgaagatgattca
attttgcctgtcgatgcacttgaaaagttagcccgtacaaatcctgatctgttaaacaaa
gatgatgaagaagttactgcagccttctctaaggttgaagaacaaagtcaaacattcgaa
gaaaaataa
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