Lactuca sativa (garden lettuce): 111876771
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Entry
111876771 CDS
T05352
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111876771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111876771
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111876771
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111876771
BRITE hierarchy
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
PHD_4
Motif
Other DBs
NCBI-GeneID:
111876771
NCBI-ProteinID:
XP_023729106
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Position
4:53090902..53092705
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AA seq
330 aa
AA seq
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MDFDHFECVSTSDELNEDEIPYHHHRHQHQHRQNSYQNLQNSSSKAHYVNVVPSKINHTP
SVYELLECPVCTNSMYPPIHQCHNGHTLCSTCKTLVNNRCPTCRQELGDIRCLALEKVAE
SLELPCKYSSLGCHGIFPYYSKLKHEALCNFRPYSCPYAGSECSVVGEIKYLVAHLRDDH
KVDMHSGCTFNHRYVKSNPREVDNATWMLTVFNCFGQYFCLHFEAFQLSMAPVYMAFVRF
MGDENDARNYSYSLEVGGNGRKLVWEGTPRSIRDGHRKVRDSHDGLIIQRSMALFFSGGD
RKELKLRVTGRIWKEPLNPDGDTCIPNLCS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgatcactttgaatgcgtttcaacatcggacgaattaaatgaggacgagatc
ccataccatcatcatcgtcatcaacatcaacatcgtcaaaacagctatcaaaatctccag
aattcatcatcaaaagctcactatgttaatgtcgttccttccaaaattaatcacaccccc
agtgtttacgagcttctcgaatgccctgtttgtaccaattcaatgtaccctccaatacat
cagtgtcacaatggtcacacgctttgttccacttgtaaaacacttgtgaacaacaggtgt
ccgacttgcagacaagaactcggtgatataagatgtctagctttggaaaaagttgcagaa
tccctcgaattgccatgcaaatacagctcactcggttgccatggaatctttccttactac
agtaagctaaagcatgaagctttatgcaatttcaggccatatagctgcccttatgccgga
tcagagtgttcggttgttggggaaatcaagtatttagtcgctcatttaagagatgatcat
aaagtcgacatgcactctggatgcactttcaatcaccgatatgtcaagtccaatcctcgc
gaagttgacaatgccacgtggatgctaacagttttcaattgttttgggcagtatttttgt
ctccattttgaagcgtttcagctgagtatggctccggtttacatggcgtttgtgaggttc
atgggagatgaaaatgatgcccggaattacagttacagtttggaggtgggagggaatggc
cggaaactggtttgggagggaaccccacgaagcattagagatggtcaccggaaagttagg
gacagccatgatggactcataatacagcggagtatggctcttttcttctctggtggtgat
cggaaagagctcaagctgagagttactggtcggatttggaaagaacctttgaatcccgat
ggtgacacatgcattccaaacctatgtagttag
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